Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313B08f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC084578-1|AAH84578.1| 719|Homo sapiens AGRN protein protein. 37 0.037
AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein. 37 0.037
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein. 37 0.037
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein. 37 0.037
S44195-1|AAB23327.1| 62|Homo sapiens agrin protein. 34 0.26
AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding prot... 34 0.26
X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein. 33 0.80
D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator... 33 0.80
BC040029-1|AAH40029.1| 298|Homo sapiens SMARCA2 protein protein. 33 0.80
AL359076-5|CAI12969.1| 559|Homo sapiens SWI/SNF related, matrix... 33 0.80
AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix... 33 0.80
AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix... 33 0.80
AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix... 33 0.80
AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix... 33 0.80
Y07921-1|CAA69226.1| 480|Homo sapiens novel serine protease, PR... 32 1.1
D87258-1|BAA13322.1| 480|Homo sapiens serin protease with IGF-b... 32 1.1
BC011352-1|AAH11352.1| 445|Homo sapiens HTRA1 protein protein. 32 1.1
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 32 1.1
AF157623-1|AAD41525.1| 480|Homo sapiens HTRA serine protease pr... 32 1.1
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 32 1.4
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 32 1.4
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 32 1.4
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 32 1.4
AK095564-1|BAC04575.1| 175|Homo sapiens protein ( Homo sapiens ... 31 2.4
U34587-1|AAA91320.1| 411|Homo sapiens corticotropin-releasing f... 31 3.2
BC096830-1|AAH96830.1| 411|Homo sapiens corticotropin releasing... 31 3.2
BC047583-1|AAH47583.1| 446|Homo sapiens SMOC2 protein protein. 31 3.2
BC028420-1|AAH28420.1| 446|Homo sapiens SMOC2 protein protein. 31 3.2
AY449734-1|AAR18078.1| 411|Homo sapiens corticotropin-releasing... 31 3.2
AL731557-2|CAI14825.1| 334|Homo sapiens ventral anterior homeob... 31 3.2
AL442124-2|CAH73157.1| 457|Homo sapiens RP11-270C4__A.1 protein. 31 3.2
AL442124-1|CAH73156.1| 446|Homo sapiens RP11-270C4__A.1 protein. 31 3.2
AL391319-3|CAI39895.1| 457|Homo sapiens RP11-270C4__A.1 protein. 31 3.2
AL391319-2|CAI39896.1| 446|Homo sapiens RP11-270C4__A.1 protein. 31 3.2
AL138918-2|CAI20434.1| 457|Homo sapiens RP11-270C4__A.1 protein. 31 3.2
AL138918-1|CAI20435.1| 446|Homo sapiens RP11-270C4__A.1 protein. 31 3.2
AL109940-2|CAI20529.1| 457|Homo sapiens RP11-270C4__A.1 protein. 31 3.2
AL109940-1|CAI20528.1| 446|Homo sapiens RP11-270C4__A.1 protein. 31 3.2
AK222691-1|BAD96411.1| 374|Homo sapiens transmembrane protein w... 31 3.2
AK160365-1|BAD18708.1| 1651|Homo sapiens FLJ00261 protein protein. 31 3.2
AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein. 31 3.2
AF019381-1|AAB94562.1| 397|Homo sapiens corticotropin releasing... 31 3.2
AF011406-1|AAB94503.1| 438|Homo sapiens corticotropin releasing... 31 3.2
AC004976-3|AAC71653.1| 411|Homo sapiens corticotropin-releasing... 31 3.2
AC004976-2|AAC71654.1| 397|Homo sapiens WUGSC:H_DJ1143H19.2a pr... 31 3.2
AB065699-1|BAC05922.1| 411|Homo sapiens seven transmembrane hel... 31 3.2
AB014737-1|BAB20274.1| 457|Homo sapiens SMAP-2b protein. 31 3.2
AB014730-1|BAB20267.1| 446|Homo sapiens SMAP-2 protein. 31 3.2
BC032025-1|AAH32025.1| 141|Homo sapiens chromosome 3 open readi... 30 4.3
BC011548-1|AAH11548.1| 435|Homo sapiens SPARC related modular c... 30 4.3
BC008608-1|AAH08608.1| 434|Homo sapiens SPARC related modular c... 30 4.3
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 30 4.3
AJ249900-1|CAC10352.1| 434|Homo sapiens secreted modular calciu... 30 4.3
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 30 4.3
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 30 4.3
AL162426-8|CAI41183.1| 520|Homo sapiens chromosome 9 open readi... 30 5.7
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 29 7.5
BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associat... 29 7.5
BC018398-1|AAH18398.1| 483|Homo sapiens Unknown (protein for IM... 29 7.5
BC002907-1|AAH02907.1| 188|Homo sapiens transmembrane protein 1... 29 7.5
AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein. 29 7.5
AK000519-1|BAA91225.1| 188|Homo sapiens protein ( Homo sapiens ... 29 7.5
AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA s... 29 7.5
Y13622-1|CAA73944.1| 1587|Homo sapiens latent TGF-beta binding p... 29 9.9
U68485-1|AAC17461.1| 454|Homo sapiens bridging integrator prote... 29 9.9
U60477-1|AAB09475.1| 414|Homo sapiens apoliprotein AI regulator... 29 9.9
U35139-1|AAB39469.1| 321|Homo sapiens NECDIN related protein pr... 29 9.9
M64497-1|AAA86429.1| 414|Homo sapiens apolipoprotein AI regulat... 29 9.9
M62760-1|AAA21479.1| 351|Homo sapiens ovalbumin upstream promot... 29 9.9
BT006865-1|AAP35511.1| 439|Homo sapiens bridging integrator 1 p... 29 9.9
BC042897-1|AAH42897.1| 414|Homo sapiens nuclear receptor subfam... 29 9.9
BC031558-1|AAH31558.1| 297|Homo sapiens chromosome 1 open readi... 29 9.9
BC014664-1|AAH14664.1| 414|Homo sapiens nuclear receptor subfam... 29 9.9
BC008750-1|AAH08750.1| 321|Homo sapiens necdin homolog (mouse) ... 29 9.9
BC004101-1|AAH04101.1| 439|Homo sapiens bridging integrator 1 p... 29 9.9
AL358817-5|CAI13858.1| 1223|Homo sapiens ADAM metallopeptidase w... 29 9.9
AL358817-4|CAI13857.1| 1226|Homo sapiens ADAM metallopeptidase w... 29 9.9
AL355344-5|CAI41277.1| 1223|Homo sapiens ADAM metallopeptidase w... 29 9.9
AL355344-4|CAI41278.1| 1226|Homo sapiens ADAM metallopeptidase w... 29 9.9
AL137199-1|CAB69909.1| 282|Homo sapiens hypothetical protein pr... 29 9.9
AL137198-1|CAB69908.1| 297|Homo sapiens hypothetical protein pr... 29 9.9
AL049557-6|CAI22713.1| 297|Homo sapiens novel protein protein. 29 9.9
AK126615-1|BAC86613.1| 169|Homo sapiens protein ( Homo sapiens ... 29 9.9
AJ345098-1|CAC87943.1| 1223|Homo sapiens metalloprotease-disinte... 29 9.9
AF366351-1|AAL79814.1| 1159|Homo sapiens ADAMTS14 protein. 29 9.9
AF358666-1|AAL40229.1| 1223|Homo sapiens a disintegrin-like and ... 29 9.9
AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein. 29 9.9
AF051345-1|AAC39880.2| 1624|Homo sapiens latent transforming gro... 29 9.9
AF051344-1|AAC39879.2| 1557|Homo sapiens latent transforming gro... 29 9.9
AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein. 29 9.9
AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein. 29 9.9
AB046843-1|BAB13449.2| 1236|Homo sapiens KIAA1623 protein protein. 29 9.9
AB007828-1|BAA22660.1| 321|Homo sapiens necdin protein. 29 9.9
>BC084578-1|AAH84578.1| 719|Homo sapiens AGRN protein protein.
Length = 719
Score = 37.1 bits (82), Expect = 0.037
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 325 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
RC PP GPVC D T+ + CEL +C + T G C
Sbjct: 104 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 146
Score = 34.7 bits (76), Expect = 0.20
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 307 PPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
P +C C + P PVC D T++T CEL+ C V + G C
Sbjct: 184 PCVCDFSCQSVPGSPVCGSDGV----TYSTECELKKARCESQRGLYVAAQGAC 232
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 328 CVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
C A VC D T+ C+L+ ++CR+ ++ SLG C
Sbjct: 410 CPEANATKVCGSDGV----TYGNECQLKTIACRQGLQISIQSLGPC 451
>AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 37.1 bits (82), Expect = 0.037
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 325 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
RC PP GPVC D T+ + CEL +C + T G C
Sbjct: 622 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 664
Score = 34.7 bits (76), Expect = 0.20
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 307 PPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
P +C C + P PVC D T++T CEL+ C V + G C
Sbjct: 702 PCVCDFSCQSVPGSPVCGSDGV----TYSTECELKKARCESQRGLYVAAQGAC 750
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 328 CVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
C A VC D T+ C+L+ ++CR+ ++ SLG C
Sbjct: 928 CPEANATKVCGSDGV----TYGNECQLKTIACRQGLQISIQSLGPC 969
>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
Length = 2026
Score = 37.1 bits (82), Expect = 0.037
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 325 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
RC PP GPVC D T+ + CEL +C + T G C
Sbjct: 603 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 645
Score = 34.7 bits (76), Expect = 0.20
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 307 PPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
P +C C + P PVC D T++T CEL+ C V + G C
Sbjct: 683 PCVCDFSCQSVPGSPVCGSDGV----TYSTECELKKARCESQRGLYVAAQGAC 731
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 328 CVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
C A VC D T+ C+L+ ++CR+ ++ SLG C
Sbjct: 909 CPEANATKVCGSDGV----TYGNECQLKTIACRQGLQISIQSLGPC 950
>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 37.1 bits (82), Expect = 0.037
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 325 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
RC PP GPVC D T+ + CEL +C + T G C
Sbjct: 622 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 664
Score = 34.7 bits (76), Expect = 0.20
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 307 PPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
P +C C + P PVC D T++T CEL+ C V + G C
Sbjct: 702 PCVCDFSCQSVPGSPVCGSDGV----TYSTECELKKARCESQRGLYVAAQGAC 750
Score = 30.7 bits (66), Expect = 3.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 328 CVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
C A VC D T+ C+L+ ++CR+ ++ SLG C
Sbjct: 928 CPEANATKVCGSDGV----TYGNECQLKTIACRQGLQISIQSLGPC 969
>S44195-1|AAB23327.1| 62|Homo sapiens agrin protein.
Length = 62
Score = 34.3 bits (75), Expect = 0.26
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 325 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCREST 435
RC PP GPVC D T+ + CEL +C + T
Sbjct: 23 RCEHPPHGPVCGSDGV----TYGSACELREAACLQQT 55
>AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding protein
1 protein.
Length = 632
Score = 34.3 bits (75), Expect = 0.26
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 211 IPTRLGSVKEV-SAPDMRAPGELVRARVREGVPPPLCAGRCVAPPAGPV 354
+P R S K S P+ AP E + R R +PPP +G +PPA P+
Sbjct: 475 VPPRPASPKVTRSPPETAAPVEDMARRTRPTMPPPQVSGSRSSPPAPPL 523
>X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein.
Length = 1586
Score = 32.7 bits (71), Expect = 0.80
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 356 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 222
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator
hSNF2a protein.
Length = 1572
Score = 32.7 bits (71), Expect = 0.80
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 356 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 222
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>BC040029-1|AAH40029.1| 298|Homo sapiens SMARCA2 protein protein.
Length = 298
Score = 32.7 bits (71), Expect = 0.80
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 356 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 222
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL359076-5|CAI12969.1| 559|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 559
Score = 32.7 bits (71), Expect = 0.80
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 356 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 222
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 32.7 bits (71), Expect = 0.80
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 356 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 222
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 32.7 bits (71), Expect = 0.80
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 356 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 222
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 32.7 bits (71), Expect = 0.80
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 356 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 222
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 32.7 bits (71), Expect = 0.80
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 356 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 222
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>Y07921-1|CAA69226.1| 480|Homo sapiens novel serine protease,
PRSS11 protein.
Length = 480
Score = 32.3 bits (70), Expect = 1.1
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 319 AGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 426
AG CV + PVC D A T+A LC+L A S R
Sbjct: 107 AGLCVCASSEPVCGSD----ANTYANLCQLRAASRR 138
>D87258-1|BAA13322.1| 480|Homo sapiens serin protease with
IGF-binding motif protein.
Length = 480
Score = 32.3 bits (70), Expect = 1.1
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 319 AGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 426
AG CV + PVC D A T+A LC+L A S R
Sbjct: 107 AGLCVCASSEPVCGSD----ANTYANLCQLRAASRR 138
>BC011352-1|AAH11352.1| 445|Homo sapiens HTRA1 protein protein.
Length = 445
Score = 32.3 bits (70), Expect = 1.1
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 319 AGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 426
AG CV + PVC D A T+A LC+L A S R
Sbjct: 72 AGLCVCASSEPVCGSD----ANTYANLCQLRAASRR 103
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 32.3 bits (70), Expect = 1.1
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Frame = -1
Query: 368 ASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGA--------LISGALTSLTLPNLVG 213
+S +H+ P AT A S S + T SPGA SGA TS T+P L
Sbjct: 3412 SSFSHSSP--DATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVPTLTH 3469
Query: 212 MNGRLAQSAFIHTVTKTIQTKTFP 141
G +A + T +T +KTFP
Sbjct: 3470 SPGMPETTALLSTHPRTETSKTFP 3493
>AF157623-1|AAD41525.1| 480|Homo sapiens HTRA serine protease
protein.
Length = 480
Score = 32.3 bits (70), Expect = 1.1
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 319 AGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 426
AG CV + PVC D A T+A LC+L A S R
Sbjct: 107 AGLCVCASSEPVCGSD----ANTYANLCQLRAASRR 138
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 413 ASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLART-SSPGALISG 249
A+++ VA V+ VPA G AGG + GTPS +RT +P +SG
Sbjct: 20 ATAAGVVAVVVPVPAGEPQKGGGAGGGGGAASGPAAGTPSAPGSRTPGNPATAVSG 75
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 413 ASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLART-SSPGALISG 249
A+++ VA V+ VPA G AGG + GTPS +RT +P +SG
Sbjct: 20 ATAAGVVAVVVPVPAGEPQKGGGAGGGGGAASGPAAGTPSAPGSRTPGNPATAVSG 75
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 31.9 bits (69), Expect = 1.4
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Frame = -1
Query: 368 ASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGA--------LISGALTSLTLPNLVG 213
+S +H+ P AT A S S + T SPGA SGA TS T+P L
Sbjct: 11708 SSFSHSSP--DATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVPTLTH 11765
Query: 212 MNGRLAQSAFIHTVTKTIQTKTFP 141
G +A + T +T +KTFP
Sbjct: 11766 SPGMPETTALLSTHPRTGTSKTFP 11789
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 413 ASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLART-SSPGALISG 249
A+++ VA V+ VPA G AGG + GTPS +RT +P +SG
Sbjct: 20 ATAAGVVAVVVPVPAGEPQKGGGAGGGGGAASGPAAGTPSAPGSRTPGNPATAVSG 75
>AK095564-1|BAC04575.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ38245 fis, clone FCBBF2007186. ).
Length = 175
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 396 SSECPRRSGCIKGAHWSCRRGHAPP 322
S CP R+G ++ WS R G APP
Sbjct: 27 SCPCPGRAGSLRTPTWSMRLGQAPP 51
>U34587-1|AAA91320.1| 411|Homo sapiens corticotropin-releasing
factor receptor 2 protein.
Length = 411
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 290 SARGCHRRCVQGGAWPRR--QDQCAPLMQPERRGHSLLY 400
+ R +R C++ G W + QC P++ ++R + L Y
Sbjct: 75 TTRNAYRECLENGTWASKINYSQCEPILDDKQRKYDLHY 113
>BC096830-1|AAH96830.1| 411|Homo sapiens corticotropin releasing
hormone receptor 2 protein.
Length = 411
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 290 SARGCHRRCVQGGAWPRR--QDQCAPLMQPERRGHSLLY 400
+ R +R C++ G W + QC P++ ++R + L Y
Sbjct: 75 TTRNAYRECLENGTWASKINYSQCEPILDDKQRKYDLHY 113
>BC047583-1|AAH47583.1| 446|Homo sapiens SMOC2 protein protein.
Length = 446
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 316 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 429
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>BC028420-1|AAH28420.1| 446|Homo sapiens SMOC2 protein protein.
Length = 446
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 316 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 429
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AY449734-1|AAR18078.1| 411|Homo sapiens corticotropin-releasing
hormone receptor 2 protein.
Length = 411
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 290 SARGCHRRCVQGGAWPRR--QDQCAPLMQPERRGHSLLY 400
+ R +R C++ G W + QC P++ ++R + L Y
Sbjct: 75 TTRNAYRECLENGTWASKINYSQCEPILDDKQRKYDLHY 113
>AL731557-2|CAI14825.1| 334|Homo sapiens ventral anterior homeobox
1 protein.
Length = 334
Score = 30.7 bits (66), Expect = 3.2
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -1
Query: 371 AASKAHTGPAGGAT-HRPAHSGGGTPSRTLARTSSPGALISG-ALTSLTLPNLVG 213
AA+ A GPAG A+ H PA G P GA +G +L SL +P+L+G
Sbjct: 228 AAAAAAPGPAGAASPHPPAVGGAPGPGPAGPGGLHAGAPAAGHSLFSLPVPSLLG 282
>AL442124-2|CAH73157.1| 457|Homo sapiens RP11-270C4__A.1 protein.
Length = 457
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 316 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 429
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL442124-1|CAH73156.1| 446|Homo sapiens RP11-270C4__A.1 protein.
Length = 446
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 316 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 429
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL391319-3|CAI39895.1| 457|Homo sapiens RP11-270C4__A.1 protein.
Length = 457
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 316 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 429
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL391319-2|CAI39896.1| 446|Homo sapiens RP11-270C4__A.1 protein.
Length = 446
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 316 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 429
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL138918-2|CAI20434.1| 457|Homo sapiens RP11-270C4__A.1 protein.
Length = 457
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 316 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 429
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL138918-1|CAI20435.1| 446|Homo sapiens RP11-270C4__A.1 protein.
Length = 446
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 316 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 429
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL109940-2|CAI20529.1| 457|Homo sapiens RP11-270C4__A.1 protein.
Length = 457
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 316 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 429
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL109940-1|CAI20528.1| 446|Homo sapiens RP11-270C4__A.1 protein.
Length = 446
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 316 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 429
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AK222691-1|BAD96411.1| 374|Homo sapiens transmembrane protein with
EGF-like and two follistatin-like domains 2 variant
protein.
Length = 374
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 313 LCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
+C C P+CA D +++ C+++ SC++ VTSLG C
Sbjct: 181 VCNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVTSLGRC 227
>AK160365-1|BAD18708.1| 1651|Homo sapiens FLJ00261 protein protein.
Length = 1651
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 361 RRTLVLPAGPRTALHTAAVAPPRGPSLGPAHPGLSYPV 248
R+ V G +A+V PPR P P P +YP+
Sbjct: 545 RKGTVSSQGTEVVFASASVTPPRTPDSAPPSPAEAYPI 582
>AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein.
Length = 1004
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -2
Query: 343 PAGPRTALHTAAVAPPRGPSLGPAHPGLSYPVR*LL*RSP 224
PA PR+ A P P LGP PG P R RSP
Sbjct: 454 PAAPRSIKVEAVEEPEAAPILGPGEPGPQAPSRTPSPRSP 493
>AF019381-1|AAB94562.1| 397|Homo sapiens corticotropin releasing
hormone receptor type 2 gamma isoform protein.
Length = 397
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 290 SARGCHRRCVQGGAWPRR--QDQCAPLMQPERRGHSLLY 400
+ R +R C++ G W + QC P++ ++R + L Y
Sbjct: 61 TTRNAYRECLENGTWASKINYSQCEPILDDKQRKYDLHY 99
>AF011406-1|AAB94503.1| 438|Homo sapiens corticotropin releasing
hormone receptor type 2 beta isoform protein.
Length = 438
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 290 SARGCHRRCVQGGAWPRR--QDQCAPLMQPERRGHSLLY 400
+ R +R C++ G W + QC P++ ++R + L Y
Sbjct: 102 TTRNAYRECLENGTWASKINYSQCEPILDDKQRKYDLHY 140
>AC004976-3|AAC71653.1| 411|Homo sapiens corticotropin-releasing
factor receptor protein.
Length = 411
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 290 SARGCHRRCVQGGAWPRR--QDQCAPLMQPERRGHSLLY 400
+ R +R C++ G W + QC P++ ++R + L Y
Sbjct: 75 TTRNAYRECLENGTWASKINYSQCEPILDDKQRKYDLHY 113
>AC004976-2|AAC71654.1| 397|Homo sapiens WUGSC:H_DJ1143H19.2a
protein.
Length = 397
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 290 SARGCHRRCVQGGAWPRR--QDQCAPLMQPERRGHSLLY 400
+ R +R C++ G W + QC P++ ++R + L Y
Sbjct: 61 TTRNAYRECLENGTWASKINYSQCEPILDDKQRKYDLHY 99
>AB065699-1|BAC05922.1| 411|Homo sapiens seven transmembrane helix
receptor protein.
Length = 411
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 290 SARGCHRRCVQGGAWPRR--QDQCAPLMQPERRGHSLLY 400
+ R +R C++ G W + QC P++ ++R + L Y
Sbjct: 75 TTRNAYRECLENGTWASKINYSQCEPILDDKQRKYDLHY 113
>AB014737-1|BAB20274.1| 457|Homo sapiens SMAP-2b protein.
Length = 457
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 316 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 429
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AB014730-1|BAB20267.1| 446|Homo sapiens SMAP-2 protein.
Length = 446
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 316 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 429
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>BC032025-1|AAH32025.1| 141|Homo sapiens chromosome 3 open reading
frame 22 protein.
Length = 141
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 211 IPTRLGSVKEVSAPDMRAPGELVRARVREGVPPPLC 318
+PTR V+ + APD +P A + PPPLC
Sbjct: 63 VPTRSIPVRGLGAPDFTSPSGSCPAPLPAPSPPPLC 98
>BC011548-1|AAH11548.1| 435|Homo sapiens SPARC related modular
calcium binding 1 protein.
Length = 435
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 310 PLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
P C C P+CA D R++ ++CE + CR+ T V G C
Sbjct: 41 PQCNLHCSRTQPKPICASDG----RSYESMCEYQRAKCRDPT-LGVVHRGRC 87
>BC008608-1|AAH08608.1| 434|Homo sapiens SPARC related modular
calcium binding 1 protein.
Length = 434
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 310 PLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
P C C P+CA D R++ ++CE + CR+ T V G C
Sbjct: 41 PQCNLHCSRTQPKPICASDG----RSYESMCEYQRAKCRDPT-LGVVHRGRC 87
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 391 RMSSPFRLHQRRTLVLPAGPRTALHTAAVAPPRGPSL 281
RM P + RT+V+ PR L V PP GP L
Sbjct: 996 RMLQPVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPEL 1032
>AJ249900-1|CAC10352.1| 434|Homo sapiens secreted modular
calcium-binding protein protein.
Length = 434
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 310 PLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 465
P C C P+CA D R++ ++CE + CR+ T V G C
Sbjct: 41 PQCNLHCSRTQPKPICASDG----RSYESMCEYQRAKCRDPT-LGVVHRGRC 87
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 391 RMSSPFRLHQRRTLVLPAGPRTALHTAAVAPPRGPSL 281
RM P + RT+V+ PR L V PP GP L
Sbjct: 799 RMLQPVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPEL 835
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 391 RMSSPFRLHQRRTLVLPAGPRTALHTAAVAPPRGPSL 281
RM P + RT+V+ PR L V PP GP L
Sbjct: 977 RMLQPVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPEL 1013
>AL162426-8|CAI41183.1| 520|Homo sapiens chromosome 9 open reading
frame 117 protein.
Length = 520
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 190 DCASLPFIPTRLGSVKEVSAPDMRAPGELVR 282
D L +I TR+G+ + S+P+MRAPG L R
Sbjct: 477 DLRLLSYI-TRVGTFRAHSSPEMRAPGSLKR 506
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = -1
Query: 392 ANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPNLVG 213
A+ AVP S+ T P +T A +GG S + PG S T LP G
Sbjct: 321 ASTTAVPTLSEGLTSPRYTSTLGTATTGGPRQSAGSTEPTVPGVATSTLPTRSALPGTTG 380
Query: 212 MNG 204
G
Sbjct: 381 SLG 383
>BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associated
factor 1 protein.
Length = 1312
Score = 29.5 bits (63), Expect = 7.5
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +3
Query: 228 ERQRSQRTGYESPG*AGPSEGPRGGATAAVCRAVRGPAGRTS 353
E Q+ T S A PS P G+TA A GPA R S
Sbjct: 1038 EEQQPATTTATSTAAAAPSTAPSAGSTAGDSGAEDGPASRVS 1079
>BC018398-1|AAH18398.1| 483|Homo sapiens Unknown (protein for
IMAGE:3881197) protein.
Length = 483
Score = 29.5 bits (63), Expect = 7.5
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +3
Query: 228 ERQRSQRTGYESPG*AGPSEGPRGGATAAVCRAVRGPAGRTS 353
E Q+ T S A PS P G+TA A GPA R S
Sbjct: 209 EEQQPATTTATSTAAAAPSTAPSAGSTAGDSGAEDGPASRVS 250
>BC002907-1|AAH02907.1| 188|Homo sapiens transmembrane protein 160
protein.
Length = 188
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 373 RLHQRRTLVLPAGPRTALHTAAVAPPRGPSLGPAHPGLS 257
RL RR+L+ P PR+ + AP GP G + P +S
Sbjct: 15 RLRFRRSLLPPQRPRSGGARGSFAPGHGPRAGASPPPVS 53
>AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein.
Length = 1343
Score = 29.5 bits (63), Expect = 7.5
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +3
Query: 228 ERQRSQRTGYESPG*AGPSEGPRGGATAAVCRAVRGPAGRTS 353
E Q+ T S A PS P G+TA A GPA R S
Sbjct: 1069 EEQQPATTTATSTAAAAPSTAPSAGSTAGDSGAEDGPASRVS 1110
>AK000519-1|BAA91225.1| 188|Homo sapiens protein ( Homo sapiens
cDNA FLJ20512 fis, clone KAT09739. ).
Length = 188
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 373 RLHQRRTLVLPAGPRTALHTAAVAPPRGPSLGPAHPGLS 257
RL RR+L+ P PR+ + AP GP G + P +S
Sbjct: 15 RLRFRRSLLPPQRPRSGGARGSFAPGHGPRAGASPPPVS 53
>AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA
splicing factor SR-A1 protein.
Length = 1312
Score = 29.5 bits (63), Expect = 7.5
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +3
Query: 228 ERQRSQRTGYESPG*AGPSEGPRGGATAAVCRAVRGPAGRTS 353
E Q+ T S A PS P G+TA A GPA R S
Sbjct: 1038 EEQQPATTTATSTAAAAPSTAPSAGSTAGDSGAEDGPASRVS 1079
>Y13622-1|CAA73944.1| 1587|Homo sapiens latent TGF-beta binding
protein-4 protein.
Length = 1587
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 307 PPLCA-GRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 426
P +C GRC++ P+G CA D+ T C ++ CR
Sbjct: 516 PQVCGPGRCISRPSGYTCACDSGFRLSPQGTRC-IDVDECR 555
>U68485-1|AAC17461.1| 454|Homo sapiens bridging integrator
protein-1 protein.
Length = 454
Score = 29.1 bits (62), Expect = 9.9
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -1
Query: 374 PAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPNLVGMN-GRL 198
P S A T P H P +GG TP TL ++ S A S + T P G
Sbjct: 284 PDGSPAAT-PEIRVNHEPEPAGGATPGATLPKSPSQPAEAS-EVAGGTQPAAGAQEPGET 341
Query: 197 AQSAFIHTVTKTIQTKTFPLNISN*VQ 117
A S + + +TFP ++ V+
Sbjct: 342 AASEAASSSLPAVVVETFPATVNGTVE 368
>U60477-1|AAB09475.1| 414|Homo sapiens apoliprotein AI regulatory
protein-1 protein.
Length = 414
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 350 GPAGGATHRPAHSGGGTPSRTLARTSSPG 264
GP GA H P G G P+ T A+T++ G
Sbjct: 31 GPPPGAPHTPQTPGQGGPASTPAQTAAGG 59
>U35139-1|AAB39469.1| 321|Homo sapiens NECDIN related protein
protein.
Length = 321
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 235 KEVSAPDM--RAPGELVRAR--VREGVPPPLCAGRCVAPPAGPVCAFDAA 372
K++S P+ AP V + V EGVPP +PP GP A AA
Sbjct: 6 KDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAA 55
>M64497-1|AAA86429.1| 414|Homo sapiens apolipoprotein AI regulatory
protein-1 protein.
Length = 414
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 350 GPAGGATHRPAHSGGGTPSRTLARTSSPG 264
GP GA H P G G P+ T A+T++ G
Sbjct: 31 GPPPGAPHTPQTPGQGGPASTPAQTAAGG 59
>M62760-1|AAA21479.1| 351|Homo sapiens ovalbumin upstream promoter
transcription factor II protein.
Length = 351
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 350 GPAGGATHRPAHSGGGTPSRTLARTSSPG 264
GP GA H P G G P+ T A+T++ G
Sbjct: 31 GPPPGAPHTPQTPGQGGPASTPAQTAAGG 59
>BT006865-1|AAP35511.1| 439|Homo sapiens bridging integrator 1
protein.
Length = 439
Score = 29.1 bits (62), Expect = 9.9
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -1
Query: 374 PAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPNLVGMN-GRL 198
P S A T P H P +GG TP TL ++ S A S + T P G
Sbjct: 269 PDGSPAAT-PEIRVNHEPEPAGGATPGATLPKSPSQPAEAS-EVAGGTQPAAGAQEPGET 326
Query: 197 AQSAFIHTVTKTIQTKTFPLNISN*VQ 117
A S + + +TFP ++ V+
Sbjct: 327 AASEAASSSLPAVVVETFPATVNGTVE 353
>BC042897-1|AAH42897.1| 414|Homo sapiens nuclear receptor subfamily
2, group F, member 2 protein.
Length = 414
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 350 GPAGGATHRPAHSGGGTPSRTLARTSSPG 264
GP GA H P G G P+ T A+T++ G
Sbjct: 31 GPPPGAPHTPQTPGQGGPASTPAQTAAGG 59
>BC031558-1|AAH31558.1| 297|Homo sapiens chromosome 1 open reading
frame 183 protein.
Length = 297
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 269 VSWSERGSARGCHRRCVQGGAWPRRQDQCAPLMQP 373
V S G C C +GG P R C+P QP
Sbjct: 63 VPGSPEGPRTQCEHPCWEGGRGPARPTVCSPSSQP 97
>BC014664-1|AAH14664.1| 414|Homo sapiens nuclear receptor subfamily
2, group F, member 2 protein.
Length = 414
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 350 GPAGGATHRPAHSGGGTPSRTLARTSSPG 264
GP GA H P G G P+ T A+T++ G
Sbjct: 31 GPPPGAPHTPQTPGQGGPASTPAQTAAGG 59
>BC008750-1|AAH08750.1| 321|Homo sapiens necdin homolog (mouse)
protein.
Length = 321
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 235 KEVSAPDM--RAPGELVRAR--VREGVPPPLCAGRCVAPPAGPVCAFDAA 372
K++S P+ AP V + V EGVPP +PP GP A AA
Sbjct: 6 KDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAA 55
>BC004101-1|AAH04101.1| 439|Homo sapiens bridging integrator 1
protein.
Length = 439
Score = 29.1 bits (62), Expect = 9.9
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -1
Query: 374 PAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPNLVGMN-GRL 198
P S A T P H P +GG TP TL ++ S A S + T P G
Sbjct: 269 PDGSPAAT-PEIRVNHEPEPAGGATPGATLPKSPSQPAEAS-EVAGGTQPAAGAQEPGET 326
Query: 197 AQSAFIHTVTKTIQTKTFPLNISN*VQ 117
A S + + +TFP ++ V+
Sbjct: 327 AASEAASSSLPAVVVETFPATVNGTVE 353
>AL358817-5|CAI13858.1| 1223|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 14 protein.
Length = 1223
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 434 VLSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTP 297
VL R+ + HR+ V + AS + GP G T P S G+P
Sbjct: 1075 VLDRYCSIPGYHRLCCVSCIKKASGPNPGPDPGPTSLPPFSTPGSP 1120
>AL358817-4|CAI13857.1| 1226|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 14 protein.
Length = 1226
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 434 VLSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTP 297
VL R+ + HR+ V + AS + GP G T P S G+P
Sbjct: 1078 VLDRYCSIPGYHRLCCVSCIKKASGPNPGPDPGPTSLPPFSTPGSP 1123
>AL355344-5|CAI41277.1| 1223|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 14 protein.
Length = 1223
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 434 VLSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTP 297
VL R+ + HR+ V + AS + GP G T P S G+P
Sbjct: 1075 VLDRYCSIPGYHRLCCVSCIKKASGPNPGPDPGPTSLPPFSTPGSP 1120
>AL355344-4|CAI41278.1| 1226|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 14 protein.
Length = 1226
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 434 VLSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTP 297
VL R+ + HR+ V + AS + GP G T P S G+P
Sbjct: 1078 VLDRYCSIPGYHRLCCVSCIKKASGPNPGPDPGPTSLPPFSTPGSP 1123
>AL137199-1|CAB69909.1| 282|Homo sapiens hypothetical protein
protein.
Length = 282
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 269 VSWSERGSARGCHRRCVQGGAWPRRQDQCAPLMQP 373
V S G C C +GG P R C+P QP
Sbjct: 48 VPGSPEGPRTQCEHPCWEGGRGPARPTVCSPSSQP 82
>AL137198-1|CAB69908.1| 297|Homo sapiens hypothetical protein
protein.
Length = 297
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 269 VSWSERGSARGCHRRCVQGGAWPRRQDQCAPLMQP 373
V S G C C +GG P R C+P QP
Sbjct: 63 VPGSPEGPRTQCEHPCWEGGRGPARPTVCSPSSQP 97
>AL049557-6|CAI22713.1| 297|Homo sapiens novel protein protein.
Length = 297
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 269 VSWSERGSARGCHRRCVQGGAWPRRQDQCAPLMQP 373
V S G C C +GG P R C+P QP
Sbjct: 63 VPGSPEGPRTQCEHPCWEGGRGPARPTVCSPSSQP 97
>AK126615-1|BAC86613.1| 169|Homo sapiens protein ( Homo sapiens
cDNA FLJ44653 fis, clone BRACE2046976. ).
Length = 169
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 395 VANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSP 267
+A+ L P + A P G A HRPAH+ +PS L P
Sbjct: 111 LAHSLGAPVGAGAAGCPCGPAIHRPAHA--ASPSTCLPTPPQP 151
>AJ345098-1|CAC87943.1| 1223|Homo sapiens metalloprotease-disintegrin
protease protein.
Length = 1223
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 434 VLSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTP 297
VL R+ + HR+ V + AS + GP G T P S G+P
Sbjct: 1075 VLDRYCSIPGYHRLCCVSCIKKASGPNPGPDPGPTSLPPFSTPGSP 1120
>AF366351-1|AAL79814.1| 1159|Homo sapiens ADAMTS14 protein.
Length = 1159
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 434 VLSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTP 297
VL R+ + HR+ V + AS + GP G T P S G+P
Sbjct: 1011 VLDRYCSIPGYHRLCCVSCIKKASGPNPGPDPGPTSLPPFSTPGSP 1056
>AF358666-1|AAL40229.1| 1223|Homo sapiens a disintegrin-like and
metalloprotease with thrombospondin type 1 motif 14 prec
protein.
Length = 1223
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 434 VLSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTP 297
VL R+ + HR+ V + AS + GP G T P S G+P
Sbjct: 1075 VLDRYCSIPGYHRLCCVSCIKKASGPNPGPDPGPTSLPPFSTPGSP 1120
>AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 301 VPPPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRES 432
VPPP +G VAPP+ +G A T A A S S
Sbjct: 394 VPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATAS 437
>AF051345-1|AAC39880.2| 1624|Homo sapiens latent transforming growth
factor-beta binding protein 4L protein.
Length = 1624
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 307 PPLCA-GRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 426
P +C GRC++ P+G CA D+ T C ++ CR
Sbjct: 553 PQVCGPGRCISRPSGYTCACDSGFRLSPQGTRC-IDVDECR 592
>AF051344-1|AAC39879.2| 1557|Homo sapiens latent transforming growth
factor-beta binding protein 4S protein.
Length = 1557
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 307 PPLCA-GRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 426
P +C GRC++ P+G CA D+ T C ++ CR
Sbjct: 486 PQVCGPGRCISRPSGYTCACDSGFRLSPQGTRC-IDVDECR 525
>AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 301 VPPPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRES 432
VPPP +G VAPP+ +G A T A A S S
Sbjct: 394 VPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATAS 437
>AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein.
Length = 579
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 301 VPPPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRES 432
VPPP +G VAPP+ +G A T A A S S
Sbjct: 357 VPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATAS 400
>AB046843-1|BAB13449.2| 1236|Homo sapiens KIAA1623 protein protein.
Length = 1236
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 236 KKSAHRI*EPRVSWSERGSARGCHRRCVQGGAWPRRQDQCAPLMQPERRG 385
++ A R EP+ G + G RRC+ GG +++ A L++ R G
Sbjct: 523 RRPAPRRLEPQADEGGGGGSGGGGRRCLSGGCGAPEEEEEAALVERRRAG 572
>AB007828-1|BAA22660.1| 321|Homo sapiens necdin protein.
Length = 321
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 235 KEVSAPDM--RAPGELVRAR--VREGVPPPLCAGRCVAPPAGPVCAFDAA 372
K++S P+ AP V + V EGVPP +PP GP A AA
Sbjct: 6 KDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAA 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,218,484
Number of Sequences: 237096
Number of extensions: 2054430
Number of successful extensions: 9453
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 8134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9385
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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