Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313B06f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    29   0.095
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           26   0.67 
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    25   1.2  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    25   1.2  
AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding pr...    23   8.2  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 29.1 bits (62), Expect = 0.095
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 394 FTLPILTVTFSHCQIKQDVLSQIYRTHR 477
           F L ++ +   HCQ  QD+  Q  R HR
Sbjct: 22  FNLKVMQINVDHCQAGQDLALQAAREHR 49


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 26.2 bits (55), Expect = 0.67
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2

Query: 499 SSNYKGSSDEYDRFEREH 446
           SS + GSS  YDR  REH
Sbjct: 49  SSGHSGSSSLYDRVPREH 66


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 445 DVLSQIYRTHRCCL 486
           DV S++Y THR CL
Sbjct: 242 DVCSEVYNTHRDCL 255


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 445 DVLSQIYRTHRCCL 486
           DV S++Y THR CL
Sbjct: 242 DVCSEVYNTHRDCL 255


>AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding
           protein OBPjj7a protein.
          Length = 235

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -3

Query: 276 VQDPCCKKSYRTCLHCVSPEDEGQS*KPLQKQEIQAFRFKSQEDPCY 136
           VQD  CK+ Y+ C    +  +  +    ++KQ     R K++ D  Y
Sbjct: 52  VQDDKCKRKYKCCND--ANTENMEKIHEIKKQCFMEVRNKNKADGAY 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,701
Number of Sequences: 2352
Number of extensions: 6624
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)