Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313C01f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 122 1e-28
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 122 1e-28
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 122 2e-28
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 122 2e-28
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 122 2e-28
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 121 3e-28
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 121 3e-28
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 121 3e-28
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 121 3e-28
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 121 3e-28
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 121 3e-28
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 120 6e-28
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 111 2e-25
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 84 6e-17
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 80 8e-16
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 79 1e-15
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 79 1e-15
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 78 3e-15
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 72 2e-13
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 72 2e-13
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 72 3e-13
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 72 3e-13
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 72 3e-13
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 69 3e-12
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 64 5e-11
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 56 2e-08
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 55 3e-08
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 55 3e-08
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 52 3e-07
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 52 3e-07
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 51 4e-07
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 47 7e-06
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 46 2e-05
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 45 3e-05
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 42 3e-04
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 42 3e-04
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 41 6e-04
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 41 6e-04
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 41 6e-04
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 40 0.001
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 39 0.002
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 39 0.002
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 37 0.009
At3g56890.1 68416.m06328 F-box family protein-related predicted ... 30 0.82
At1g09790.1 68414.m01098 phytochelatin synthetase-related contai... 29 1.4
At3g49670.1 68416.m05429 leucine-rich repeat transmembrane prote... 29 1.9
At2g26670.1 68415.m03199 heme oxygenase 1 (HO1) (HY1) identical ... 29 2.5
At5g20320.1 68418.m02418 DEAD/DEAH box helicase, putative simila... 28 4.4
At2g06850.1 68415.m00767 xyloglucan:xyloglucosyl transferase / x... 28 4.4
At5g04970.1 68418.m00526 pectinesterase, putative contains simil... 27 5.8
At5g03905.1 68418.m00370 hesB-like domain-containing protein low... 27 5.8
At3g52270.1 68416.m05745 hypothetical protein 27 7.7
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 122 bits (295), Expect = 1e-28
Identities = 55/66 (83%), Positives = 58/66 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY AR W
Sbjct: 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 122 bits (294), Expect = 1e-28
Identities = 55/66 (83%), Positives = 58/66 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY AR W
Sbjct: 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 122 bits (293), Expect = 2e-28
Identities = 55/66 (83%), Positives = 58/66 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY AR W
Sbjct: 83 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNW 142
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 143 TQKYAM 148
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 122 bits (293), Expect = 2e-28
Identities = 55/66 (83%), Positives = 58/66 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY AR W
Sbjct: 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 122 bits (293), Expect = 2e-28
Identities = 55/66 (83%), Positives = 58/66 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY AR W
Sbjct: 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 121 bits (292), Expect = 3e-28
Identities = 54/66 (81%), Positives = 58/66 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTD+ KY AR W
Sbjct: 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 121 bits (292), Expect = 3e-28
Identities = 54/66 (81%), Positives = 58/66 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTD+ KY AR W
Sbjct: 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 121 bits (291), Expect = 3e-28
Identities = 54/66 (81%), Positives = 58/66 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLVPEIA IYKTDR KY A+ W
Sbjct: 82 GSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 121 bits (291), Expect = 3e-28
Identities = 54/66 (81%), Positives = 58/66 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLVPEIA IYKTDR KY A+ W
Sbjct: 82 GSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 121 bits (291), Expect = 3e-28
Identities = 54/66 (81%), Positives = 58/66 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTD+ KY AR W
Sbjct: 112 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTW 171
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 172 TQKYAM 177
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 121 bits (291), Expect = 3e-28
Identities = 54/66 (81%), Positives = 58/66 (87%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTD+ KY AR W
Sbjct: 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTW 141
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 142 TQKYAM 147
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 120 bits (289), Expect = 6e-28
Identities = 53/66 (80%), Positives = 59/66 (89%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G+ICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA IYKTD+ KY +AR W
Sbjct: 82 GNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSW 141
Query: 181 TRKYAM 198
T+KYA+
Sbjct: 142 TQKYAL 147
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 111 bits (268), Expect = 2e-25
Identities = 49/66 (74%), Positives = 56/66 (84%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSICLDIL+ QWSPA T SKVLLSICSLL DPNP+DPLVPEIA +YK D+ KY A++W
Sbjct: 83 GSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKW 142
Query: 181 TRKYAM 198
T+KYAM
Sbjct: 143 TQKYAM 148
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 83.8 bits (198), Expect = 6e-17
Identities = 36/65 (55%), Positives = 53/65 (81%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
GSIC++IL+ +W+PAL + KVLLSI LL PNPDDPLVPEI +++K +R ++++ ARE+
Sbjct: 88 GSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREF 147
Query: 181 TRKYA 195
T ++A
Sbjct: 148 TARHA 152
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 80.2 bits (189), Expect = 8e-16
Identities = 35/65 (53%), Positives = 49/65 (75%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G + ++ILR WSPALTI+KVL +I S+ P P P +P IAR+Y TDREK++E+A+EW
Sbjct: 117 GDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEW 176
Query: 181 TRKYA 195
T ++A
Sbjct: 177 TLRFA 181
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 79.4 bits (187), Expect = 1e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G ICLDIL+ +WSPAL I VLLSI +LL PNPDDPL IA+ +K++ + E A+EW
Sbjct: 86 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEW 145
Query: 181 TRKYA 195
TR YA
Sbjct: 146 TRLYA 150
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 79.4 bits (187), Expect = 1e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G ICLDIL+ +WSPAL I VLLSI +LL PNPDDPL IA+ +K++ + E A+EW
Sbjct: 53 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEW 112
Query: 181 TRKYA 195
TR YA
Sbjct: 113 TRLYA 117
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 78.2 bits (184), Expect = 3e-15
Identities = 37/65 (56%), Positives = 47/65 (72%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G ICLDIL+ +WSPAL I VLLSI +LL PNPDDPL IA+ +K++ + + A+EW
Sbjct: 86 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEW 145
Query: 181 TRKYA 195
TR YA
Sbjct: 146 TRLYA 150
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 72.1 bits (169), Expect = 2e-13
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P E AR+Y + +YN R+
Sbjct: 85 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRD 143
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 72.1 bits (169), Expect = 2e-13
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P E AR+Y + +YN R+
Sbjct: 85 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRD 143
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 71.7 bits (168), Expect = 3e-13
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYN 162
GSICLDIL+ QWSP ++ VL SI SLLCDPNPD P E AR++ ++ +YN
Sbjct: 85 GSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYN 138
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 71.7 bits (168), Expect = 3e-13
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV--PEIARIYKTDREKYNELAR 174
G I +DIL ++WS ALTI+ VLLSICS+L NP +PL+ AR+Y+ DR+ Y ++AR
Sbjct: 111 GEIFVDILGSRWSSALTINLVLLSICSIL--SNPVEPLLVSNHAARLYQKDRKAYEKVAR 168
Query: 175 EWTRKYA 195
EWT KYA
Sbjct: 169 EWTLKYA 175
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 71.7 bits (168), Expect = 3e-13
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P E AR++ + +YN RE
Sbjct: 85 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVRE 143
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Frame = +1
Query: 1 GSICLDIL----RAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNEL 168
G ICLDIL + W P+L IS VL S+ LL +PNPDD L+ E++R YK +R+ ++
Sbjct: 96 GRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYK 155
Query: 169 AREWTRKYA 195
ARE T KYA
Sbjct: 156 AREMTEKYA 164
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 64.1 bits (149), Expect = 5e-11
Identities = 30/65 (46%), Positives = 40/65 (61%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G+ICLDIL+ QWSPALT+ L+SI +LL P P DP +A Y + + + AR W
Sbjct: 85 GAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTARYW 144
Query: 181 TRKYA 195
T +A
Sbjct: 145 TETFA 149
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT-DREKYNELARE 177
G ICLDIL+ WSPA T+ V +I +L+ P PD PL + + ++ D +N +A+
Sbjct: 87 GEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQM 146
Query: 178 WTRKYAM 198
+TR AM
Sbjct: 147 YTRLAAM 153
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
GS+CLD++ WSP + V + LL PNP DPL E A + DR Y + +E
Sbjct: 82 GSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKE 141
Query: 178 WTRKYA 195
+ KYA
Sbjct: 142 YCEKYA 147
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
GS+CLD++ WSP + V + LL PNP DPL E A + DR Y + +E
Sbjct: 82 GSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKE 141
Query: 178 WTRKYA 195
+ KYA
Sbjct: 142 YCEKYA 147
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
G++CLD++ WSP + V S LL PNP DP E A + DR Y +E
Sbjct: 82 GAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKE 141
Query: 178 WTRKYA 195
+ KYA
Sbjct: 142 YCEKYA 147
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/59 (40%), Positives = 41/59 (69%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
G+ICLDIL+ +WS A + +LLSI SLL +PN PL + A+++ +++E+Y ++ +
Sbjct: 116 GNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLW-SNQEEYRKMVEK 173
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/59 (40%), Positives = 41/59 (69%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELARE 177
G+ICLDIL+ +WS A + +LLSI SLL +PN PL + A+++ +++E+Y ++ +
Sbjct: 117 GNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLW-SNQEEYRKMVEK 174
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 47.2 bits (107), Expect = 7e-06
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKY 159
G++CL+ILR W P L I+ V+ + L +PN +DPL E A + + + + +
Sbjct: 111 GNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTF 163
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 1 GSICLDILRAQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAR 174
G++CL IL W PA+T+ ++L+ I LL PNP DP + ++ D +Y + +
Sbjct: 91 GTVCLSILNEDYGWRPAITVKQILVGIQDLLDTPNPADPAQTDGYHLFCQDPVEYKKRVK 150
Query: 175 EWTRKY 192
+++Y
Sbjct: 151 LQSKQY 156
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLL 69
GSICLDIL+ QWSPALTISKV L
Sbjct: 82 GSICLDILKEQWSPALTISKVTL 104
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLL 87
G ICLDIL WSPA+T+S V +SI S+L
Sbjct: 96 GHICLDILYDSWSPAMTVSSVCISILSML 124
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 41.5 bits (93), Expect = 3e-04
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLL 87
G ICLDIL WSPA+T+S + +SI S+L
Sbjct: 96 GHICLDILYDSWSPAMTVSSICISILSML 124
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 40.7 bits (91), Expect = 6e-04
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +1
Query: 16 DILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 189
++ +W+P T+ ++LSI S+L PN + P E A+ ++ R+++ + RK
Sbjct: 136 ELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRK 193
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 40.7 bits (91), Expect = 6e-04
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +1
Query: 16 DILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 189
++ +W+P T+ ++LSI S+L PN + P E A+ ++ R+++ + RK
Sbjct: 104 ELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRK 161
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 40.7 bits (91), Expect = 6e-04
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLL 87
G ICLDIL WSPA+T++ V +SI S+L
Sbjct: 96 GHICLDILYDSWSPAMTVNSVCISILSML 124
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREW 180
G IC++ L+ W+P+L + VL + LL +P P+ L + ++ + ++Y AR +
Sbjct: 91 GEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLY 150
Query: 181 TRKYA 195
T +A
Sbjct: 151 TGIHA 155
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICSLL 87
G ICLD+L WSPA+ +S + LSI S+L
Sbjct: 96 GHICLDVLYDSWSPAMRLSSICLSILSML 124
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +1
Query: 16 DILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 189
++ +W+P T+ ++LSI S+L PN + P E A+ ++ +R ++ + R+
Sbjct: 105 ELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRR 162
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +1
Query: 1 GSICLDILRAQWSPALTISKVLLSICS 81
G ICLDIL+ +WSPAL I VLL S
Sbjct: 86 GRICLDILKDKWSPALQIRTVLLRYMS 112
>At3g56890.1 68416.m06328 F-box family protein-related predicted
proteins - Arabidopsis thaliana; contains TIGRFAM
TIGR01640: F-box protein interaction domain
Length = 219
Score = 30.3 bits (65), Expect = 0.82
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 149 LSVL*ILAISGTKGSSGLGSHRSEQIESNTLD 54
L VL I+A+ G KG + +GS + IES LD
Sbjct: 22 LMVLCIIAVKGLKGYASMGSEEFKFIESECLD 53
>At1g09790.1 68414.m01098 phytochelatin synthetase-related contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 454
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 23 CVHSGHQRSPYPKCCSQSAHFY 88
CV+S + SP PKCC + FY
Sbjct: 219 CVYSQFRSSPSPKCCVSLSAFY 240
>At3g49670.1 68416.m05429 leucine-rich repeat transmembrane protein
kinase, putative CLAVATA1 receptor kinase, Arabidopsis
thaliana, EMBL:ATU96879
Length = 1002
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 264 RIEPGLWRCVCVCFVDVTIDSSHGILPRPLTG 169
RI P + RC + FVD++ + G +P LTG
Sbjct: 519 RIAPEISRCKLLTFVDLSRNELSGDIPNELTG 550
>At2g26670.1 68415.m03199 heme oxygenase 1 (HO1) (HY1) identical to
plastid heme oxygenase (HY1) [Arabidopsis thaliana]
GI:4877362, heme oxygenase 1 [Arabidopsis thaliana]
GI:4530591 GB:AF132475; annotation updated per Seth J.
Davis at University of Wisconsin-Madison
Length = 282
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +1
Query: 121 EIARIYKTDREKYNELAREWTRK 189
E++++ + REK N++A EWTR+
Sbjct: 235 ELSQLLQNVREKLNKVAEEWTRE 257
>At5g20320.1 68418.m02418 DEAD/DEAH box helicase, putative similar
to CAF protein [Arabidopsis thaliana] GI:6102610;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain, PF03368:
Domain of unknown function, PF00636: RNase3 domain,
PF00035: Double-stranded RNA binding motif
Length = 1676
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 500 ERNIDLTENFLTNEDRNNV 444
E+ +DL ENF NEDR N+
Sbjct: 628 EKEMDLIENFKVNEDRMNL 646
>At2g06850.1 68415.m00767 xyloglucan:xyloglucosyl transferase /
xyloglucan endotransglycosylase / endo-xyloglucan
transferase (EXT) (EXGT-A1) identical to endo-xyloglucan
transferase (ext) GI:469484 and endoxyloglucan
transferase (EXGT-A1) GI:5533309 from [Arabidopsis
thaliana]
Length = 296
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -2
Query: 127 QFLAPKGRLGWDRIEVSRLRATLW---IW*ALVTTVHAECQDR 8
++ A +GR+ WD+ E L A W W + T++ C DR
Sbjct: 238 KYCATQGRMWWDQKEFRDLDAEQWRRLKWVRMKWTIYNYCTDR 280
>At5g04970.1 68418.m00526 pectinesterase, putative contains
similarity to pectinesterase from Vitis vinifera
GI:15081598, Prunus persica SP|Q43062; contains Pfam
profile PF01095 pectinesterase
Length = 624
Score = 27.5 bits (58), Expect = 5.8
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Frame = +1
Query: 232 THTSPQPGLYPPTLVPIPY*SLIHLNPNPSFFGHCKNLKGYFRICLISVMAVIFKNANLL 411
T QP +PPT P P S P+P Y ++C + AV ++
Sbjct: 53 TQPPTQPPSHPPTQPPTPPPSQSPSQPSPLPPNIACKSTPYPKLCRTILSAVKSSPSDPY 112
Query: 412 HLSKY--KNTHVQTLFLSSLVRKFSVR 486
H K+ K Q LS ++ +F+ R
Sbjct: 113 HYGKFTMKQCLKQARRLSKVINRFAQR 139
>At5g03905.1 68418.m00370 hesB-like domain-containing protein low
similarity to HesB [Cyanothece sp. PCC 8801] GI:2183309;
contains Pfam profile PF01521: HesB-like domain
Length = 158
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 134 ILAISGTKGSSGLGSHRSEQIESNTLDMVSAGDHCARRM 18
+L S S S Q ES++ D+V D+C RRM
Sbjct: 23 LLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIRRM 61
>At3g52270.1 68416.m05745 hypothetical protein
Length = 364
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +1
Query: 130 RIYKTDREKYNELAREWTRKYAM**VNCDI--NKTYTHTSPQPGLYPPTLVP 279
R + + E Y L RE T KY + N H P PG+ PT P
Sbjct: 229 RPHNENIESYGRLCRERTNKYMGKNRQIQVIDNARGMHMRPMPGMIIPTAAP 280
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,689,046
Number of Sequences: 28952
Number of extensions: 250777
Number of successful extensions: 726
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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