Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313B05f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical p... 40 0.001
Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical pr... 40 0.001
U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical p... 37 0.008
AC006648-10|AAF39859.1| 305|Caenorhabditis elegans Btb and math... 36 0.018
U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical pr... 34 0.071
AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical... 32 0.29
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 31 0.38
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 31 0.38
AF125463-4|AAD12862.1| 243|Caenorhabditis elegans Hypothetical ... 31 0.38
AF025457-1|AAB70964.2| 277|Caenorhabditis elegans Hypothetical ... 31 0.38
AF016684-3|AAB66209.2| 157|Caenorhabditis elegans Hypothetical ... 31 0.50
AF025457-5|AAB70962.1| 235|Caenorhabditis elegans Hypothetical ... 31 0.66
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 30 0.87
AF040659-9|AAK39391.1| 344|Caenorhabditis elegans Hypothetical ... 30 0.87
AF047655-6|AAC04398.1| 195|Caenorhabditis elegans Hypothetical ... 29 1.5
Z83233-7|CAB05764.2| 340|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z82062-4|CAB04888.1| 266|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z82062-3|CAB04892.1| 384|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF024501-6|AAN65317.1| 321|Caenorhabditis elegans Hypothetical ... 29 2.0
AF016684-6|AAB66210.1| 272|Caenorhabditis elegans Hypothetical ... 29 2.0
AF016658-4|AAB66043.1| 242|Caenorhabditis elegans Hypothetical ... 29 2.0
AF016441-8|AAB65913.2| 212|Caenorhabditis elegans Hypothetical ... 29 2.0
AC006648-9|AAF39858.2| 306|Caenorhabditis elegans Btb and math ... 29 2.0
Z81519-2|CAB04217.1| 468|Caenorhabditis elegans Hypothetical pr... 29 2.7
L15201-1|AAA27946.2| 273|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z68009-3|CAA92005.1| 817|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF040645-6|AAB94976.1| 301|Caenorhabditis elegans Hypothetical ... 28 3.5
AF024501-7|AAN65319.1| 304|Caenorhabditis elegans Hypothetical ... 28 3.5
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 28 4.7
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 28 4.7
AF024501-8|AAN65318.1| 550|Caenorhabditis elegans Hypothetical ... 28 4.7
Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 27 6.2
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 27 6.2
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 27 6.2
AF025471-10|AAB71059.1| 326|Caenorhabditis elegans Hypothetical... 27 6.2
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 27 8.1
Z70034-8|CAA93857.1| 586|Caenorhabditis elegans Hypothetical pr... 27 8.1
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 27 8.1
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 27 8.1
AC006648-8|AAF39857.1| 302|Caenorhabditis elegans Btb and math ... 27 8.1
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +3
Query: 387 EGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMFREET 518
E L ++ + ADFTLV E+ E + HKAILAA S VF AM T
Sbjct: 194 ENLYRSGKHADFTLVVEERE-LKAHKAILAARSPVFAAMMEPHT 236
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +3
Query: 387 EGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMFREET 518
E L ++ + ADFTLV E+ E + HKAILAA S VF AM T
Sbjct: 201 ENLYRSGKHADFTLVVEERE-LKAHKAILAARSPVFAAMMEPHT 243
>AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical
protein C05C8.6 protein.
Length = 581
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3
Query: 291 MKNKSLYIAIAFPSPKILNLNVFDKLLTV-HTFEGLLKNLEDADFTLVSEDGEKFRVHKA 467
M+ +S I+ F + +N +V L + +F+ + + + +D TLV +DG +F H+
Sbjct: 22 MRTESAAISNNFNAVNSVNKSVVQHLDELSQSFDEIFTSTDHSDVTLVLDDGTEFAAHRL 81
Query: 468 ILAAHSDVFKAM 503
ILA S F+AM
Sbjct: 82 ILAVRSSFFRAM 93
>Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical
protein T16H12.5b protein.
Length = 409
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +3
Query: 390 GLLKNLEDADFTLVSEDG-----EKFRVHKAILAAHSDVFKAMF 506
GL N + +DFTLV + + F +HKAILAA S VF AMF
Sbjct: 215 GLFDNKQFSDFTLVCKSDLGSPTQTFHIHKAILAARSRVFSAMF 258
>Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical
protein T16H12.5a protein.
Length = 451
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +3
Query: 390 GLLKNLEDADFTLVSEDG-----EKFRVHKAILAAHSDVFKAMF 506
GL N + +DFTLV + + F +HKAILAA S VF AMF
Sbjct: 257 GLFDNKQFSDFTLVCKSDLGSPTQTFHIHKAILAARSRVFSAMF 300
>U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical
protein F37A4.9 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.008
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 315 AIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVF 494
+++ P+ K L + D+ F L E +DF +V+ G +F H ILAA S+ F
Sbjct: 202 SLSSPNTKCLKI---DESSAHDAFTEFLSTGEFSDFIIVASCGREFPTHMCILAARSEYF 258
Query: 495 KAMFREET 518
K + R +
Sbjct: 259 KVLLRNHS 266
>AC006648-10|AAF39859.1| 305|Caenorhabditis elegans Btb and math
domain containingprotein 5 protein.
Length = 305
Score = 35.9 bits (79), Expect = 0.018
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +3
Query: 336 KILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
KI+NL K T+ TF+ N E +D L ED EKF V K LA+HS FK +F
Sbjct: 125 KIINLMGIPKK-TLRTFDE--SNEEFSDVILTVED-EKFYVLKQFLASHSSHFKTLF 177
>U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical
protein T25D10.5 protein.
Length = 288
Score = 33.9 bits (74), Expect = 0.071
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 381 TFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
T E L K E D LV G K V+KA+L+ HS+ F+A+F
Sbjct: 119 TLEELFKPSERNDAVLVI-GGTKMHVNKALLSFHSEYFRALF 159
>AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical
protein Y105E8B.4 protein.
Length = 402
Score = 31.9 bits (69), Expect = 0.29
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = +3
Query: 393 LLKNLEDADFTLVSE--DGEK--FRVHKAILAAHSDVFKAM 503
+L + + D T+V+ DGE+ FRVH L AHSDVF+ M
Sbjct: 215 MLASGDGTDMTIVAGPLDGEREQFRVHAYKLRAHSDVFQMM 255
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 31.5 bits (68), Expect = 0.38
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 417 DFTLVSEDGEKFRVHKAILAAHSDVFKAMFREE 515
DF ++ +G+ R HKA+LAA S VF AM +
Sbjct: 202 DFA-INVNGKIIRAHKAVLAARSPVFNAMLTHQ 233
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 31.5 bits (68), Expect = 0.38
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 417 DFTLVSEDGEKFRVHKAILAAHSDVFKAMFREE 515
DF ++ +G+ R HKA+LAA S VF AM +
Sbjct: 202 DFA-INVNGKIIRAHKAVLAARSPVFNAMLTHQ 233
>AF125463-4|AAD12862.1| 243|Caenorhabditis elegans Hypothetical
protein Y49F6C.5 protein.
Length = 243
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +3
Query: 408 EDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
E +D L ED EKF V K LA+HS FK++F
Sbjct: 116 EFSDVILAVED-EKFYVLKKFLASHSSYFKSLF 147
>AF025457-1|AAB70964.2| 277|Caenorhabditis elegans Hypothetical
protein C08E3.3 protein.
Length = 277
Score = 31.5 bits (68), Expect = 0.38
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 336 KILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 503
KI++ F+K + V F+ +K E +D LV ++ +F V K LAA S FKA+
Sbjct: 125 KIIDTWGFEKKVKVRNFDEAMK--EFSDVVLVVKE-TRFHVAKLFLAAQSGYFKAL 177
>AF016684-3|AAB66209.2| 157|Caenorhabditis elegans Hypothetical
protein F45C12.10a protein.
Length = 157
Score = 31.1 bits (67), Expect = 0.50
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +3
Query: 339 ILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 503
IL+ + F+K + F+ +K E +D LV +D KF V K LAA S+ FKA+
Sbjct: 53 ILDTSGFEKKEKLRNFDESMK--EFSDVVLVVKD-VKFYVLKTYLAAQSNYFKAL 104
>AF025457-5|AAB70962.1| 235|Caenorhabditis elegans Hypothetical
protein C08E3.2 protein.
Length = 235
Score = 30.7 bits (66), Expect = 0.66
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 387 EGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
EG++ D + ++ + ++ V+KA L+ HSD F A+F
Sbjct: 66 EGIINLPSDKNDAILLVEEQQLHVNKAFLSFHSDYFSALF 105
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 30.3 bits (65), Expect = 0.87
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 69 QRYCEGSFSISISYGSEMEIDKKQKIVRLTKSLKE 173
+R S S S YG+ I++K+KIV L + LKE
Sbjct: 487 ERLVHQSLSKSTEYGARESIEEKKKIVELEELLKE 521
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 30.3 bits (65), Expect = 0.87
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 69 QRYCEGSFSISISYGSEMEIDKKQKIVRLTKSLKE 173
+R S S S YG+ I++K+KIV L + LKE
Sbjct: 487 ERLVHQSLSKSTEYGARESIEEKKKIVELEELLKE 521
>AF040659-9|AAK39391.1| 344|Caenorhabditis elegans Hypothetical
protein ZK484.7 protein.
Length = 344
Score = 30.3 bits (65), Expect = 0.87
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +3
Query: 3 ADFWFTSKTEQVGDIFLLHIFIQ---RYCEGSFSISISYGSEMEIDKKQKIVRLTKSLKE 173
ADFW+ E+V IF+L ++ + C F+ E E +K KI+ +S +
Sbjct: 133 ADFWYMCLQEKVDSIFMLCNIMEKGAKKCCDYFACKDKPVLEFE-EKGHKIIVKFESTGK 191
Query: 174 YKFE-NTRENSNSTQIEGEPELGCLEYVSTYNF 269
KFE NT T E G + V+ Y++
Sbjct: 192 MKFEKNTDAKITETVFTVEGPGGLAQKVTQYHW 224
>AF047655-6|AAC04398.1| 195|Caenorhabditis elegans Hypothetical
protein C17B7.4 protein.
Length = 195
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 232 SGSPSICVELLFSLVFSNLYSFSDFVNRTIF 140
SG+ + C EL F F LY F DF+ + F
Sbjct: 29 SGTGTNCTELTFKKFFVCLYRFGDFMTKMYF 59
>Z83233-7|CAB05764.2| 340|Caenorhabditis elegans Hypothetical
protein K06B4.7 protein.
Length = 340
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -2
Query: 487 SLCAARMALCTLNFSPSSDTKVKSASSKFLSNPSKV*TVNNLSKTFRF 344
+ C+A C +N+S S+ T+ S F V +NNLS +F
Sbjct: 273 AFCSALFRYCQINYSKSAPTRFTELLSLFGIVNKSVDNMNNLSMMLQF 320
>Z82062-4|CAB04888.1| 266|Caenorhabditis elegans Hypothetical
protein W02A11.8 protein.
Length = 266
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 411 DADFTLVSEDGEKFRVHKAILAAHSDVFKAMFR 509
D +++ EKF V K LAA S FK +F+
Sbjct: 110 DVSDVVINVQNEKFHVSKMFLAAQSSHFKLLFK 142
>Z82062-3|CAB04892.1| 384|Caenorhabditis elegans Hypothetical
protein W02A11.5 protein.
Length = 384
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 408 EDADFTLVSEDGEKFRVHKAILAAHSDVFKAMFR 509
E +D ++ +D EKF V K LAA S FK +F+
Sbjct: 315 EVSDAVMIVKD-EKFHVSKMFLAAQSSNFKLLFK 347
>AF024501-6|AAN65317.1| 321|Caenorhabditis elegans Hypothetical
protein F39E9.11 protein.
Length = 321
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 381 TFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
+F+ + + + D LV + K V+KA L+ HSD F+A+F
Sbjct: 152 SFDEMFLSSKKNDAVLVIGE-RKLHVNKAFLSYHSDYFRALF 192
>AF016684-6|AAB66210.1| 272|Caenorhabditis elegans Hypothetical
protein F45C12.12 protein.
Length = 272
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 441 GEKFRVHKAILAAHSDVFKAMF 506
GEK V+KA L+ HSD F +F
Sbjct: 143 GEKLHVNKAFLSFHSDFFHELF 164
>AF016658-4|AAB66043.1| 242|Caenorhabditis elegans Hypothetical
protein B0047.3 protein.
Length = 242
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 408 EDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
E+ +V+ EKF V K LA+HS FK +F
Sbjct: 72 EEFSDVVVAVGNEKFYVLKVYLASHSTYFKTLF 104
>AF016441-8|AAB65913.2| 212|Caenorhabditis elegans Hypothetical
protein M03F8.6 protein.
Length = 212
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 81 EGSFSISISYGSEMEIDKKQKIVR-LTKSLKEYKFENTRENSNSTQIEGEPELGCLEYVS 257
+G+FS+ Y + +++D+K K+ + LT + + T E N I + E+ E++S
Sbjct: 122 DGTFSLRQKYQATLDLDEKNKLFQDLTLVISSFNNYGT-ERINYNLISSKSEVKNYEHIS 180
Query: 258 TYNFS 272
+ S
Sbjct: 181 LHKVS 185
>AC006648-9|AAF39858.2| 306|Caenorhabditis elegans Btb and math
domain containingprotein 3 protein.
Length = 306
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 408 EDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 503
E +D L ED EKF V K LA+HS F A+
Sbjct: 148 EFSDVVLAVED-EKFHVLKKFLASHSTYFNAL 178
>Z81519-2|CAB04217.1| 468|Caenorhabditis elegans Hypothetical
protein F29C12.5 protein.
Length = 468
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +3
Query: 402 NLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMFRE 512
N E +D V E KF V K ILA+HS FK +F E
Sbjct: 300 NKEFSDVIFVVEHN-KFYVLKQILASHSSHFKKIFVE 335
>L15201-1|AAA27946.2| 273|Caenorhabditis elegans Hypothetical
protein C08C3.2 protein.
Length = 273
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 414 ADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
+D LV D EKF V K LA+HS F A+F
Sbjct: 147 SDVILVVGD-EKFYVLKLFLASHSSYFNALF 176
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 93 SISISYGSEMEIDKKQKIVRLTKSLKEYKFENTRENSNSTQIEGEPE 233
S+S S + EI+ +++ V+LTK L + K T + +S + +GE +
Sbjct: 555 SMSDSEKEKAEIENRKRRVKLTKKLIKEKRGQTSNDRSSDEDDGEQQ 601
>Z68009-3|CAA92005.1| 817|Caenorhabditis elegans Hypothetical
protein R09A8.3 protein.
Length = 817
Score = 28.3 bits (60), Expect = 3.5
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = +3
Query: 360 DKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMFREE 515
D L ++TF +N E D L ++ E F VHK +LAA S MF EE
Sbjct: 79 DLLDRLNTFR---RNRELCDAVLFVKEREIF-VHKVVLAAVSPALLDMFNEE 126
>AF040645-6|AAB94976.1| 301|Caenorhabditis elegans Hypothetical
protein F52C6.10 protein.
Length = 301
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 402 NLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 503
N + +D L ED EKF V K LA+HS FK +
Sbjct: 141 NKKFSDVILAIED-EKFYVLKKFLASHSTYFKTL 173
>AF024501-7|AAN65319.1| 304|Caenorhabditis elegans Hypothetical
protein F39E9.2 protein.
Length = 304
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 387 EGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
E L + ++ F ++ E K V+KA L+ HSD F+A+F
Sbjct: 138 EMFLPSEKNDAFLVIGE--RKLHVNKAFLSYHSDYFQALF 175
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 441 GEKFRVHKAILAAHSDVFKAMF 506
G R H+ ILAA S FKAMF
Sbjct: 119 GSVIRAHRYILAAASPYFKAMF 140
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 441 GEKFRVHKAILAAHSDVFKAMF 506
G R H+ ILAA S FKAMF
Sbjct: 119 GSVIRAHRYILAAASPYFKAMF 140
>AF024501-8|AAN65318.1| 550|Caenorhabditis elegans Hypothetical
protein F39E9.12 protein.
Length = 550
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 447 KFRVHKAILAAHSDVFKAMF 506
K V+KA L+ HSD F+A+F
Sbjct: 402 KIHVNKAFLSYHSDYFRALF 421
>Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 84 GSFSISISYGSEMEIDKKQKIVRLTKSLKEYKFENTRENSNSTQIEGEPE 233
GSF I+ S + + +I L K++KE KFE +++ + E E
Sbjct: 814 GSFHITEKQFSIKAANNQLEIENLKKTIKELKFETLKKHEELGALRDEKE 863
>Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 84 GSFSISISYGSEMEIDKKQKIVRLTKSLKEYKFENTRENSNSTQIEGEPE 233
GSF I+ S + + +I L K++KE KFE +++ + E E
Sbjct: 814 GSFHITEKQFSIKAANNQLEIENLKKTIKELKFETLKKHEELGALRDEKE 863
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 444 EKFRVHKAILAAHSDVFKAMFR 509
+ F H+ ILAAHS F A+F+
Sbjct: 51 KSFAAHRNILAAHSPYFDAIFK 72
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 444 EKFRVHKAILAAHSDVFKAMFR 509
+ F H+ ILAAHS F A+F+
Sbjct: 51 KSFAAHRNILAAHSPYFDAIFK 72
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 444 EKFRVHKAILAAHSDVFKAMFR 509
+ F H+ ILAAHS F A+F+
Sbjct: 51 KSFAAHRNILAAHSPYFDAIFK 72
>AF025471-10|AAB71059.1| 326|Caenorhabditis elegans Hypothetical
protein R52.1 protein.
Length = 326
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 399 KNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAM 503
K+ E+ ++ G+KF V K LA+HS F A+
Sbjct: 143 KSAEEFSDVVLEVGGKKFYVLKKFLASHSTYFNAL 177
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 499 ALNTSLCAARMALCTLNFSPSSDTKVKSASSKFLSNPS 386
A+ T CAA +LC+ + SS + S SS + S
Sbjct: 155 AIKTQYCAATCSLCSSSSDSSSSSSTASTSSSCTDSAS 192
>Z70034-8|CAA93857.1| 586|Caenorhabditis elegans Hypothetical
protein C18E9.8 protein.
Length = 586
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 396 LKNLEDADFTLVSEDGEKFRVHKAILAAHSD 488
L E+ D + +DG + RVH IL+ SD
Sbjct: 163 LPTFEEGDEVIEFDDGSRIRVHSNILSLLSD 193
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +3
Query: 240 CLEYVSTYNFSNLDVGFMKNKSLYIAIAFPSPKILNLNVFDKLLTVHTFEGL-LKNLEDA 416
C ++ S+ F++ F ++ + P + + L + D+ + F GL D+
Sbjct: 69 CTDFKSSSTFTSQ---FERSGESVVHEWLPGGRHVQLEI-DQTIHESQFSGLDFSQPFDS 124
Query: 417 DFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
++ + E+F VH +L+ S FK +F
Sbjct: 125 SNVVLKVEDEEFHVHTFVLSMASQYFKVLF 154
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 336 KILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDG 443
K L V DKL + F KN EDA + EDG
Sbjct: 3439 KQLGSAVGDKLAALAAFNAARKNAEDALLDITREDG 3474
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 336 KILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDG 443
K L V DKL + F KN EDA + EDG
Sbjct: 4342 KQLGSAVGDKLAALAAFNAARKNAEDALLDITREDG 4377
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 336 KILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDG 443
K L V DKL + F KN EDA + EDG
Sbjct: 5296 KQLGSAVGDKLAALAAFNAARKNAEDALLDITREDG 5331
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 336 KILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDG 443
K L V DKL + F KN EDA + EDG
Sbjct: 6199 KQLGSAVGDKLAALAAFNAARKNAEDALLDITREDG 6234
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 336 KILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDG 443
K L V DKL + F KN EDA + EDG
Sbjct: 7102 KQLGSAVGDKLAALAAFNAARKNAEDALLDITREDG 7137
>AC006648-8|AAF39857.1| 302|Caenorhabditis elegans Btb and math
domain containingprotein 1 protein.
Length = 302
Score = 27.1 bits (57), Expect = 8.1
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Frame = +3
Query: 240 CLEYVSTYNFSNLDVGFMKNKSLYIAIAFPSPKILNLNVFDKLLTVHTFEGL----LKNL 407
CL + STY F ++ GF + K + + + + + + + G+ L++
Sbjct: 80 CLSHSSTYIFQSIG-GFGRRKFVSWDTLVKDHLVNDSIIMEATVMITKMTGISKKKLRSF 138
Query: 408 EDA-----DFTLVSEDGEKFRVHKAILAAHSDVFKAM 503
E + D L ED +KF V + LA+HS FK++
Sbjct: 139 EKSEEQFSDVVLAVED-KKFFVLRKFLASHSSYFKSL 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,182,451
Number of Sequences: 27780
Number of extensions: 251795
Number of successful extensions: 790
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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