Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313C01f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1516 - 34122205-34122348,34122430-34122534,34122878-341230... 122 2e-28
01_06_1150 + 34910941-34911010,34911611-34911738,34912025-349121... 122 2e-28
06_03_0198 - 17797574-17797717,17797995-17798099,17798509-177986... 121 4e-28
09_02_0285 + 6894899-6895114,6896197-6896422,6896889-6896992,689... 115 2e-26
02_01_0154 + 1078561-1078630,1078758-1078885,1079016-1079120,107... 114 5e-26
01_06_0129 - 26770543-26770720,26774592-26774719,26774829-267749... 113 8e-26
02_02_0339 + 9115297-9115366,9116280-9116407,9117537-9117641,911... 101 5e-22
07_03_1012 + 23295976-23296264,23296475-23296548,23296972-232969... 83 1e-16
01_05_0633 + 23840427-23840562,23840699-23840768,23840846-238409... 73 1e-13
07_01_0481 - 3621798-3621926,3622572-3622660,3622780-3622933,362... 73 2e-13
05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960 73 2e-13
03_06_0260 - 32717142-32717270,32717743-32717831,32717950-327180... 73 2e-13
01_07_0028 - 40588611-40588718,40588812-40588901,40589966-405901... 69 2e-12
02_05_0555 - 29937973-29938395,29938509-29938790 64 5e-11
04_04_0902 - 29262611-29262673,29262796-29262909,29262995-292631... 56 2e-08
01_01_1187 + 9444742-9445317 51 6e-07
10_08_0755 - 20329127-20329189,20329276-20329389,20329465-203296... 50 1e-06
09_02_0429 + 9306862-9306970,9307834-9307942,9308538-9308616,930... 49 2e-06
08_02_0468 - 17505905-17506002,17506295-17506424,17506662-175067... 49 2e-06
10_08_0197 + 15666873-15666916,15667098-15667177,15667490-156676... 48 3e-06
03_01_0159 + 1298002-1298070,1298181-1298264,1300354-1300506,130... 47 1e-05
10_02_0151 + 5895708-5895736,5896291-5896403,5897956-5898064,589... 46 2e-05
06_03_1005 + 26837047-26837093,26837644-26837731,26837854-268379... 45 3e-05
01_06_0222 - 27662122-27662159,27662251-27662341,27662760-276628... 45 4e-05
02_05_0558 - 29950120-29950319,29951213-29951579,29952067-29952372 44 6e-05
12_02_1249 - 27331801-27331896,27331984-27332072,27334020-273340... 42 3e-04
05_05_0110 + 22470869-22470920,22471044-22471146,22473261-224733... 42 4e-04
01_06_1289 - 36010924-36011001,36011441-36011518,36012321-360124... 42 4e-04
02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670 40 0.001
03_06_0673 - 35446537-35446629,35447001-35448548 30 1.3
07_03_1193 - 24702135-24702421,24702835-24703160,24703240-247039... 29 2.3
03_03_0241 - 15757331-15757423,15757536-15757643,15758487-157587... 28 4.0
04_04_0864 - 28852252-28854582 27 6.9
>04_04_1516 -
34122205-34122348,34122430-34122534,34122878-34123005,
34124003-34124072
Length = 148
Score = 122 bits (294), Expect = 2e-28
Identities = 55/66 (83%), Positives = 58/66 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY AR W
Sbjct: 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>01_06_1150 +
34910941-34911010,34911611-34911738,34912025-34912129,
34912525-34912668
Length = 148
Score = 122 bits (293), Expect = 2e-28
Identities = 55/66 (83%), Positives = 58/66 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY AR W
Sbjct: 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRPKYETTARSW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>06_03_0198 -
17797574-17797717,17797995-17798099,17798509-17798636,
17799444-17799513
Length = 148
Score = 121 bits (291), Expect = 4e-28
Identities = 54/66 (81%), Positives = 58/66 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY AR W
Sbjct: 82 GSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARGW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>09_02_0285 +
6894899-6895114,6896197-6896422,6896889-6896992,
6897121-6897239,6897445-6897634
Length = 284
Score = 115 bits (277), Expect = 2e-26
Identities = 52/66 (78%), Positives = 57/66 (86%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALTISKVLLSI SLL DPNPDDPLVPEIA +YK+ R +Y E AR W
Sbjct: 82 GSICLDILKEQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHVYKSQRPRYEETARAW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>02_01_0154 +
1078561-1078630,1078758-1078885,1079016-1079120,
1079228-1079371
Length = 148
Score = 114 bits (274), Expect = 5e-26
Identities = 52/66 (78%), Positives = 57/66 (86%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G+ICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA + KTDR +Y AR W
Sbjct: 82 GNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDRLRYESTARGW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>01_06_0129 -
26770543-26770720,26774592-26774719,26774829-26774933,
26775661-26775788,26777332-26777433,26778760-26778861,
26779777-26779852,26779971-26780059,26780177-26780230,
26780482-26780614,26780671-26780797,26781590-26781648
Length = 426
Score = 113 bits (272), Expect = 8e-26
Identities = 51/62 (82%), Positives = 54/62 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY AR W
Sbjct: 306 GSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRHKYENTARTW 365
Query: 181 TR 186
T+
Sbjct: 366 TQ 367
>02_02_0339 +
9115297-9115366,9116280-9116407,9117537-9117641,
9118165-9118259,9119472-9119538,9119685-9119720
Length = 166
Score = 101 bits (241), Expect = 5e-22
Identities = 46/52 (88%), Positives = 48/52 (92%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREK 156
GSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR K
Sbjct: 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAK 133
>07_03_1012 +
23295976-23296264,23296475-23296548,23296972-23296996,
23297486-23297568,23297653-23297685,23298322-23298469,
23298625-23298722
Length = 249
Score = 83.4 bits (197), Expect = 1e-16
Identities = 36/65 (55%), Positives = 51/65 (78%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G++ +DILR WSPALTISKVLL+I +++ +P+P PLVP I +Y TDR K++E+A EW
Sbjct: 184 GNLSMDILREGWSPALTISKVLLAIKAIITNPDPYCPLVPSIGHLYLTDRTKHDEIAAEW 243
Query: 181 TRKYA 195
T ++A
Sbjct: 244 TMRFA 248
>01_05_0633 +
23840427-23840562,23840699-23840768,23840846-23840951,
23841086-23841184,23841320-23841442,23841555-23842691
Length = 556
Score = 72.9 bits (171), Expect = 1e-13
Identities = 37/69 (53%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Frame = +1
Query: 1 GSICLDIL----RAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNEL 168
G ICLDIL + W P+L I+ VL SI LL DPNPDD L+ EI+R YK +R+ ++
Sbjct: 92 GRICLDILNLPPKGAWQPSLNIATVLTSIGLLLSDPNPDDGLMAEISREYKYNRQVFDIN 151
Query: 169 AREWTRKYA 195
AR WT KYA
Sbjct: 152 ARSWTEKYA 160
>07_01_0481 -
3621798-3621926,3622572-3622660,3622780-3622933,
3624104-3624111,3625522-3625547,3625757-3625881
Length = 176
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P E AR++ ++ +YN RE
Sbjct: 109 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRKVRE 167
>05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960
Length = 127
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P E AR++ ++ +YN RE
Sbjct: 60 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRKVRE 118
>03_06_0260 -
32717142-32717270,32717743-32717831,32717950-32718039,
32721571-32721596,32721772-32721896
Length = 152
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P E AR++ ++ +YN RE
Sbjct: 85 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRKVRE 143
>01_07_0028 -
40588611-40588718,40588812-40588901,40589966-40590125,
40590547-40590595,40591158-40591338
Length = 195
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G+ICLDIL+ QWSPALT+ LLS+ +LL P PDDP +A+ Y D ++ AR W
Sbjct: 86 GAICLDILKDQWSPALTLKTALLSLQALLSAPAPDDPQDAVVAQQYLRDYSTFSATARYW 145
Query: 181 TRKYA 195
T +A
Sbjct: 146 TEAFA 150
>02_05_0555 - 29937973-29938395,29938509-29938790
Length = 234
Score = 64.5 bits (150), Expect = 5e-11
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G + LDI + WSPALTI+K+LL S+L DP D P IA+ YK + E Y E AR W
Sbjct: 104 GRMALDIFQDNWSPALTINKLLLCFVSVLFDPLLDRPTNRCIAKQYKHEYEAYEEKARAW 163
Query: 181 TRKYA 195
T+K++
Sbjct: 164 TQKHS 168
>04_04_0902 -
29262611-29262673,29262796-29262909,29262995-29263141,
29264922-29265005,29265151-29265225
Length = 160
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G++CL IL W P++T+ ++L+ I L DPNP+ +Y+ D E+Y + R+
Sbjct: 93 GAVCLSILSTAWKPSITVRQILIGIQELFDDPNPNSAAQNISYELYRKDMEEYRKRVRQQ 152
Query: 181 TRKY 192
+KY
Sbjct: 153 AKKY 156
>01_01_1187 + 9444742-9445317
Length = 191
Score = 50.8 bits (116), Expect = 6e-07
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRE 153
G+ICLDIL+ +WS A + +LLSI SLL +PN D PL + A ++ E
Sbjct: 128 GNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWPNQDE 178
>10_08_0755 -
20329127-20329189,20329276-20329389,20329465-20329617,
20331790-20332035
Length = 191
Score = 49.6 bits (113), Expect = 1e-06
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 1 GSICLDILRAQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAR 174
G++CL IL W PA+T+ ++L+ I LL PNP DP + I+ D+ +Y R
Sbjct: 122 GTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHIFIQDKPEYKRRVR 181
Query: 175 EWTRKY 192
++Y
Sbjct: 182 VQAKQY 187
>09_02_0429 +
9306862-9306970,9307834-9307942,9308538-9308616,
9308806-9308922,9309185-9309314,9311071-9311111
Length = 194
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKY 159
G++CL+ILR W P L I+ ++ + L PN +DPL + A + + D +K+
Sbjct: 109 GNVCLNILREDWKPVLNINTIVYGLNLLFIQPNDEDPLNHDAAAVLRDDPQKF 161
>08_02_0468 -
17505905-17506002,17506295-17506424,17506662-17506778,
17506881-17506959,17507546-17507654,17507857-17507969,
17510510-17510570,17511562-17511742,17512903-17512960,
17514292-17514497,17514582-17514671,17514752-17514813,
17514911-17514979,17515330-17515334,17516282-17516454
Length = 516
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKY 159
G++CL+ILR W P L ++ ++ + L PN +DPL E A + + + EK+
Sbjct: 412 GNVCLNILREDWKPVLNVNTIVYGLNLLFSQPNDEDPLNHEAAAVLRDNPEKF 464
>10_08_0197 +
15666873-15666916,15667098-15667177,15667490-15667604,
15667698-15667786,15667850-15667978,15670362-15670492
Length = 195
Score = 48.4 bits (110), Expect = 3e-06
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 13/78 (16%)
Frame = +1
Query: 1 GSICLDILRAQWSPA---LTISKVLLS----------ICSLLCDPNPDDPLVPEIARIYK 141
GS+CLD++ WSP +T+ V++S + LL PNP DPL E A +
Sbjct: 82 GSVCLDVINQTWSPMFGEITLVLVIISTDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMM 141
Query: 142 TDREKYNELAREWTRKYA 195
DR Y + +E+ KYA
Sbjct: 142 RDRPAYEQKVKEYCEKYA 159
>03_01_0159 +
1298002-1298070,1298181-1298264,1300354-1300506,
1300589-1300702,1300814-1300876
Length = 160
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 1 GSICLDILRAQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAR 174
G++CL IL W PA+T+ ++L+ I LL PNP DP + ++ D +Y R
Sbjct: 91 GTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHLFIQDPTEYKRRVR 150
Query: 175 EWTRKY 192
++Y
Sbjct: 151 LQAKQY 156
>10_02_0151 +
5895708-5895736,5896291-5896403,5897956-5898064,
5898580-5898658,5898747-5898863,5900001-5900138
Length = 194
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYK 141
G++CL+ILR W P L I+ V+ + L PN +DPL E A + +
Sbjct: 120 GNVCLNILREDWKPVLNINTVIYGLNLLFTQPNDEDPLNHEAAAVLR 166
>06_03_1005 +
26837047-26837093,26837644-26837731,26837854-26837998,
26838150-26838227,26838323-26838435,26838538-26838641,
26838804-26839119
Length = 296
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G IC++ L+ W+P+L + VLL + LL +P P+ L + ++ + E+Y AR +
Sbjct: 135 GEICVNTLKKDWNPSLGLRHVLLVVRCLLIEPFPESALNEQAGKLLLENYEEYARHARLY 194
Query: 181 TRKYAM 198
T +A+
Sbjct: 195 TSIHAL 200
>01_06_0222 -
27662122-27662159,27662251-27662341,27662760-27662801,
27663591-27663649,27664300-27664386,27664501-27664528,
27664683-27664718
Length = 126
Score = 44.8 bits (101), Expect = 4e-05
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 79 SLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 195
+LL PNPDDPL IA+ +K + + E A+EWTR YA
Sbjct: 85 ALLSAPNPDDPLSDNIAKHWKANEAEAVETAKEWTRLYA 123
>02_05_0558 - 29950120-29950319,29951213-29951579,29952067-29952372
Length = 290
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G++ LD WS A + +L+ S+L DP D P+ +IA Y D E+Y AR W
Sbjct: 112 GNMVLDA--ESWSCATKLRGLLIGFVSVLYDPLLDYPINYDIAEQYAYDYERYEAEARAW 169
Query: 181 TRKYA 195
TR+++
Sbjct: 170 TREFS 174
>12_02_1249 -
27331801-27331896,27331984-27332072,27334020-27334083,
27334208-27334336,27334554-27334607,27334712-27334741
Length = 153
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLL 87
G ICLDIL WSPA+T+S V +SI S+L
Sbjct: 88 GHICLDILYDSWSPAMTVSSVCISILSML 116
>05_05_0110 +
22470869-22470920,22471044-22471146,22473261-22473358,
22473430-22473530,22474052-22474129,22474578-22474655
Length = 169
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +1
Query: 16 DILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 189
++ +W+P T+ ++LSI S+L PN + P E A+ ++ R+ + + R RK
Sbjct: 107 ELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKRDDFKKKVRRIVRK 164
>01_06_1289 -
36010924-36011001,36011441-36011518,36012321-36012421,
36012506-36012603,36016213-36016315,36016435-36016486
Length = 169
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +1
Query: 16 DILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 189
++ +W+P T+ ++LSI S+L PN + P E A+ ++ R+ + + R RK
Sbjct: 107 ELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRDDFKKKVRRLVRK 164
>02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670
Length = 197
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1
Query: 64 LLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 189
LL S+L DP D P+ +IA Y+ + E Y + AREWTR+
Sbjct: 153 LLGFVSILYDPLLDYPINDDIAEQYENEYELYEKEAREWTRR 194
>03_06_0673 - 35446537-35446629,35447001-35448548
Length = 546
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 313 NPSFFGHCKNLKGYFRICLISVMAVIFKNANLLHLSKYKN 432
+P++ G C N++G +C + + VI A+ H ++N
Sbjct: 202 SPTYHGICSNIQGIVNVCHLQGIPVIVDEAHGAHFRFHRN 241
>07_03_1193 -
24702135-24702421,24702835-24703160,24703240-24703910,
24704342-24704421,24704515-24704572
Length = 473
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 23 CVHSGHQRSPYPKCCSQSAHFY 88
C +S H S YP CC + FY
Sbjct: 227 CTYSQHLASKYPSCCVSFSSFY 248
>03_03_0241 -
15757331-15757423,15757536-15757643,15758487-15758710,
15759543-15760110
Length = 330
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 121 EIARIYKTDREKYNELAREWTRK 189
++ + K REK NEL++ W+RK
Sbjct: 283 DVELLLKDTREKLNELSKHWSRK 305
>04_04_0864 - 28852252-28854582
Length = 776
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 13 LDILRAQWS-PALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNE 165
+D +A+W PAL + VLL C P P +V A + + Y+E
Sbjct: 1 MDFCKARWKVPALCLVTVLLQASLSACAPTPKTYIVQMAASEMPSSFDFYHE 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,233,045
Number of Sequences: 37544
Number of extensions: 303157
Number of successful extensions: 754
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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