Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313C02f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55418| Best HMM Match : GWT1 (HMM E-Value=1.5) 30 1.3
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_52408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_58268| Best HMM Match : Extensin_2 (HMM E-Value=0.002) 28 4.1
SB_39819| Best HMM Match : Extensin_2 (HMM E-Value=1) 28 4.1
SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1) 28 5.4
SB_12810| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_45611| Best HMM Match : p450 (HMM E-Value=0) 27 7.1
SB_38351| Best HMM Match : PSI (HMM E-Value=0.046) 27 7.1
SB_40674| Best HMM Match : Extensin_2 (HMM E-Value=0.19) 27 7.1
SB_33746| Best HMM Match : MAM (HMM E-Value=8.4e-13) 27 7.1
SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09) 27 9.4
SB_32721| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_55418| Best HMM Match : GWT1 (HMM E-Value=1.5)
Length = 260
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 236 W*AKSMVFLLPFSIRRFTASLITSPFFSFRYSEHLAIAVSYSPMT 102
W + +F++ SI + A+L F F H+ AV+YS T
Sbjct: 127 WQSSRFMFIMRLSILSYAAALFHDQGFEFSLGLHILAAVAYSVRT 171
>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 115 YETAIAKCSEYLKEK--KGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFP 282
Y + I K E+ KEK KG+ K R E GKR A +D E +K +FP
Sbjct: 261 YPSLIDKLQEHEKEKELKGKRKKSKTSRSPEKGKREEEKDALLKQEEDEIERMKQFFP 318
>SB_52408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/63 (22%), Positives = 28/63 (44%)
Frame = +3
Query: 297 DLHRADCQAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSLLQDH 476
DLH + Q +Q G + + + QQ ++ Q+Q QQ+ L + + + L
Sbjct: 558 DLHEEEVQHQQQFGLQEQSLGQEQRKQQQQLQQQQQQKQQQQLQKKQQKQSSMEEKLSSE 617
Query: 477 VHR 485
+ +
Sbjct: 618 IEK 620
>SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 389 SVTPKTKPARKSPGSLPPCWKTTEFTSRSCP 481
S++P + R S GSL P +T+ TSRS P
Sbjct: 179 SISPASPALRSSLGSLAPTSRTSTPTSRSTP 209
>SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 145 YLKEKKGEVIKEAVKRLIENGKRNTMDFAY 234
+ +E+ GE EA KRLI+ GK+ M Y
Sbjct: 676 FREEEDGESFAEAKKRLIKQGKQQIMFLLY 705
>SB_58268| Best HMM Match : Extensin_2 (HMM E-Value=0.002)
Length = 458
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P TK PP K T + R CPP T T
Sbjct: 136 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 169
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P TK PP K T + R CPP T T
Sbjct: 150 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 183
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P TK PP K T + R CPP T T
Sbjct: 164 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 197
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P TK PP K T + R CPP T T
Sbjct: 178 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTRCT 211
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P TK PP K T + R CPP T T
Sbjct: 220 PLTKCTYYRKRRCPPLTKCTNYRKRRCPPLTRCT 253
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P TK PP + T + R CPP T T
Sbjct: 290 PLTKRTNYRKKRYPPLTRCTNYRKRRCPPLTRCT 323
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P T+ PP K T + R CPP T T
Sbjct: 122 PLTRCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 155
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P TK PP + T + R CPP T T
Sbjct: 192 PLTKCTNYRKRRCPPLTRCTNYRKRRCPPLTKCT 225
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P TK PP + T + R CPP T T
Sbjct: 234 PLTKCTNYRKRRCPPLTRCTNYLKRRCPPLTRCT 267
>SB_39819| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 259
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P TK PP K T + R CPP T T
Sbjct: 189 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTRCT 222
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P TK PP K T + R CPP T T
Sbjct: 147 PLTKCTNYLKRRCPPLTKCTNYRKRRCPPLTRCT 180
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P TK PP + T + R CPP T T
Sbjct: 35 PLTKCTNYRKRRCPPLTRCTNYRKRRCPPLTRCT 68
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P TK PP + T + R CPP T T
Sbjct: 161 PLTKCTNYRKRRCPPLTRCTNYRKRRCPPLTKCT 194
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P T+ PP K T + R CPP T T
Sbjct: 175 PLTRCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 208
>SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1)
Length = 432
Score = 27.9 bits (59), Expect = 5.4
Identities = 27/117 (23%), Positives = 51/117 (43%)
Frame = +3
Query: 153 GKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAHKQ 332
G+ R G RE SDR+++ E R D+G G+R+ R D AH
Sbjct: 151 GESSRIRSGDREKSDREKEREKERRRRRHEDEG-SGDRR----------RERRDKDAHDP 199
Query: 333 KGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSLLQDHVHRGQTVPE 503
+ P R + D K ++ ++ ++S L+ R+ +++ L + + + + E
Sbjct: 200 EDPKRREKDDKKKSRERSKG--DEEHTKDSKLDEEDRIRRREKELLETLKQEEEAVE 254
>SB_12810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 546
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +1
Query: 115 YETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQ---LWTKDGKEIVKSYFPI 285
Y + KC Y+ + +G ++ + + KR M + LWT ++I K Y
Sbjct: 456 YPAGLTKCLSYVADDRGRALRLVLTKT--EAKRIPMLNRPEEGFLWTSTQQQITKGYESA 513
Query: 286 QFRVIFTEQTVKLI 327
R+ + T +++
Sbjct: 514 HIRLARNDSTTRIV 527
>SB_45611| Best HMM Match : p450 (HMM E-Value=0)
Length = 847
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 109 GEYETAIAKCSEYLKEKKGEVIKE-AVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 285
G ++ A +K+K +VI A+K + ++F + WT ++ P+
Sbjct: 402 GTFKKAKRVIKHAVKDKSSDVIDRWAIKEALA---LQPVEFGGRPWTVSFDLALRGERPL 458
Query: 286 QFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKD 405
F + VKL K H ALK+ Q+ + ++ ++++
Sbjct: 459 VFEDY--GRHVKLHRKMGHRALKVYSQKKYQQVIIQEAEE 496
>SB_38351| Best HMM Match : PSI (HMM E-Value=0.046)
Length = 236
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +2
Query: 380 KLHSVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNS 496
K+H P +P S PP +F PP N+
Sbjct: 133 KIHKKKPSARPKPADASSAPPIQPAVDFKPGVAPPTVNA 171
>SB_40674| Best HMM Match : Extensin_2 (HMM E-Value=0.19)
Length = 291
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 392 VTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
++P TK PP + T + R CPP T T
Sbjct: 1 MSPLTKRTYYRKKRYPPLTRCTNYRKRRCPPLTRCT 36
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 398 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST 499
P TK PP + T + R CPP T T
Sbjct: 226 PLTKCTNYRKRRCPPLTRCTNYLKRRCPPLTKCT 259
>SB_33746| Best HMM Match : MAM (HMM E-Value=8.4e-13)
Length = 618
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -1
Query: 443 TGVNFQE--TFLLVLSLESPNAILLWFCWSINLRA*WSLLFMSLTVCSVKITLNWMGK*D 270
TGV F E + L L S +++ +++ ++ LRA ++LLF T +L + G D
Sbjct: 517 TGVQFDEFAVYCKPLELASVDSMYIFYKGALGLRANYTLLFPDKTWSYYWTSLEYSGLLD 576
Query: 269 L 267
L
Sbjct: 577 L 577
>SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09)
Length = 916
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +2
Query: 380 KLHSVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNS 496
K+H P +P S PP +F PP N+
Sbjct: 845 KIHKKKPSARPKPADVSSAPPIQPAVDFKPGVAPPTVNA 883
>SB_32721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 637
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +1
Query: 145 YLKEKKGEVIKEAVKRLIENGKR 213
++ KK +IKEA+KR+++N +R
Sbjct: 175 FVDGKKLRMIKEAIKRILKNNRR 197
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.131 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,291,005
Number of Sequences: 59808
Number of extensions: 369356
Number of successful extensions: 1296
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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