Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313B05f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36) 40 0.001
SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45) 36 0.015
SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30) 36 0.027
SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.047
SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30) 34 0.062
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36) 34 0.082
SB_9607| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0) 33 0.14
SB_48929| Best HMM Match : BTB (HMM E-Value=1.4e-15) 33 0.14
SB_38111| Best HMM Match : Kelch_1 (HMM E-Value=0) 32 0.33
SB_33742| Best HMM Match : Kelch_1 (HMM E-Value=0) 32 0.33
SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_40853| Best HMM Match : BTB (HMM E-Value=1.4e-17) 31 0.76
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 30 1.3
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_38787| Best HMM Match : Nop17p (HMM E-Value=0.34) 29 1.8
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 1.8
SB_25077| Best HMM Match : BTB (HMM E-Value=1.4e-10) 29 1.8
SB_37879| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_17029| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_37912| Best HMM Match : BTB (HMM E-Value=3.6e-13) 29 3.1
SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.1
SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13) 29 3.1
SB_39376| Best HMM Match : Alpha-amylase_C (HMM E-Value=0.49) 28 4.1
SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07) 28 4.1
SB_41424| Best HMM Match : TBCC (HMM E-Value=0.57) 28 5.4
SB_33437| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_9355| Best HMM Match : rve (HMM E-Value=4.8e-35) 28 5.4
SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38) 27 7.1
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 27 7.1
>SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36)
Length = 398
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMFREE 515
LL N +D L++ G +F+ HKAILAA S VF AMF E
Sbjct: 216 LLDNATFSDTVLIA-GGREFKAHKAILAARSPVFSAMFEHE 255
>SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45)
Length = 554
Score = 36.3 bits (80), Expect = 0.015
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 417 DFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
D L++EDG++ HK +L+A S+ F+AMF
Sbjct: 27 DVVLMTEDGQEIDAHKLVLSASSEYFRAMF 56
>SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 35.9 bits (79), Expect = 0.020
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 399 KNLEDADFTLVSEDGEKFRV--HKAILAAHSDVFKAMF 506
+ D +F++++ DGEK + HK +LA S VF+AMF
Sbjct: 22 RTFSDVEFSVMNADGEKVSIPAHKYVLATSSPVFEAMF 59
>SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 35.9 bits (79), Expect = 0.020
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +3
Query: 372 TVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
T FE KN + D +V D ++ R HK +LA+ SD F AMF
Sbjct: 20 TFMRFEDFRKNSQLCDIKIVIGD-KRIRAHKLVLASFSDYFSAMF 63
>SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30)
Length = 176
Score = 35.5 bits (78), Expect = 0.027
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +3
Query: 318 IAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFK 497
+A S + NV L + T + + + E D TL D + F HK +LAA+S F+
Sbjct: 1 MADSSKSVAEENVLHPLEFLQTLDKMRVSGEGCDVTLKVTD-QSFPGHKLVLAANSTYFR 59
Query: 498 AMFRE 512
AMF E
Sbjct: 60 AMFGE 64
>SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 34.7 bits (76), Expect = 0.047
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +3
Query: 408 EDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
E D TL +EDG VH+ +LAA S F+AMF
Sbjct: 80 ELCDVTLETEDGLSIAVHRNVLAAVSPYFRAMF 112
>SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30)
Length = 619
Score = 34.3 bits (75), Expect = 0.062
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +3
Query: 318 IAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFK 497
+A S + NV L + T + + + E D TL D + F HK +LAA+S F+
Sbjct: 43 MADSSKSVAEENVLHPLEFLQTLDKMRVSGEGCDVTLKVTD-QSFPGHKLVLAANSTYFR 101
Query: 498 AMF 506
AMF
Sbjct: 102 AMF 104
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 34.3 bits (75), Expect = 0.062
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 417 DFTLVSEDGEKFRVHKAILAAHSDVFKAMFREE 515
D TL + + F HK +LAA SD FKA+F E
Sbjct: 30 DITLKTTSEDIFPAHKIVLAAKSDYFKALFTTE 62
>SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36)
Length = 574
Score = 33.9 bits (74), Expect = 0.082
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Frame = +3
Query: 330 SPKILNLNVFDKLLTVHTFEGLL-KNLED-------ADFTLVSEDGEKFRVHKAILAAHS 485
+PK L+ N L+ EGLL K+L D D L+ E+ E+F HK ILAA+S
Sbjct: 10 APKSLSKNTHPTLM-----EGLLLKSLNDQRQSKILCDVVLLVEN-EEFSAHKGILAANS 63
Query: 486 DVFKAMFREETI 521
F AMF + I
Sbjct: 64 HYFMAMFTTDMI 75
>SB_9607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 33.9 bits (74), Expect = 0.082
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 399 KNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMFREE 515
K +D+D L E+ E F VHK IL S VFKAMF E
Sbjct: 23 KPWDDSDIILEVEEQE-FYVHKMILKMASPVFKAMFDSE 60
>SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 595
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +3
Query: 438 DGEKFRVHKAILAAHSDVFKAMF 506
DG +F HK ILAA SD F AMF
Sbjct: 41 DGHEFPAHKNILAASSDYFMAMF 63
>SB_48929| Best HMM Match : BTB (HMM E-Value=1.4e-15)
Length = 239
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 408 EDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
+++D LV E+ E F VHK IL S VFKAMF
Sbjct: 16 DESDVILVVEEQE-FHVHKFILKMASPVFKAMF 47
>SB_38111| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 548
Score = 31.9 bits (69), Expect = 0.33
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +3
Query: 309 YIAIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSD 488
Y+A P PKI N L+ K+ + T+V +G+ F H+ +LAA S
Sbjct: 17 YMAFISPKPKIPEANYCVALM--QCLNDFRKHNVLCEVTIVV-NGKPFYAHRNVLAAASP 73
Query: 489 VFKAMF 506
F+AMF
Sbjct: 74 YFRAMF 79
>SB_33742| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 570
Score = 31.9 bits (69), Expect = 0.33
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +3
Query: 309 YIAIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSD 488
Y+A P PKI N L+ K+ + T+V +G+ F H+ +LAA S
Sbjct: 17 YMAFISPKPKIPEANYCVALM--QCLNDFRKHNVLCEVTIVV-NGKPFYAHRNVLAAASP 73
Query: 489 VFKAMF 506
F+AMF
Sbjct: 74 YFRAMF 79
>SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSE--DGEKFRVHKAILAAHSDVFKAMF 506
+E L + LE DF V G++F H+AIL S F +MF
Sbjct: 77 YEFLRRTLESGDFADVCFVIHGQRFCAHRAILTTRSSYFASMF 119
>SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +3
Query: 375 VHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 503
++T + N E +D T V E GE F HK ILA S FK M
Sbjct: 477 IYTGADYVNNQEMSDVTFVVE-GEPFYGHKIILATASPRFKQM 518
>SB_40853| Best HMM Match : BTB (HMM E-Value=1.4e-17)
Length = 259
Score = 30.7 bits (66), Expect = 0.76
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 414 ADFTLVSEDGEKFRVHKAILAAHSDVFKAMFRE 512
+D LV E+ + F VHK+ L+ S VF+ MFRE
Sbjct: 17 SDAVLVVEE-KHFNVHKSTLSMWSPVFEKMFRE 48
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 42 DIFLLHIFIQRYCEGSFSISISYGSEMEIDKKQKIVRLTKSLKEYKFENTREN 200
DIFLLHI I+R C +FS+ + +I K + + + E+ REN
Sbjct: 281 DIFLLHINIERRCVNNFSLVTFFPDAKDIAVKIIDIETQRKIGEW-LPLVREN 332
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 411 DADFTLVSEDGE--KFRVHKAILAAHSDVFKAMF 506
D +F + DG +F HK +L+ S VF+AMF
Sbjct: 28 DIEFLITKADGTEVRFPAHKFVLSVSSPVFEAMF 61
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 30 EQVGDIFLLHIFIQRYCEGSFSISISYGSEMEIDK--KQKIVRLTKSLKEYKFENTRENS 203
E V + F L +I++ G+ S S S + +K + ++R TK+ + + ++NS
Sbjct: 332 EDVNEEFDLEKYIRKLERGTSS-SEDDASSVTSEKLINRAVLRATKNFRRANVDTVKQNS 390
Query: 204 NSTQIEGEPEL 236
+S + EPE+
Sbjct: 391 DSESSDSEPEV 401
>SB_38787| Best HMM Match : Nop17p (HMM E-Value=0.34)
Length = 438
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -2
Query: 517 VSSLNIALNTSLCAARMALCTLNFSPSS 434
+S +N T+ CAAR +CTL+F PS+
Sbjct: 409 ISCINARKRTA-CAARKVICTLSFVPSA 435
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 399 KNLEDADFTLVSEDGEKFRV-HKAILAAHSDVFKAMF 506
K L D F + E G+ F HK ILA S VF AMF
Sbjct: 2758 KLLSDVSFRVGKEQGKYFIPGHKLILAISSPVFYAMF 2794
>SB_25077| Best HMM Match : BTB (HMM E-Value=1.4e-10)
Length = 292
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 399 KNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMFREETI 521
K + +D L ++ +KF VH A LA S VF+ + E +
Sbjct: 53 KQWKRSDAVLTVDNNQKFHVHTATLARVSPVFEELLTPENL 93
>SB_37879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 270 SNLDVGFMKNKSLYIAIAFPSPKILNLNVFDKLLTVHTFEGLL 398
++L G + S+ +AIAF + LN+F L + T G+L
Sbjct: 460 ASLSAGTFSSMSISVAIAFVVMLLTTLNIFISLYAIITIVGIL 502
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 393 LLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 503
L ++ E D T + E KF H+ ILAA S+ F+A+
Sbjct: 25 LYQSRELTDVTFIVEK-TKFTAHRVILAARSEYFRAL 60
>SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 399 KNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
+N ++ L+ D E+ HK +LAA S F+AMF
Sbjct: 27 RNSKELCDVLLCVDDEEIPSHKLVLAASSPYFRAMF 62
>SB_17029| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 411 DADFTLVSEDGE--KFRVHKAILAAHSDVFKAMF 506
D +F +V +GE K HK ILA S VF++ F
Sbjct: 25 DIEFAVVKSNGELDKIPAHKFILAIGSPVFESQF 58
>SB_37912| Best HMM Match : BTB (HMM E-Value=3.6e-13)
Length = 470
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 414 ADFTLVSEDGEKFRVHKAILAAHSDVFKAMFRE 512
+D L+ E+ ++ VH++ILA S VF+ MF E
Sbjct: 2 SDVVLLVEE-QRMHVHQSILAMWSTVFEEMFNE 33
>SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1741
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 111 GSEMEIDKK-QKIVRLTKSLKEYKFENTRENSNST 212
GSE +K K VRL +L E + ENT+ + N++
Sbjct: 524 GSEQNCSEKVSKTVRLNNTLVEKRIENTKHDKNAS 558
>SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13)
Length = 133
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +3
Query: 429 VSEDGEKFRV--HKAILAAHSDVFKAMF 506
++ DGEK + HK +LA S VF+AMF
Sbjct: 1 MNADGEKVSIPAHKYVLATSSPVFEAMF 28
>SB_39376| Best HMM Match : Alpha-amylase_C (HMM E-Value=0.49)
Length = 679
Score = 28.3 bits (60), Expect = 4.1
Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 3/127 (2%)
Frame = +3
Query: 111 GSEMEIDKKQKIVRLTKSLKEYKFENTRENSNSTQIEGEPELGCLEYVSTYNFSNLDVGF 290
G +E+D K+ + + + N +EN+ EGE + Y + + F
Sbjct: 7 GPPLEVDGIDKLDLMEEEKQHTLRANGQENNEGNNAEGEDKDNTPPLKPYYFWDPYEAAF 66
Query: 291 MKNKSLYIAIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDA---DFTLVSEDGEKFRVH 461
M + Y + +I F L +++ +++N +A D + + G VH
Sbjct: 67 MATEPAYTVDKY--ARIYFPVTFAVLNSIYWIVDIIRNAVNAGEGDAVIFTGSGCTAAVH 124
Query: 462 KAILAAH 482
K I A H
Sbjct: 125 KLIHALH 131
>SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07)
Length = 887
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 12 WFTSKTEQVGDIFLLHIFIQRYCEGSFSISISYGSEMEIDKKQKIVRLTKSLKEYKFENT 191
W+ + T+QVG LHI + + YG+ +IDK +++ K +Y F+
Sbjct: 447 WYDAFTDQVG---ALHIDDLGLMPSACEVYQQYGTTNQIDKPRRVCFGGKVYADYYFDYA 503
Query: 192 RE 197
R+
Sbjct: 504 RK 505
>SB_41424| Best HMM Match : TBCC (HMM E-Value=0.57)
Length = 285
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +3
Query: 36 VGDIFLLHIFIQRYCEGSFSISISYGSEMEIDKKQKIVRLTKSLKEYKFENTRENSNSTQ 215
VG + H+ + CE S +++ SE+ +D K+V + + T+E+S +TQ
Sbjct: 170 VGPNVVYHVKLAHNCESS---AVAETSEIVLDIPDKLVYASFAANSGSLAVTKESSPATQ 226
Query: 216 IEGEPELGCLEYVSTYNFSNLDVGFMKNKSL 308
++ G + + +F N+ F +SL
Sbjct: 227 LKF--SAGLMNFTDVVDF-NITFTFDSARSL 254
>SB_33437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 27.9 bits (59), Expect = 5.4
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Frame = +3
Query: 87 SFSISISYGSEMEIDKKQKIVRLTKSLKEYKFENTRENSNSTQIEGEP-ELGCLEYVSTY 263
S S S+ + E + V EY + R +ST EG P L +S Y
Sbjct: 96 SLSKSVKHSPHCESVSESSTVHTVSHHYEYTWLRNRGVDSSTLFEGTPLSLHADITISLY 155
Query: 264 N--------FSNLDVGFMKNKSLYI 314
F N D+GF+K SL++
Sbjct: 156 KDAIEKVPLFQNKDIGFVKMLSLHV 180
>SB_9355| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1520
Score = 27.9 bits (59), Expect = 5.4
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Frame = +3
Query: 135 KQKIVRLTKSLKEYK--FENTRENSNSTQIEGEPELGCL------EYVSTYNFSNLDVGF 290
K+K + K LK+ K E T+ NSN +G+P + L E Y + G
Sbjct: 453 KKKGHIVAKCLKKAKKSSETTKPNSNHHPKQGKPAIHVLDTDKEIEDEDIYPLFAVSQGN 512
Query: 291 MKNKSLYIAIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRV 458
+N S S ++ ++FD+L + EG NL+D TL + GE V
Sbjct: 513 RQNPSNGTDTG-ASLSVIGEDIFDQLKNI---EGSSLNLQDTKLTLKTYTGETIPV 564
>SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38)
Length = 518
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 503
F+ L + E D TL + GE+ + H+ +LAA S F+AM
Sbjct: 29 FKELRDDGELLDVTLHVQ-GEEIKAHRVVLAACSPYFRAM 67
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/44 (25%), Positives = 27/44 (61%)
Frame = +3
Query: 99 SISYGSEMEIDKKQKIVRLTKSLKEYKFENTRENSNSTQIEGEP 230
S+S +E+ +++K ++ K L++ K + ++ + +TQ+ G P
Sbjct: 1461 SVSTSAELLVNEKGAAPKIEKPLQDVKVDAGKKATFNTQVSGTP 1504
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,519,763
Number of Sequences: 59808
Number of extensions: 301217
Number of successful extensions: 713
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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