BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313B05f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0615 - 12152941-12153726 40 0.001
08_01_0797 + 7711772-7712869 38 0.004
04_04_1221 + 31845938-31847038 38 0.005
07_01_0484 - 3643294-3643478,3644282-3644555,3644646-3645018,364... 38 0.006
08_01_0794 - 7687480-7687798,7687817-7688523 37 0.011
08_01_0203 + 1639993-1641141 36 0.015
08_02_1305 - 26013022-26014107 36 0.020
08_01_0801 - 7750548-7751708 36 0.020
08_01_0799 + 7734031-7735102,7735453-7735475 36 0.026
02_02_0612 - 12142192-12143253 36 0.026
10_08_0064 + 14592534-14592880,14593327-14593576 35 0.034
06_03_1064 - 27300735-27301829 35 0.034
08_02_1310 - 26037025-26038074 35 0.046
08_02_1308 - 26024491-26025405 34 0.060
08_02_0623 - 19429029-19430207 34 0.060
02_02_0618 - 12190727-12191698 34 0.060
10_08_0054 + 14501357-14502478 34 0.080
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 34 0.080
04_04_1219 + 31835854-31836105,31836481-31837152 34 0.080
11_06_0463 + 23879587-23879771,23879783-23881658 33 0.11
10_08_0051 + 14489255-14490403 33 0.11
06_01_1008 - 7853089-7854147 33 0.11
11_06_0466 + 23903000-23904041,23905282-23905672,23905708-23906188 33 0.14
08_02_1309 - 26029691-26030609,26030850-26030925,26032198-26032579 33 0.14
11_06_0464 + 23894893-23895077,23895148-23895706 33 0.18
10_08_0052 - 14491990-14493108 33 0.18
09_02_0527 + 10234622-10235773 33 0.18
08_02_0286 - 15326876-15328135 33 0.18
08_02_1301 - 25977012-25978037 32 0.24
08_02_0624 - 19434168-19435352 32 0.24
03_06_0266 + 32746379-32746836,32747898-32748273,32748367-327486... 32 0.24
08_01_0811 - 7872886-7873261,7873446-7873861,7874253-7874262,787... 32 0.32
10_08_0056 + 14511651-14512775 31 0.42
08_01_0197 + 1623454-1624566 31 0.42
08_01_0027 - 195321-195932,197206-197415 31 0.42
04_03_0991 - 21500143-21500799,21500834-21501172 31 0.42
10_08_0124 + 14992399-14993478 31 0.56
07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644 31 0.56
04_03_0990 - 21481459-21481933,21482140-21482771 31 0.56
10_08_0119 - 14952786-14953931,14954709-14954831 31 0.74
10_08_0053 - 14496494-14497240,14497418-14497501,14497676-14498152 31 0.74
08_01_0657 + 5674907-5674993,5675615-5676583 31 0.74
08_01_0200 + 1632883-1633913,1634620-1634677 31 0.74
08_02_1303 - 26006294-26006513,26006576-26007318 30 0.98
08_02_1121 + 24457413-24457528,24458395-24458552,24458927-244590... 30 0.98
08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546 30 0.98
08_01_0802 - 7754561-7755628 30 0.98
04_04_1220 + 31843628-31844755 30 0.98
02_02_0620 + 12210812-12210997,12212397-12212474,12212744-122128... 30 0.98
10_08_0125 - 15000650-15001717 30 1.3
10_08_0118 + 14948636-14949667,14949893-14949953,14951226-14951977 30 1.3
10_08_0087 + 14730936-14732027 30 1.3
10_08_0063 + 14588177-14589343 30 1.3
08_02_1304 - 26008105-26009070 30 1.3
08_02_1251 - 25592537-25593380,25593589-25593893 30 1.3
05_04_0228 - 19224901-19224991,19225095-19225219,19225293-192254... 30 1.3
03_05_0727 - 27170082-27170336,27170398-27170793,27171009-27171014 30 1.3
08_02_1302 - 25990378-25991457 29 1.7
10_08_0055 - 14505747-14506934 29 2.3
09_04_0623 - 19038777-19040561 29 2.3
05_06_0113 + 25708994-25709114,25709276-25709733 29 2.3
10_08_0088 + 14734585-14734762,14735876-14736729 29 3.0
10_08_0079 + 14704086-14705195 29 3.0
09_02_0123 + 4537231-4537366,4538088-4538171,4538432-4538586,453... 29 3.0
09_02_0037 + 3251066-3251086,3251143-3251151,3251249-3251436,325... 29 3.0
02_04_0471 + 23192001-23192102,23192229-23192356,23192440-231931... 29 3.0
02_02_0613 - 12145489-12145590,12145698-12145761,12146180-12146721 29 3.0
09_02_0528 + 10253372-10254556 28 4.0
10_08_0078 + 14699588-14700645,14700739-14700874,14701076-14701096 28 5.2
10_08_0077 + 14690894-14691030,14691258-14691936 28 5.2
10_08_0068 + 14624376-14624975,14625113-14625601 28 5.2
04_03_0994 - 21514495-21515610 28 5.2
11_06_0465 + 23900454-23901530 27 6.9
10_08_0131 - 15078894-15079617,15079898-15080016 27 6.9
09_06_0192 - 21450158-21450276,21451084-21451573,21451750-214518... 27 6.9
04_04_0031 - 22289078-22289521,22289702-22289754,22289839-222900... 27 6.9
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 27 9.1
11_02_0105 - 8336309-8336392,8336514-8336579,8337279-8337431,833... 27 9.1
10_08_0058 + 14521922-14522779 27 9.1
02_04_0564 + 23905196-23905413,23905631-23905766,23906005-239060... 27 9.1
>02_02_0615 - 12152941-12153726
Length = 261
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
LLKN++ AD T E+F HK +LAA S VF+AMF
Sbjct: 179 LLKNMDGADVTF-DVGQERFSAHKCVLAARSSVFEAMF 215
>08_01_0797 + 7711772-7712869
Length = 365
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLV-SEDGEKFRVHKAILAAHSDVFKAMFREETI 521
F LL+ ED +V S +GE F HK +LAA S VFKA F E I
Sbjct: 180 FGKLLEEEEDVGRDVVFSVEGESFAAHKLVLAARSPVFKAEFYGEMI 226
>04_04_1221 + 31845938-31847038
Length = 366
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 375 VHT-FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
+HT FE +L++ E +D T + G++FR HK +LA S VFKA
Sbjct: 180 LHTDFENMLQDGEGSDVTF-TVGGQEFRAHKCVLAFRSPVFKA 221
>07_01_0484 -
3643294-3643478,3644282-3644555,3644646-3645018,
3645177-3645233,3646034-3646458
Length = 437
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMFREE 515
F LL N E D L S GE+F HK +LAA S VF++ F ++
Sbjct: 215 FGTLLDNHEGVDVVL-SVGGERFHAHKLVLAARSTVFRSKFFDD 257
>08_01_0794 - 7687480-7687798,7687817-7688523
Length = 341
Score = 36.7 bits (81), Expect = 0.011
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = +3
Query: 375 VHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
+ F LL+ E AD T V GEK HK +LAA S VFKA
Sbjct: 177 LENFGELLEKGEGADVTFVV-GGEKIAAHKIVLAARSSVFKA 217
>08_01_0203 + 1639993-1641141
Length = 382
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3
Query: 390 GLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
GLL + AD TLV GE+F H+A+LA S VFKA
Sbjct: 184 GLLGDKGTADVTLVVR-GEEFAAHRAVLAMRSPVFKA 219
>08_02_1305 - 26013022-26014107
Length = 361
Score = 35.9 bits (79), Expect = 0.020
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 390 GLLKNLEDAD--FTLVSEDGEKFRVHKAILAAHSDVFK 497
GLL + + AD F +V GE+F H+A+LAA S VF+
Sbjct: 175 GLLDSEDGADVTFVVVGGGGERFAAHRAVLAARSPVFR 212
>08_01_0801 - 7750548-7751708
Length = 386
Score = 35.9 bits (79), Expect = 0.020
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
F LL++ E AD T GE F VHK +LA S VFKA
Sbjct: 191 FANLLQSKEGADVTF-DVAGEPFSVHKLVLAMRSPVFKA 228
>08_01_0799 + 7734031-7735102,7735453-7735475
Length = 364
Score = 35.5 bits (78), Expect = 0.026
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
F LL+ E +D T V GEK HK ILAA S VFKA
Sbjct: 181 FGELLEKGEGSDVTFVV-GGEKIAAHKIILAARSSVFKA 218
>02_02_0612 - 12142192-12143253
Length = 353
Score = 35.5 bits (78), Expect = 0.026
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 378 HTFEGLLKNLEDADFTL-VSEDGEKFRVHKAILAAHSDVFKAMF 506
H + LLKN++ D T V +D F HK ILAA S VF+A F
Sbjct: 174 HLGDLLLKNMDSTDVTFNVGQD--IFSAHKCILAARSSVFRAEF 215
>10_08_0064 + 14592534-14592880,14593327-14593576
Length = 198
Score = 35.1 bits (77), Expect = 0.034
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 387 EGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
E LL++ E AD T GE F H+ +LAA S VF+A
Sbjct: 28 EALLQSEEGADVTF-EVGGESFAAHRCVLAARSSVFRA 64
>06_03_1064 - 27300735-27301829
Length = 364
Score = 35.1 bits (77), Expect = 0.034
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 375 VHTFEG-LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
+H + G LL++ AD T V GE F HKAILA+ S VF A
Sbjct: 171 LHAYLGALLESKTGADVTFVVS-GESFAAHKAILASRSPVFMA 212
>08_02_1310 - 26037025-26038074
Length = 349
Score = 34.7 bits (76), Expect = 0.046
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 408 EDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
+ AD LV GE FR H+A+LAA S VFKA
Sbjct: 177 DTADVALVV-GGETFRAHRAVLAARSPVFKA 206
>08_02_1308 - 26024491-26025405
Length = 304
Score = 34.3 bits (75), Expect = 0.060
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 390 GLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
GLL E D + + DGE F H+A+LAA S VF+A
Sbjct: 120 GLLDRGEGTDVSFLV-DGETFPAHRAVLAARSPVFRA 155
>08_02_0623 - 19429029-19430207
Length = 392
Score = 34.3 bits (75), Expect = 0.060
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 387 EGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
E LL++ + +D T V K+ VH+A+LAA S VF+A F
Sbjct: 180 EQLLESKKGSDLT-VQVGESKYDVHRAVLAARSPVFRAQF 218
>02_02_0618 - 12190727-12191698
Length = 323
Score = 34.3 bits (75), Expect = 0.060
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 444 EKFRVHKAILAAHSDVFKAMF 506
E+FR HK ILAA S VF+A+F
Sbjct: 197 ERFRAHKCILAARSSVFRALF 217
>10_08_0054 + 14501357-14502478
Length = 373
Score = 33.9 bits (74), Expect = 0.080
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +3
Query: 390 GLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
GLL+++E AD T GE+ H+++LAA S VF+A
Sbjct: 190 GLLESMEGADVTF-HVAGEEVPAHRSVLAARSPVFRA 225
>07_03_1529 +
27491963-27492465,27493045-27493154,27493384-27493510,
27494082-27494430,27494975-27495251,27496236-27496333,
27498090-27498214,27498270-27498326,27498328-27498370,
27498581-27498667,27498802-27498882,27499735-27499901,
27499987-27500098,27500188-27500390,27500473-27500607,
27501106-27501205
Length = 857
Score = 33.9 bits (74), Expect = 0.080
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +3
Query: 333 PKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
PKI + V ++ H + LL + + D T DGE F HK +LAA S VF+A
Sbjct: 285 PKIYTIPVPPSNMSQHIGQ-LLTDGKRTDITF-EVDGEVFPAHKVVLAARSPVFRA 338
>04_04_1219 + 31835854-31836105,31836481-31837152
Length = 307
Score = 33.9 bits (74), Expect = 0.080
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +3
Query: 390 GLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
G+L +E AD S GE FR H +LAA S VF+A
Sbjct: 132 GMLHGVEIADVEF-SVGGEPFRAHACVLAARSPVFRA 167
>11_06_0463 + 23879587-23879771,23879783-23881658
Length = 686
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
LL + AD T GE F H+ +LAA S VFKA
Sbjct: 147 LLSTGDGADVTFRVGGGETFAAHRCVLAARSPVFKA 182
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +3
Query: 375 VHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
+H G L E A + DGE F H+ ILAA S VF+A
Sbjct: 499 LHRHLGDLLASEAAADVRFNVDGEAFAAHRCILAARSPVFRA 540
>10_08_0051 + 14489255-14490403
Length = 382
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 390 GLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
GLL++ + AD T GE+ R H+ ILAA S VFKA
Sbjct: 192 GLLESGDGADVTF-HVAGEEVRAHRYILAARSPVFKA 227
>06_01_1008 - 7853089-7854147
Length = 352
Score = 33.5 bits (73), Expect = 0.11
Identities = 23/46 (50%), Positives = 25/46 (54%)
Frame = +3
Query: 369 LTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
L +H E LL + AD T V GE F HK ILAA S VF A F
Sbjct: 163 LQMHLGELLLSE-KGADVTFVVA-GESFLAHKIILAARSPVFMAEF 206
>11_06_0466 + 23903000-23904041,23905282-23905672,23905708-23906188
Length = 637
Score = 33.1 bits (72), Expect = 0.14
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
LL + AD T GE F H+ +LAA S VFKA
Sbjct: 205 LLSAGDGADVTFRVAGGEAFTAHRCVLAARSPVFKA 240
>08_02_1309 - 26029691-26030609,26030850-26030925,26032198-26032579
Length = 458
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
L+ + E + + DGE F H+A+LAA S VF+A
Sbjct: 266 LILDYEATNHCAILVDGETFPAHRAVLAARSPVFRA 301
>11_06_0464 + 23894893-23895077,23895148-23895706
Length = 247
Score = 32.7 bits (71), Expect = 0.18
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
LL + AD T GE F H+ +LAA S VF+A
Sbjct: 164 LLSTGDGADVTFRVAGGEAFAAHRCVLAARSPVFRA 199
>10_08_0052 - 14491990-14493108
Length = 372
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 390 GLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
GLL++ + AD T GE R H+ ILAA S VFKA
Sbjct: 188 GLLESGDGADVTF-RVAGEDVRAHRYILAARSPVFKA 223
>09_02_0527 + 10234622-10235773
Length = 383
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 396 LKNLEDADFTLV--SEDGEKFRVHKAILAAHSDVFKAM 503
+ N +D+ T V DGE+F H+ ++AA S+VF+++
Sbjct: 177 MSNKKDSTLTDVCFDVDGERFNAHRLVMAAQSEVFRSL 214
>08_02_0286 - 15326876-15328135
Length = 419
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 390 GLLKNLED---ADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
GL + LED AD T V GE+FR H+ +LAA S V A
Sbjct: 181 GLRRMLEDGTGADVTFVVR-GERFRAHRCVLAARSPVLLA 219
>08_02_1301 - 25977012-25978037
Length = 341
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 390 GLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
G++ + +D + S GE F H+A+LAA S VFKA
Sbjct: 163 GIVDRADCSDVSF-SVGGETFHAHRAVLAARSPVFKA 198
>08_02_0624 - 19434168-19435352
Length = 394
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +3
Query: 387 EGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
E L+ + E +D TL E E + H+A+LAA S VF A F
Sbjct: 184 ELLVGSKEGSDVTLQLEQSE-YDAHRAVLAARSPVFSAQF 222
>03_06_0266 +
32746379-32746836,32747898-32748273,32748367-32748640,
32750605-32750789
Length = 430
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA-MFREET 518
F LL N E D + + GEKF H+ +LAA S F++ +F E+
Sbjct: 207 FGTLLDNQEGVD-VICNVAGEKFHAHQLVLAARSSFFRSELFEHES 251
>08_01_0811 -
7872886-7873261,7873446-7873861,7874253-7874262,
7874370-7875334
Length = 588
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +3
Query: 408 EDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
E AD T S DGE F H+ ILA S VF+A
Sbjct: 173 EGADVTF-SVDGELFAAHRVILAMRSPVFRA 202
>10_08_0056 + 14511651-14512775
Length = 374
Score = 31.5 bits (68), Expect = 0.42
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
LL + AD T GE FR H+ +LAA S VF+A
Sbjct: 178 LLDSKHGADVTF-QVGGEAFRAHRYVLAARSPVFRA 212
>08_01_0197 + 1623454-1624566
Length = 370
Score = 31.5 bits (68), Expect = 0.42
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 384 FEGLLKNLEDADFTL-VSEDGEKFRVHKAILAAHSDVFKA 500
F +LK+ AD T V ED FR H+A+LAA S VF A
Sbjct: 185 FAKMLKDGVGADVTFRVGED--TFRAHRAVLAARSPVFHA 222
>08_01_0027 - 195321-195932,197206-197415
Length = 273
Score = 31.5 bits (68), Expect = 0.42
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 324 FPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 503
+P+ I N+ K ++ +L AD T+ + DG + HKAILA+ S VF++M
Sbjct: 79 WPNESIAVQNIASKS-SLGCLSRMLTESIHADVTINTTDGV-LKAHKAILASCSPVFESM 136
Query: 504 F 506
F
Sbjct: 137 F 137
>04_03_0991 - 21500143-21500799,21500834-21501172
Length = 331
Score = 31.5 bits (68), Expect = 0.42
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 390 GLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
GLL E AD T G+ F H+ +LAA S VF+A
Sbjct: 168 GLLATGEGADVTF-EVSGKTFAAHRLVLAARSPVFRA 203
>10_08_0124 + 14992399-14993478
Length = 359
Score = 31.1 bits (67), Expect = 0.56
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA-MFR 509
LL + E D V GE F H+ +LAA S VFKA +FR
Sbjct: 180 LLSSKEGTDIEFVVR-GETFAAHRLVLAARSLVFKAELFR 218
>07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644
Length = 395
Score = 31.1 bits (67), Expect = 0.56
Identities = 26/78 (33%), Positives = 37/78 (47%)
Frame = +3
Query: 273 NLDVGFMKNKSLYIAIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKF 452
N VG +KN+ +PK +++N+ + F LL D + D E+
Sbjct: 147 NCTVGVVKNR-------LETPKNIHINIPPSDMG-RCFNNLLNLRIGCDVSFEVGD-ERV 197
Query: 453 RVHKAILAAHSDVFKAMF 506
+ HK ILAA S VFKA F
Sbjct: 198 QAHKWILAARSPVFKAQF 215
>04_03_0990 - 21481459-21481933,21482140-21482771
Length = 368
Score = 31.1 bits (67), Expect = 0.56
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 390 GLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFK-AMFREET 518
GLL E AD T E G+ F H+ +LAA S VF+ A+F T
Sbjct: 188 GLLATGEGADVTFEVE-GKTFAAHRWVLAARSPVFRVALFGATT 230
>10_08_0119 - 14952786-14953931,14954709-14954831
Length = 422
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
LL + E D V GE F H+ +LAA S VFKA
Sbjct: 242 LLSSKEGTDVEFVV-GGETFAAHRLVLAARSPVFKA 276
>10_08_0053 - 14496494-14497240,14497418-14497501,14497676-14498152
Length = 435
Score = 30.7 bits (66), Expect = 0.74
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 390 GLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
GLL++ + AD T GE+ H+ ILAA S VFKA
Sbjct: 252 GLLESGDGADVTF-HVAGEEVPAHRYILAARSPVFKA 287
>08_01_0657 + 5674907-5674993,5675615-5676583
Length = 351
Score = 30.7 bits (66), Expect = 0.74
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +3
Query: 378 HTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
H LL+ AD TLV G+ F H+AILA+ S VF A
Sbjct: 173 HHLGELLRRGTGADVTLVVS-GKCFPAHRAILASRSPVFMA 212
>08_01_0200 + 1632883-1633913,1634620-1634677
Length = 362
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 408 EDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
E AD T + GE F H+ +LAA S VFKA
Sbjct: 176 EGADVTFAVQ-GETFTAHRLMLAARSPVFKA 205
>08_02_1303 - 26006294-26006513,26006576-26007318
Length = 320
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 411 DADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
DA F + GE F H+A+LAA S VF+A
Sbjct: 167 DASFAV---GGETFHAHRAVLAARSPVFRA 193
>08_02_1121 +
24457413-24457528,24458395-24458552,24458927-24459042,
24459735-24460400
Length = 351
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 417 DFTLVSEDGEKFRVHKAILAAHSDVFKAMFREE 515
D T+ + DG H+AILA+ S VF++MF +
Sbjct: 187 DITINATDGS-IMAHRAILASRSPVFRSMFSHD 218
>08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546
Length = 290
Score = 30.3 bits (65), Expect = 0.98
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 393 LLKNLEDADFTL-VSEDGEKFRVHKAILAAHSDVFKA 500
LL++ E AD T V ED F HK +LA S VFKA
Sbjct: 112 LLESKEAADVTFYVGED--TFAAHKVVLAMRSPVFKA 146
>08_01_0802 - 7754561-7755628
Length = 355
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
LL++ E AD + GE F HK +LA S VFKA
Sbjct: 188 LLESKEGAD-VVFDVAGETFPAHKLVLAMRSPVFKA 222
>04_04_1220 + 31843628-31844755
Length = 375
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
+L+ + AD ++ D + FR H+ +LAA S VF+A
Sbjct: 193 MLRGGDGADVVVLVRD-QPFRAHRCVLAARSPVFRA 227
>02_02_0620 +
12210812-12210997,12212397-12212474,12212744-12212848,
12212998-12213022,12213214-12213266,12213523-12213635,
12213777-12213801,12214560-12214601,12214666-12214726,
12216027-12216043,12217143-12217257,12217431-12218659
Length = 682
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGE-KFRVHKAILAAHSDVFKA 500
LL +++ +D +V E GE +F H+ +LAA S VFKA
Sbjct: 485 LLDSMDGSD--VVFEVGEERFSAHRCVLAARSSVFKA 519
>10_08_0125 - 15000650-15001717
Length = 355
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
F LL + E D + GE F H+ +LAA S VFKA
Sbjct: 165 FGDLLVSKEGTDVKFLV-GGEMFAAHRLVLAARSPVFKA 202
>10_08_0118 + 14948636-14949667,14949893-14949953,14951226-14951977
Length = 614
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
F LL + E D + GE F H+ +LAA S VFKA
Sbjct: 180 FVDLLVSKEGTDVKFLV-GGEMFAAHRLVLAARSPVFKA 217
>10_08_0087 + 14730936-14732027
Length = 363
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
F LL+ + AD L G+ F H+ +LAA S VF+A
Sbjct: 184 FGDLLETEKGADVVL-EVGGQTFAAHRCVLAARSPVFRA 221
>10_08_0063 + 14588177-14589343
Length = 388
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGE----KFRVHKAILAAHSDVFKA 500
LL ++E AD TL GE F H+ +LAA S VF++
Sbjct: 199 LLLSMEGADVTLQVGGGEVETTTFAAHRCVLAARSSVFRS 238
>08_02_1304 - 26008105-26009070
Length = 321
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 441 GEKFRVHKAILAAHSDVFKA 500
GE F H+A+LAA S VF+A
Sbjct: 162 GETFHAHRAVLAARSPVFRA 181
>08_02_1251 - 25592537-25593380,25593589-25593893
Length = 382
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 441 GEKFRVHKAILAAHSDVFKAMFREET 518
GE F H+A+LA S VFKA+ T
Sbjct: 232 GETFHAHRALLAVCSPVFKALLLSST 257
>05_04_0228 -
19224901-19224991,19225095-19225219,19225293-19225410,
19225554-19225618,19225760-19225839,19225942-19226005,
19227341-19227480,19227571-19227694,19227781-19227840,
19227922-19227990,19228139-19228288,19229182-19229289,
19229573-19229648,19229960-19230054,19231729-19231803,
19231923-19232043,19232136-19232308,19232647-19232813,
19232944-19233301
Length = 752
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 414 ADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
+D T + E G++F H+ L A SD F+AMF
Sbjct: 586 SDVTFLVE-GKRFYAHRIALLASSDAFRAMF 615
>03_05_0727 - 27170082-27170336,27170398-27170793,27171009-27171014
Length = 218
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 411 DADFTLVSEDGEKFRVHKAILAAHSDVFK 497
D L S E F H+A+LAA S VFK
Sbjct: 63 DGSDVLFSVGSETFHAHRAVLAARSPVFK 91
>08_02_1302 - 25990378-25991457
Length = 359
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 390 GLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFK 497
G + D S GE F H+A+LAA S VF+
Sbjct: 172 GAMVGSADGSDVSFSVGGETFHAHRAVLAARSPVFR 207
>10_08_0055 - 14505747-14506934
Length = 395
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 390 GLLKNLE-DADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
GLL E AD T + GE F H+ +LAA S VF+A
Sbjct: 190 GLLAAKELGADVTFLVA-GETFTAHRCVLAARSPVFRA 226
>09_04_0623 - 19038777-19040561
Length = 594
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 321 AFPSPKILNLN-VFDKLLTVHTFEGLLKNL 407
A P LNL VFD++LTV T+ GL K++
Sbjct: 461 AAPKGSSLNLQGVFDRILTVATYGGLAKDM 490
>05_06_0113 + 25708994-25709114,25709276-25709733
Length = 192
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 411 DADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
D F + G +F H+ +LAA S VFKA
Sbjct: 45 DVAFEVGGGGGVRFAAHRCVLAARSKVFKA 74
>10_08_0088 + 14734585-14734762,14735876-14736729
Length = 343
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
F LL+ + AD + G+ F H+ +LAA S VF+A
Sbjct: 164 FGDLLETEKGAD-VVFEVGGQTFAAHRCVLAARSPVFRA 201
>10_08_0079 + 14704086-14705195
Length = 369
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
F LL+ + AD + G+ F H+ +LAA S VF+A
Sbjct: 189 FGDLLETEKGAD-VVFEVGGQTFAAHRCVLAARSPVFRA 226
>09_02_0123 +
4537231-4537366,4538088-4538171,4538432-4538586,
4539115-4539294,4539814-4540169,4540797-4540953
Length = 355
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 186 NTRENSNSTQIEGEPELGCLEYVSTYNFSNLDVGF 290
++++NS+ ++EG E CL Y ++ +L V F
Sbjct: 74 SSQKNSHLQKLEGAKERLCLNYADVMDYDSLSVAF 108
>09_02_0037 +
3251066-3251086,3251143-3251151,3251249-3251436,
3252117-3252148,3252458-3252492,3252693-3253334
Length = 308
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 432 SEDGEKFRVHKAILAAHSDVFK 497
S GE F H A+LAA S VFK
Sbjct: 142 SVGGEMFHAHHAVLAARSPVFK 163
>02_04_0471 +
23192001-23192102,23192229-23192356,23192440-23193108,
23193900-23194086
Length = 361
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 414 ADFTLVSEDGEKFRVHKAILAAHSDVFKAMFRE 512
AD +V+ DG R H ++LA+ S V + M +
Sbjct: 15 ADVRVVTADGSGIRAHSSVLASASPVLERMIEQ 47
>02_02_0613 - 12145489-12145590,12145698-12145761,12146180-12146721
Length = 235
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +3
Query: 450 FRVHKAILAAHSDVFKAMF 506
F HK ILAA S VFKA F
Sbjct: 15 FSAHKCILAARSSVFKAEF 33
>09_02_0528 + 10253372-10254556
Length = 394
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 396 LKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
+ N D DG+ F H+ I+A S+VF+A
Sbjct: 179 MSNGRDLTDVCFDVDGKSFHAHRLIMARQSEVFRA 213
>10_08_0078 + 14699588-14700645,14700739-14700874,14701076-14701096
Length = 404
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
LL+ + AD + GE+F H+ +LAA S VF A
Sbjct: 190 LLETEKGAD-VVFEVAGERFAAHRCVLAARSPVFGA 224
>10_08_0077 + 14690894-14691030,14691258-14691936
Length = 271
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
LL+ + AD + GE+F H+ +LAA S VF A
Sbjct: 105 LLETEKGAD-VVFEVAGERFAAHRCVLAARSPVFGA 139
>10_08_0068 + 14624376-14624975,14625113-14625601
Length = 362
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
F LL + + AD +KF H+++LAA S VFKA
Sbjct: 185 FGDLLLSKQGADVKF-QVGKKKFDAHRSVLAARSPVFKA 222
>04_03_0994 - 21514495-21515610
Length = 371
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 390 GLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVF 494
GLL AD T DG+ F H+ +LAA S VF
Sbjct: 190 GLLATGVGADVTF-EVDGKTFLAHRNVLAARSPVF 223
>11_06_0465 + 23900454-23901530
Length = 358
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 441 GEKFRVHKAILAAHSDVFKA 500
GE F H+ +LAA S VF+A
Sbjct: 200 GETFPAHRCVLAARSPVFRA 219
>10_08_0131 - 15078894-15079617,15079898-15080016
Length = 280
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 441 GEKFRVHKAILAAHSDVFKA 500
GE F H+ +LAA S VFKA
Sbjct: 108 GEMFAAHRLVLAARSLVFKA 127
>09_06_0192 -
21450158-21450276,21451084-21451573,21451750-21451862,
21451992-21452376,21452461-21452529,21453165-21453264,
21454465-21454637,21454737-21454782,21454879-21454954,
21455160-21455196,21455799-21456041
Length = 616
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 93 SISISYGSEMEIDKKQKIVRLTKSLKEYKFENTRENSNSTQIEGEPEL 236
S ++ Y S I +Q R + L + FEN R++S++++ E EPE+
Sbjct: 233 SNAMCYNSPDTIYYRQ--ARAIQELAKKDFENLRQDSDASEPEPEPEI 278
>04_04_0031 -
22289078-22289521,22289702-22289754,22289839-22290092,
22290189-22290604,22290683-22290970
Length = 484
Score = 27.5 bits (58), Expect = 6.9
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +3
Query: 30 EQVGDIFLLHIFIQRYCEGSFSISISYGSEMEIDKKQKIVRLTKSLKEYK--FENTRENS 203
E + D + HI + +F+++ S GS I + +++RL + YK +N R+N+
Sbjct: 293 EDLPDELIFHINYLGADQPTFTLNFSKGSNQIIAQYYQLIRL--GFEGYKDIMQNCRDNA 350
Query: 204 NSTQIEGEPELGCLEYVSTYNFSNLDVGFMKNKSLY 311
+ EG + G + VS + L +K+ S Y
Sbjct: 351 TVLR-EGIEKTGHFDVVSKDSGVPLVAFSLKDSSRY 385
>12_02_1035 - 25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +3
Query: 30 EQVGDIFLLHIFIQRYCEGSFSISISYGSEMEIDKKQKIVRLTKSLKEYKFENTRENSNS 209
+++GD+ L + ++++ + SI S GSE+ +++ + R TK LK + N
Sbjct: 959 KKLGDLQLENNYLEKELSKTMSICDSSGSEIGAGRRRTMRRDTKLLKSGRKSQQESTVNI 1018
Query: 210 TQ 215
Q
Sbjct: 1019 EQ 1020
>11_02_0105 -
8336309-8336392,8336514-8336579,8337279-8337431,
8337511-8337633,8337989-8338075,8338832-8338984,
8339069-8339152,8339252-8339320,8339622-8339705,
8339836-8340052,8341034-8341239
Length = 441
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 261 YNFSNLDVGFMKNKSLYIAIAFPSPKILN--LNVFDKLLTVHTFEGLLK 401
YN +L VG K+K+L+ + + KIL + +KL+ V + L K
Sbjct: 99 YNIESLAVGLNKDKALFTIVVSGTEKILKQVVEQLNKLVNVIQVDDLSK 147
>10_08_0058 + 14521922-14522779
Length = 285
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
F LL + + AD GE H+A+LAA S VF+A
Sbjct: 124 FADLLASGDGADVEF-RVGGETVAAHRAVLAARSRVFRA 161
>02_04_0564 +
23905196-23905413,23905631-23905766,23906005-23906082,
23906627-23906710,23906826-23906894,23906974-23907057,
23907143-23907301,23907922-23908008,23908398-23908502,
23908579-23908701,23908780-23908932,23909248-23909313,
23909398-23909499
Length = 487
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 261 YNFSNLDVGFMKNKSLYIAIAFPSPKILN--LNVFDKLLTVHTFE 389
YN +L VG K+K+++ + + ++LN + +KL+ V E
Sbjct: 76 YNIESLAVGLNKDKAMFTIVVSGTDRVLNQVIEQLNKLVNVLNLE 120
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,922,071
Number of Sequences: 37544
Number of extensions: 236177
Number of successful extensions: 641
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -