Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313C01f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 140 7e-34
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 140 7e-34
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 75 2e-14
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 63 1e-10
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 58 3e-09
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 58 3e-09
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 58 5e-09
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 54 6e-08
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 49 2e-06
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 48 3e-06
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 48 3e-06
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 46 2e-05
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 44 5e-05
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 37 0.008
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 37 0.010
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 33 0.12
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 33 0.12
U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane p... 29 2.0
Z92829-13|CAB07344.2| 337|Caenorhabditis elegans Hypothetical p... 29 2.7
AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormo... 28 3.5
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 ho... 28 4.7
AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 ho... 28 4.7
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 27 6.2
L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient ... 27 6.2
L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient ... 27 6.2
AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologou... 27 6.2
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 27 6.2
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 27 8.1
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 140 bits (338), Expect = 7e-34
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDILR+QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRE+YN+LAREW
Sbjct: 82 GSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 140 bits (338), Expect = 7e-34
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDILR+QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRE+YN+LAREW
Sbjct: 82 GSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/65 (52%), Positives = 46/65 (70%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G ICLDIL+ +WSPAL I VLLSI +LL PNP+DPL ++A +KT+ + + A++W
Sbjct: 85 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPEDPLATDVAEQWKTNEAEAIKTAKQW 144
Query: 181 TRKYA 195
T YA
Sbjct: 145 TMNYA 149
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 62.9 bits (146), Expect = 1e-10
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G ICLDIL+ QW+ +LT+ VLLSI +L+C P P DP +A+ Y + A W
Sbjct: 89 GVICLDILKDQWAASLTLRTVLLSIQALMCTPEPKDPQDAVVAKQYMEKPAVFKATAEYW 148
Query: 181 TRKYA 195
T K+A
Sbjct: 149 TTKFA 153
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 58.4 bits (135), Expect = 3e-09
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
GSICLDIL+ +WSP ++ +L SI SLL +PNP+ P A++Y+ +R +Y + ++
Sbjct: 85 GSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQ 143
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 58.4 bits (135), Expect = 3e-09
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
GSICLDIL+ +WSP ++ +L SI SLL +PNP+ P A++Y+ +R +Y + ++
Sbjct: 85 GSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQ 143
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 57.6 bits (133), Expect = 5e-09
Identities = 25/65 (38%), Positives = 40/65 (61%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G+ICLDIL+ +W+ +LT+ VLLS+ ++LC P P DP +A+ + + + A W
Sbjct: 118 GTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYW 177
Query: 181 TRKYA 195
T +A
Sbjct: 178 TSYFA 182
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 54.0 bits (124), Expect = 6e-08
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +1
Query: 1 GSICLDILRAQ-WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
G CL I+ A+ W PA +V++++ SL+ +P P P+ ++A ++ D +K+ + A E
Sbjct: 83 GKFCLPIVTAENWKPATKTEQVMMALLSLINEPEPSHPIRADVAEEFQKDHKKFMKTAEE 142
Query: 178 WTRKYA 195
TRK+A
Sbjct: 143 HTRKHA 148
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/58 (32%), Positives = 36/58 (62%)
Frame = +1
Query: 16 DILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 189
++ +WSP +I K+LLS+ S+L +PN + P A++++ DR ++ ++A RK
Sbjct: 104 ELSNERWSPVQSIEKILLSVVSMLAEPNDESPANVSAAKMWREDRAQFEKIADSLVRK 161
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 GSICLDIL--RAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAR 174
G++CL +L W P+++I ++L+ I LL PN +DP E +IY +R +Y + +
Sbjct: 90 GTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVK 149
Query: 175 EWTRKYA 195
+ KYA
Sbjct: 150 KEAVKYA 156
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 GSICLDIL--RAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAR 174
G++CL +L W P+++I ++L+ I LL PN +DP E +IY +R +Y + +
Sbjct: 90 GTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVK 149
Query: 175 EWTRKYA 195
+ KYA
Sbjct: 150 KEAVKYA 156
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
G++CLD++ W+ ++ + + LL PN DPL E AR+Y E+Y RE
Sbjct: 85 GTVCLDVINQAWTALYDLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCRE 144
Query: 178 WTRKYA 195
+ ++A
Sbjct: 145 YVMRFA 150
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +1
Query: 1 GSICL-DILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
G+ICL D+ W ++TI KVL+ I S + + N +P+ EI +RE + + A
Sbjct: 431 GTICLHDVDNGVWPVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEKTAEF 490
Query: 178 WTRKYA 195
WT+++A
Sbjct: 491 WTKRFA 496
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLL 87
G ICL IL W+PAL++ V LSI S+L
Sbjct: 89 GHICLSILSDDWTPALSVQSVCLSILSML 117
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 31 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
+W P T+ +LLS+ S+L DPN + P + A K RE Y E ++
Sbjct: 108 RWLPVHTVETILLSVISMLTDPNFESPANVDAA---KMQRENYAEFKKK 153
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +1
Query: 19 ILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR----EKYNELAREW 180
+L+ W P T+ VLL++ LL +P+ P+ + A Y ++ +K ELA++W
Sbjct: 102 LLQENWKPETTMEDVLLNLIVLLNEPDLSRPVNIDAAHDYIHNKVEFVKKSTELAKKW 159
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 31 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRE 153
+W+P ++ +LLS+ SLL +PN P + + +Y+ +E
Sbjct: 114 RWNPTQSVRTILLSVISLLNEPNTSSPANVDASVMYRKWKE 154
>U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane
protease (impas)family protein 3 protein.
Length = 516
Score = 29.1 bits (62), Expect = 2.0
Identities = 8/32 (25%), Positives = 20/32 (62%)
Frame = -1
Query: 236 CVYVLLMSQLTHHMAYFLVHSRANSLYFSLSV 141
C++++L+ + HM+++ + + +Y SL V
Sbjct: 315 CIHIILLESFSQHMSFYFYYHEESMMYASLLV 346
>Z92829-13|CAB07344.2| 337|Caenorhabditis elegans Hypothetical
protein F10A3.6 protein.
Length = 337
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 46 LTISKVLLSICSLLCDPNP--DDPLVPEIARIYKTDREKYNELAREW 180
++IS + S+C + P+P D+ +PE + Y + E+YN L ++
Sbjct: 140 ISISFLWFSMCYFVNGPSPMKDENFLPEFQKNYCMEPEEYNYLGPQY 186
>AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 166 protein.
Length = 363
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 16 DILRAQWSPALTISKVLLSIC 78
D LR QW P ++ KVL+ C
Sbjct: 335 DALRKQWDPTMSFQKVLVESC 355
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 91 DPNPDDPLVPEIARIYKTDREKYNELARE 177
D + D + PE + +YK R+K+ E+A+E
Sbjct: 137 DVDTDKCINPEASVLYKEHRDKFREIAKE 165
>AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4
homolog protein 1, isoformb protein.
Length = 1420
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 22 LRAQWSPALTISKVLLSICSLLCDPNPD--DPLVPEIARIYKTDR 150
L +WS A+ +K + S LLC D + L+ E+ +Y D+
Sbjct: 606 LEMEWSSAVQCAKSVKSALELLCTTYCDIVESLIREVVEVYADDQ 650
>AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4
homolog protein 1, isoforma protein.
Length = 1418
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 22 LRAQWSPALTISKVLLSICSLLCDPNPD--DPLVPEIARIYKTDR 150
L +WS A+ +K + S LLC D + L+ E+ +Y D+
Sbjct: 606 LEMEWSSAVQCAKSVKSALELLCTTYCDIVESLIREVVEVYADDQ 650
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 49 TISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNE 165
TIS +C LL + +P+ PL I R++ +R K ++
Sbjct: 303 TISFPPSQVCDLLIEHDPEMPLTKVINRMFGEERPKLSD 341
>L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform b
protein.
Length = 1047
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 33 VVTSAHHIQSVALNLLTSMRSQPRRPFG 116
+V S+ HI +V +++ +M + RRP+G
Sbjct: 834 IVRSSSHIDAVKRDIMRTMSTTSRRPYG 861
>L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform a
protein.
Length = 1027
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 33 VVTSAHHIQSVALNLLTSMRSQPRRPFG 116
+V S+ HI +V +++ +M + RRP+G
Sbjct: 814 IVRSSSHIDAVKRDIMRTMSTTSRRPYG 841
>AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 1027
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 33 VVTSAHHIQSVALNLLTSMRSQPRRPFG 116
+V S+ HI +V +++ +M + RRP+G
Sbjct: 814 IVRSSSHIDAVKRDIMRTMSTTSRRPYG 841
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 49 TISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNE 165
TIS +C LL + +P+ PL I R++ +R K ++
Sbjct: 303 TISFPPSQVCDLLIEHDPEMPLTKVINRMFGEERPKLSD 341
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 34 WSPALTISKVLLSICSLLCDPNPDDPLV---PEIARIYKTDREKYNELAREW 180
W+P T+S +L+ + S + + +P + P+ R+Y +++N W
Sbjct: 112 WNPGWTVSAILIGLHSFMNENSPAAGSIAGTPQDQRMYAAASKEFNVKVYNW 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,509,139
Number of Sequences: 27780
Number of extensions: 268722
Number of successful extensions: 808
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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