Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313C04f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    26   0.88 
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   4.7  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.8 bits (54), Expect = 0.88
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 418 PDCLMVYKYISIWPLCPKSN*TLQKIMSANVT 513
           P C+  Y Y ++ PL   +N   Q++  ANV+
Sbjct: 238 PGCVAPYGYHNLMPLSTDANLFSQEVQRANVS 269


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -2

Query: 184 SAVKHSSPKRLGQPICSKTVEISTSCLKEGAGTYLLGDVNGLWLVTTQY 38
           S  +  S ++L QP+     +  ++   E + TY L D++    V TQY
Sbjct: 142 SPQQQQSSQQLQQPLTILVPKNLSNSQGENSVTYTLDDLSNTVPVNTQY 190


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,757
Number of Sequences: 2352
Number of extensions: 11887
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)