Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313B04f
         (484 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    25   0.48 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   4.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   4.5  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   6.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   6.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.9  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 3   VNFYS*KIWNSLYDANFVGNVQCVIIS 83
           V+FY      S Y  NF G++Q +IIS
Sbjct: 110 VHFYYPVATMSFYVLNFFGSIQFIIIS 136


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -1

Query: 295 WMPTTSLNSLSRLKQQ*RRLKITTPWSLLFTQVQ 194
           WMP+T  N L  L      +KI    S+L+   Q
Sbjct: 853 WMPSTMANILDLLMDYEHTVKINENISMLYIGYQ 886


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -1

Query: 295 WMPTTSLNSLSRLKQQ*RRLKITTPWSLLFTQVQ 194
           WMP+T  N L  L      +KI    S+L+   Q
Sbjct: 853 WMPSTMANILDLLMDYEHTVKINENISMLYIGYQ 886


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 186 VLVCTCVNNKDQGVVIFNLLHCCFRREREFNDVVGI 293
           ++VC  V   D+ V I+ L++ C     + ND   I
Sbjct: 288 MIVCPIVWLMDEVVEIYLLVYACASTCEQANDTPSI 323


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 186 VLVCTCVNNKDQGVVIFNLLHCCFRREREFNDVVGI 293
           ++VC  V   D+ V I+ L++ C     + ND   I
Sbjct: 288 MIVCPIVWLMDEVVEIYLLVYACASTCEQANDTPSI 323


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 291 IHAISLRQRLPWVF 332
           +HAI++R    W F
Sbjct: 91  VHAITIRSTFSWTF 104


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 178 LIWCLFALV*TIKTKVLLSSIFFIAASDVR 267
           L+W     +  +    ++  +FF   SDVR
Sbjct: 256 LLWITVTFILLVGDSYIVMYVFFFHLSDVR 285



 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 56 NKIGII*TVPYFL 18
          +KIGI+ TV YF+
Sbjct: 35 SKIGIVQTVAYFV 47


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -1

Query: 295 WMPTTSLNSLSRLKQQ*RRLKITTPWSLLFTQVQ 194
           WMP+T  N L  L      +KI    S+ +   Q
Sbjct: 620 WMPSTMANILDLLMDYEHTVKINENISMPYIGYQ 653


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 171 CSLDMVLVCTCVNNKDQ 221
           C L ++++C CV  + Q
Sbjct: 266 CLLSLIILCDCVVKEAQ 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,525
Number of Sequences: 336
Number of extensions: 1965
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)