Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313B05f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 45 3e-05
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 40 8e-04
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 40 0.001
At3g06190.2 68416.m00712 speckle-type POZ protein-related simila... 34 0.067
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 34 0.067
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 33 0.15
At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Conta... 32 0.27
At5g48510.1 68418.m05998 speckle-type POZ protein-related contai... 31 0.47
At4g04090.1 68417.m00578 speckle-type POZ protein-related contai... 31 0.47
At2g40440.1 68415.m04990 BTB/POZ domain-containing protein conta... 31 0.47
At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ... 31 0.62
At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Inter... 31 0.62
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 30 0.82
At4g19660.1 68417.m02888 ankyrin repeat family protein / BTB/POZ... 30 1.1
At1g64280.1 68414.m07284 regulatory protein (NPR1) identical to ... 30 1.1
At1g04210.1 68414.m00411 leucine-rich repeat family protein / pr... 30 1.1
At5g19000.1 68418.m02257 speckle-type POZ protein-related contai... 29 1.9
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 29 1.9
At3g29740.1 68416.m03755 hypothetical protein 28 3.3
At5g56690.1 68418.m07076 F-box family protein contains F-box dom... 27 7.7
At5g17010.1 68418.m01992 sugar transporter family protein simila... 27 7.7
At5g16290.2 68418.m01904 acetolactate synthase small subunit, pu... 27 7.7
At5g16290.1 68418.m01903 acetolactate synthase small subunit, pu... 27 7.7
At3g56230.1 68416.m06249 speckle-type POZ protein-related contai... 27 7.7
At3g45380.1 68416.m04899 hypothetical protein contains Pfam prof... 27 7.7
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +3
Query: 333 PKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
P++L+++V D L H F LL L+ +D T GEKF+ HK +LAA S F++MF
Sbjct: 179 PRLLSIHVPDSELGSH-FGKLLDTLQGSDVTF-DVAGEKFQAHKLVLAARSQFFRSMF 234
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 40.3 bits (90), Expect = 8e-04
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +3
Query: 333 PKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMFRE 512
P++ +++V D L H F LL ++E +D T + GEKF HK +LAA S FK+ F
Sbjct: 172 PQLHSVHVPDSELGSH-FGVLLDSMEGSDITF-NIAGEKFLAHKLVLAARSPFFKSKFFS 229
Query: 513 E 515
E
Sbjct: 230 E 230
>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 465
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/62 (37%), Positives = 38/62 (61%)
Frame = +3
Query: 333 PKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMFRE 512
P++ +++V + H F LL+N + +D T + GEKFR H+ +LAA S VF++ F +
Sbjct: 190 PRLHSIHVPASDIGSH-FGMLLENEDGSDITF-NVSGEKFRAHRLVLAARSPVFESEFLD 247
Query: 513 ET 518
T
Sbjct: 248 VT 249
>At3g06190.2 68416.m00712 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 295
Score = 33.9 bits (74), Expect = 0.067
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
F LL++ + AD T DGE F HK +LAA S VF+A
Sbjct: 192 FGKLLESGKGADVTF-EVDGETFPAHKLVLAARSAVFRA 229
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 33.9 bits (74), Expect = 0.067
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 384 FEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
F LL++ + AD T DGE F HK +LAA S VF+A
Sbjct: 192 FGKLLESGKGADVTF-EVDGETFPAHKLVLAARSAVFRA 229
>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 709
Score = 32.7 bits (71), Expect = 0.15
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 387 EGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
E + N +D T + DG++F HK L A SD+F+AMF
Sbjct: 531 EKFVNNPTMSDVTFLI-DGKQFYAHKIGLVASSDIFRAMF 569
>At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Contains
similarity to gb|AJ000644 SPOP (speckle-type POZ
protein) from Homo sapiens and contains a PF|00651
BTB/POZ domain. ESTs gb|T75841, gb|R89974, gb|R30221,
gb|N96386, gb|T76457, gb|AI100013 and gb|T76456 come
from this gene;supported by full-length
Length = 326
Score = 31.9 bits (69), Expect = 0.27
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 276 LDVGFMKNKSLYIAIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDA---DFTLVSEDGE 446
+DV F+ K + SP + T T + L + LE++ D + + DG
Sbjct: 112 IDVEFLDLKICPVNGGEASPVWPTDATMQSISTQTTLKCLSRMLEESILTDVIIHTADGT 171
Query: 447 KFRVHKAILAAHSDVFKAMFREE 515
HKAIL+A S VFK+MF +
Sbjct: 172 -LSAHKAILSASSTVFKSMFHHD 193
>At5g48510.1 68418.m05998 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 224
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 432 SEDGEKFRVHKAILAAHSDVFKAMF 506
S++G HK ILA+ S+VFK MF
Sbjct: 33 SDEGSAISAHKLILASRSEVFKNMF 57
>At4g04090.1 68417.m00578 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 192
Score = 31.1 bits (67), Expect = 0.47
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +3
Query: 384 FEGLLKNLED--ADFTLVSEDGEK---FRVHKAILAAHSDVFKAMFREE 515
++ LK L++ D L++ D EK HK IL+A S+VF+ MF +
Sbjct: 11 YDEFLKVLKEQQVDVRLMARDSEKDAAISAHKRILSARSEVFEEMFESD 59
>At2g40440.1 68415.m04990 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain;
Length = 194
Score = 31.1 bits (67), Expect = 0.47
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +3
Query: 360 DKLLTVHTFEGLLKNLEDADFTLVSED----GEKFRVHKAILAAHSDVFKAMFREETI 521
+K L V F +LK D L + D G HK +L+A S+VFK M + I
Sbjct: 6 NKELFVGGFAKILKEQRQVDVRLKAGDSGDEGASTSAHKLVLSARSEVFKKMLESDEI 63
>At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 586
Score = 30.7 bits (66), Expect = 0.62
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 324 FPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFT--LVSEDGEKFRVHKAILAAHSDVFK 497
F S N V E LL N D D++ + DG VH+ ILAA S F+
Sbjct: 28 FSSSSASNPEVVSLTKLSSNLEQLLSN-SDCDYSDAEIIVDGVPVGVHRCILAARSKFFQ 86
Query: 498 AMFREE 515
+F++E
Sbjct: 87 DLFKKE 92
>At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 329
Score = 30.7 bits (66), Expect = 0.62
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 417 DFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
D T+ + DG H+A+LAA S VF++MF
Sbjct: 165 DITINASDGS-IGAHRAVLAARSPVFRSMF 193
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 30.3 bits (65), Expect = 0.82
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 375 VHTFEGLLKNLEDADFTLVSEDGEKFRVHKAILAAHSDVFKAMF 506
V+ E + N +D T + E G F H+ L A SD F+AMF
Sbjct: 528 VYLGEQYVNNATLSDVTFLVE-GRTFYAHRICLLASSDAFRAMF 570
>At4g19660.1 68417.m02888 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 601
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 327 PSPKILNLNVFDKLLTVHT-FEGLLKNLEDADFT----LVSEDGEKFRVHKAILAAHSDV 491
PSP + + L + + E LL N D D+T ++ E+ VH+ +LAA S
Sbjct: 22 PSPVVTTYHSAANLEELSSNLEQLLTN-PDCDYTDAEIIIEEEANPVSVHRCVLAARSKF 80
Query: 492 FKAMFREE 515
F +F+++
Sbjct: 81 FLDLFKKD 88
>At1g64280.1 68414.m07284 regulatory protein (NPR1) identical to
regulatory protein NPR1 (nonexpresser of PR genes 1,
NPR1; noninducible immunity 1, Nim1; salicylic acid
insensitive 1, Sai1) [Arabidopsis thaliana]
SWISS-PROT:P93002
Length = 593
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 369 LTVHTFEGLLKNLED--ADFTLVSEDGEKFRVHKAILAAHSDVFKA 500
L ++FE + + +D +D LV DG + H+ +L+A S FK+
Sbjct: 48 LLSNSFESVFDSPDDFYSDAKLVLSDGREVSFHRCVLSARSSFFKS 93
>At1g04210.1 68414.m00411 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1112
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +3
Query: 228 PELGCLEYVSTYNFSNLDVGFMKNKSLYIAIAFPSPKILNLNVFDKLLTVHTFEGLLKNL 407
PE+GCL+ + LD+ F K KSL I + S ++L+ + LL+NL
Sbjct: 170 PEIGCLK-----SLEYLDLSFNKIKSLPNEIGYLSSLTFLKVAHNRLMELSPVLALLQNL 224
Query: 408 EDAD 419
E D
Sbjct: 225 ESLD 228
>At5g19000.1 68418.m02257 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 442
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 438 DGEKFRVHKAILAAHSDVFKA 500
DGE F HK +LA S VF A
Sbjct: 210 DGETFNAHKLVLATRSPVFNA 230
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 444 EKFRVHKAILAAHSDVFKAMF 506
E ++ HK ILAA S VF+A F
Sbjct: 203 ETYKAHKLILAARSPVFRAQF 223
>At3g29740.1 68416.m03755 hypothetical protein
Length = 87
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +3
Query: 360 DKLLTVHTFEGLLKNLEDADFTLVSED----GEKFRVHKAILAAHSDVFKAMFREETI 521
+K L V +LK D L + D G HK +L+A S+VFK + E I
Sbjct: 6 NKELFVGGLARILKEQRQVDVRLKAGDSDQKGVSISAHKLVLSARSEVFKMILETEEI 63
>At5g56690.1 68418.m07076 F-box family protein contains F-box domain
Pfam:PF00646
Length = 402
Score = 27.1 bits (57), Expect = 7.7
Identities = 26/93 (27%), Positives = 42/93 (45%)
Frame = +3
Query: 147 VRLTKSLKEYKFENTRENSNSTQIEGEPELGCLEYVSTYNFSNLDVGFMKNKSLYIAIAF 326
V +T SLK +K + R +S +IE PEL + N L V F K L + + F
Sbjct: 224 VIVTPSLKYFKAFDYRSEISSYKIEKIPELEEADISIERNPEKLFVYFKSIKCLSLQVDF 283
Query: 327 PSPKILNLNVFDKLLTVHTFEGLLKNLEDADFT 425
S + +D + + E L + DA+++
Sbjct: 284 NSKEEPG---YDSGIVFNHLEELTPYINDANWS 313
>At5g17010.1 68418.m01992 sugar transporter family protein similar
to D-xylose proton-symporter [Lactobacillus brevis]
GI:2895856; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 503
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 243 LEYVSTYNFSNLDVGFMKNKSLYIAI 320
L +S YN S++DVG + + SLY A+
Sbjct: 80 LSGISWYNLSSVDVGLVTSGSLYGAL 105
>At5g16290.2 68418.m01904 acetolactate synthase small subunit,
putative similar to gi:5931761 from Nicotiana
plumbaginifolia
Length = 477
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 261 YNFSNLDVGFMKNKSLYIAIAFPSPKILN--LNVFDKLLTVHTFEGLLK 401
YN +L VG ++K+L+ + + K+L + +KL+ V E L K
Sbjct: 102 YNIESLAVGLNEDKALFTIVVLGTDKVLQQVVEQLNKLVNVIKVEDLSK 150
>At5g16290.1 68418.m01903 acetolactate synthase small subunit,
putative similar to gi:5931761 from Nicotiana
plumbaginifolia
Length = 477
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 261 YNFSNLDVGFMKNKSLYIAIAFPSPKILN--LNVFDKLLTVHTFEGLLK 401
YN +L VG ++K+L+ + + K+L + +KL+ V E L K
Sbjct: 102 YNIESLAVGLNEDKALFTIVVLGTDKVLQQVVEQLNKLVNVIKVEDLSK 150
>At3g56230.1 68416.m06249 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 282
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 363 KLLTVHTFEGLLKNLEDADFTLV-SEDGEKFRVHKAILAAHSDVFK 497
+++ + +F K AD L +DG H+A+LA+ S++FK
Sbjct: 94 RIVFLSSFVSGFKEQLHADILLKPGDDGPPIPAHRALLASKSEIFK 139
>At3g45380.1 68416.m04899 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 690
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 345 NLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFRVH-KAILAAHSDVFKAMFRE 512
N+N F K F G + LE + + + G KFRVH ++ L+ + K F+E
Sbjct: 376 NMNGFVKPKAQPCFSGFIVPLEILPYEAIPQLGLKFRVHVRSALSDCPRMCKHKFKE 432
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,182,844
Number of Sequences: 28952
Number of extensions: 220264
Number of successful extensions: 634
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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