Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313C04f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83239-6|CAB05803.1|  324|Caenorhabditis elegans Hypothetical pr...    31   0.50 
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p...    28   3.5  
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p...    28   3.5  
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p...    28   3.5  
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr...    28   3.5  
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase...    28   3.5  

>Z83239-6|CAB05803.1|  324|Caenorhabditis elegans Hypothetical
           protein T09F5.10 protein.
          Length = 324

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 473 DLGHKGHILIYLYTIRQSGVRVSTDIDYAGIHITQA 366
           D GHK   + Y+ T     + +  D+D++GI +T A
Sbjct: 138 DKGHKAVNVTYISTFNSKDIIIPEDLDFSGITVTDA 173


>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
            protein F31B12.1c protein.
          Length = 1895

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 133  KTVEISTSCLKEGAGTYLLGDVNGLWLVTTQYRMGC-DLVY 14
            + + I   C++E +       VN +W  TTQ R+ C DL +
Sbjct: 1435 EVIGIHNDCVREKSKVVQRNSVNPIWNHTTQLRIACVDLAF 1475


>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
            protein F31B12.1b protein.
          Length = 1868

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 133  KTVEISTSCLKEGAGTYLLGDVNGLWLVTTQYRMGC-DLVY 14
            + + I   C++E +       VN +W  TTQ R+ C DL +
Sbjct: 1435 EVIGIHNDCVREKSKVVQRNSVNPIWNHTTQLRIACVDLAF 1475


>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
            protein F31B12.1a protein.
          Length = 1898

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 133  KTVEISTSCLKEGAGTYLLGDVNGLWLVTTQYRMGC-DLVY 14
            + + I   C++E +       VN +W  TTQ R+ C DL +
Sbjct: 1435 EVIGIHNDCVREKSKVVQRNSVNPIWNHTTQLRIACVDLAF 1475


>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical protein
            F31B12.1c protein.
          Length = 1895

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 133  KTVEISTSCLKEGAGTYLLGDVNGLWLVTTQYRMGC-DLVY 14
            + + I   C++E +       VN +W  TTQ R+ C DL +
Sbjct: 1435 EVIGIHNDCVREKSKVVQRNSVNPIWNHTTQLRIACVDLAF 1475


>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical protein
            F31B12.1b protein.
          Length = 1868

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 133  KTVEISTSCLKEGAGTYLLGDVNGLWLVTTQYRMGC-DLVY 14
            + + I   C++E +       VN +W  TTQ R+ C DL +
Sbjct: 1435 EVIGIHNDCVREKSKVVQRNSVNPIWNHTTQLRIACVDLAF 1475


>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical protein
            F31B12.1a protein.
          Length = 1898

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 133  KTVEISTSCLKEGAGTYLLGDVNGLWLVTTQYRMGC-DLVY 14
            + + I   C++E +       VN +W  TTQ R+ C DL +
Sbjct: 1435 EVIGIHNDCVREKSKVVQRNSVNPIWNHTTQLRIACVDLAF 1475


>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
            PLC210 protein.
          Length = 1898

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 133  KTVEISTSCLKEGAGTYLLGDVNGLWLVTTQYRMGC-DLVY 14
            + + I   C++E +       VN +W  TTQ R+ C DL +
Sbjct: 1435 EVIGIHNDCVREKSKVVQRNSVNPIWNHTTQLRIACVDLAF 1475


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,465,911
Number of Sequences: 27780
Number of extensions: 269791
Number of successful extensions: 496
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)