Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313B08f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g49710.1 68414.m05573 fucosyltransferase-like protein, putati... 32 0.20
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 31 0.62
At5g64090.1 68418.m08049 expressed protein 29 1.9
At3g15780.1 68416.m01998 expressed protein 29 1.9
At2g30200.1 68415.m03672 expressed protein 29 1.9
At5g15680.1 68418.m01834 expressed protein 29 2.5
At3g10300.3 68416.m01236 calcium-binding EF hand family protein ... 29 2.5
At3g10300.2 68416.m01235 calcium-binding EF hand family protein ... 29 2.5
At3g10300.1 68416.m01234 calcium-binding EF hand family protein ... 29 2.5
At1g10390.1 68414.m01171 nucleoporin family protein contains Pfa... 28 3.3
At5g54920.1 68418.m06840 expressed protein 28 4.4
At1g26810.1 68414.m03267 galactosyltransferase family protein co... 28 4.4
At5g66850.1 68418.m08428 protein kinase family protein contains ... 27 5.8
At2g24530.1 68415.m02930 expressed protein ; expression supporte... 27 5.8
At5g33898.1 68418.m04020 hypothetical protein 27 7.7
At2g41830.1 68415.m05169 cyclin-related contains Pfam profile PF... 27 7.7
At1g06870.1 68414.m00731 signal peptidase, putative similar to c... 27 7.7
At1g04380.1 68414.m00428 2-oxoglutarate-dependent dioxygenase, p... 27 7.7
>At1g49710.1 68414.m05573 fucosyltransferase-like protein, putative
/ FucT2, putative / FucTB, putative (FUT12) identical to
Putative fucosyltransferase-like protein (FucTB) (FucT2)
(AtFUT12) (Swiss-Prot:Q9FX97) [Arabidopsis thaliana];
similar to glycoprotein 3-alpha-L-fucosyltransferase A
(SP:Q9LJK1) [Arabidopsis thaliana]; contains Pfam
profile PF00852: Fucosyl transferase
Length = 513
Score = 32.3 bits (70), Expect = 0.20
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -1
Query: 350 GPAGGATHRPAHSGGGTPSRTLARTSSPGALISGAL---TSLTLPNLVGMNGRLAQSAFI 180
GP GATH + G+PS + + +SS +S L +L + +G GRL + A +
Sbjct: 9 GPRAGATHDEFPATNGSPSSSSSPSSSIKRKLSNLLPLCVALVVIAEIGFLGRLDKVALV 68
Query: 179 HTVT 168
T+T
Sbjct: 69 DTLT 72
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 30.7 bits (66), Expect = 0.62
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -1
Query: 431 LSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSS 270
+S S SH ++ A P+ S P +H P+HS TPS + A T S
Sbjct: 188 ISHTPALSPSHATSHSPATPSPSPKSPSPV---SHSPSHSPAHTPSHSPAHTPS 238
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 374 PAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLT 231
P+ S AH P+ H P+HS +PS + A SP S A + T
Sbjct: 245 PSHSPAHA-PSHSPAHAPSHSPAHSPSHSPATPKSPSPSSSPAQSPAT 291
>At5g64090.1 68418.m08049 expressed protein
Length = 448
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -1
Query: 428 SRHETASSSHRVANVLAVPAASKAHTG--PAGGATHRPAHSGGGTPSRTLARTSSPGALI 255
S ++S+ HR +V A + A +G P+ A P HS + S+ +R S +L+
Sbjct: 15 SSSTSSSTPHRFKSVTTPTATAAAVSGFSPSAAADRDPMHSWWESVSKQRSRILSLSSLL 74
Query: 254 SG 249
SG
Sbjct: 75 SG 76
>At3g15780.1 68416.m01998 expressed protein
Length = 117
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 385 SSPFRLHQRRTLVLPAGPRTALHTAAVAPPRGPSLGPAHP 266
S P+ LH+R T++L + R A PP P P P
Sbjct: 24 SPPYHLHRRNTVLLASPRRLRRLAVAGGPPSPPGPDPPPP 63
>At2g30200.1 68415.m03672 expressed protein
Length = 393
Score = 29.1 bits (62), Expect = 1.9
Identities = 24/87 (27%), Positives = 40/87 (45%)
Frame = -1
Query: 302 TPSRTLARTSSPGALISGALTSLTLPNLVGMNGRLAQSAFIHTVTKTIQTKTFPLNISN* 123
+PS +L R +S A+ + A +SL LP++ N +++A K + +++S
Sbjct: 13 SPSHSLIRRTSLSAMATTASSSLLLPSISLNNLSSSKNASFGFAAKNLSRSRISMSVSAG 72
Query: 122 VQIQTPPHSVRDSLNTKYERCSFI*LP 42
Q T V DSL Y+ S P
Sbjct: 73 SQSTT----VHDSLFADYKPTSAFLFP 95
>At5g15680.1 68418.m01834 expressed protein
Length = 2151
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 186 SRLRQSTVHSNEIGERQRSQRTGYESPG*AG 278
S + + ++N++GE QRS+ GYE P +G
Sbjct: 1810 SSMPRDEFNTNDLGEFQRSESRGYEMPPSSG 1840
>At3g10300.3 68416.m01236 calcium-binding EF hand family protein low
similarity to SP|P12815 Programmed cell death protein 6
(Probable calcium-binding protein ALG-2) {Mus musculus};
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 335
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 356 HTGPAGGATHRPAHSGG-GTPSRTLARTSSPGALISGALTSLTLPNLV 216
H G GGA + H GG G P + S +L+ A T PN+V
Sbjct: 123 HGGGYGGAPQQSGHGGGYGAPPPQASYGSPFASLVPSAFPPGTDPNIV 170
>At3g10300.2 68416.m01235 calcium-binding EF hand family protein low
similarity to SP|P12815 Programmed cell death protein 6
(Probable calcium-binding protein ALG-2) {Mus musculus};
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 324
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 356 HTGPAGGATHRPAHSGG-GTPSRTLARTSSPGALISGALTSLTLPNLV 216
H G GGA + H GG G P + S +L+ A T PN+V
Sbjct: 123 HGGGYGGAPQQSGHGGGYGAPPPQASYGSPFASLVPSAFPPGTDPNIV 170
>At3g10300.1 68416.m01234 calcium-binding EF hand family protein low
similarity to SP|P12815 Programmed cell death protein 6
(Probable calcium-binding protein ALG-2) {Mus musculus};
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 232
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 356 HTGPAGGATHRPAHSGG-GTPSRTLARTSSPGALISGALTSLTLPNLV 216
H G GGA + H GG G P + S +L+ A T PN+V
Sbjct: 123 HGGGYGGAPQQSGHGGGYGAPPPQASYGSPFASLVPSAFPPGTDPNIV 170
>At1g10390.1 68414.m01171 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 1041
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 380 AVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSS 270
+ PA + T PA GA+ PA G TPS + TSS
Sbjct: 256 STPAFGASST-PAFGASSTPAFGGSSTPSFGASNTSS 291
>At5g54920.1 68418.m06840 expressed protein
Length = 517
Score = 27.9 bits (59), Expect = 4.4
Identities = 23/82 (28%), Positives = 34/82 (41%)
Frame = -1
Query: 404 SHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLP 225
SH + VP + A TG AGG +H P H G T +R + L P
Sbjct: 351 SHASSPSKFVPYTNLA-TGNAGGGSHFPQHMVGPTINRGQPHRFTTQYHSVQPTPMLVNP 409
Query: 224 NLVGMNGRLAQSAFIHTVTKTI 159
N M GR Q ++ +++ +
Sbjct: 410 NPQVMVGRSGQLMYMQPISQDL 431
>At1g26810.1 68414.m03267 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 643
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 430 FRDTKQPRVHIE*RMSSPFRLHQRRTLVLPAGPRTALHTAAVAPPRGPSLGPAHP 266
FRDT +P + E R++ FRL LP + H + + P+L P P
Sbjct: 338 FRDTLEPWLVSEIRITGDFRLISILASGLPTSEESE-HVVDLEALKSPTLSPLRP 391
>At5g66850.1 68418.m08428 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain; identical
to cDNA MAP3K gamma protein kinase GI:2315152
Length = 716
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 343 PAGPRTALHTA-AVAPPRGPSLGPAHPGLSYPV 248
P+ P + LH+ + APPR P HP LS V
Sbjct: 267 PSRPSSPLHSVDSSAPPRDSVSSPLHPRLSTDV 299
>At2g24530.1 68415.m02930 expressed protein ; expression supported
by MPSS
Length = 252
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 205 PFIPTRLGSVKEVSAPDMRAP-GELVRARVREGVPPPLCAGRCVAPPAGPVCAFDAAGTA 381
P R+ + ++++A MR + +ARV + P +AP P C+ G+
Sbjct: 40 PVEKPRIPNKEKIAAVSMRDDQNQEEQARVNLSMSP------LIAPLGIPFCSASVGGSP 93
Query: 382 RTFATLCELEAVSCRES 432
RT E +SC +S
Sbjct: 94 RTIPVSTNAELISCYDS 110
>At5g33898.1 68418.m04020 hypothetical protein
Length = 248
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 236 KKSAHRI*EPRVSWSERGSARGCHRRCVQGGA 331
KK A+ + VS ++ +ARG HR C + G+
Sbjct: 32 KKEAYDFIDKAVSRPQKANARGLHRSCRKEGS 63
>At2g41830.1 68415.m05169 cyclin-related contains Pfam profile
PF02984: Cyclin, C-terminal domain
Length = 1025
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -1
Query: 422 HETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSS 270
H+T +HR+ +V+ VP + P +T G G P R+L+RT+S
Sbjct: 504 HKTRIGAHRIFSVVLVPTS----VCPRPSSTTTDLKKGMGLP-RSLSRTAS 549
>At1g06870.1 68414.m00731 signal peptidase, putative similar to
chloroplast thylakoidal processing peptidase GB:CAA71502
GI:2769566 from [Arabidopsis thaliana]; contains Pfam
profile PF00461: Signal peptidase I
Length = 367
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = -1
Query: 350 GPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTL---PNLVGMNG 204
GP+ G RPA S T +R + L+ G ++ + L P GM G
Sbjct: 62 GPSSGPRARPASSMYSTIAREILEEGCKSPLVLGMISLMNLTGAPQFSGMTG 113
>At1g04380.1 68414.m00428 2-oxoglutarate-dependent dioxygenase,
putative Strong similarity to Arabidopsis 2A6
(gb|X83096), tomato ethylene synthesis regulatory
protein E8 (SP|P10967)
Length = 345
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 396 SSECPRRSGCIKGAHWSCRRGHAPPCTQ 313
+S+ + GC+KG H C + PPC Q
Sbjct: 183 NSDTLKSMGCMKGLHMICH--YYPPCPQ 208
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,181,391
Number of Sequences: 28952
Number of extensions: 271572
Number of successful extensions: 891
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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