Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313B04f
         (484 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...   197   6e-51
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...   197   6e-51
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...   197   6e-51
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...   196   1e-50
BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p pro...    58   6e-09
M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein...    28   5.8  
EF078695-1|ABK63801.1|  786|Drosophila melanogaster Yurt delta p...    28   5.8  
BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p pro...    28   5.8  
BT015265-1|AAT94494.1|  972|Drosophila melanogaster LD33734p pro...    28   5.8  
BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p pro...    28   5.8  
AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p pro...    28   5.8  
AY061133-1|AAL28681.1|  729|Drosophila melanogaster LD11531p pro...    28   5.8  
AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-P...    28   5.8  
AE014297-1692|AAF54951.1|  972|Drosophila melanogaster CG9764-PA...    28   5.8  
AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB...    28   5.8  
AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA...    28   5.8  
AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD...    28   5.8  
AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC...    28   5.8  

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score =  197 bits (481), Expect = 6e-51
 Identities = 90/112 (80%), Positives = 101/112 (90%)
 Frame = -3

Query: 374 HFRXPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSA 195
           HFR P T + PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H  A
Sbjct: 158 HFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRA 217

Query: 194 NKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 39
           NK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRLARDYDALD+ANKIGII
Sbjct: 218 NKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 269


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score =  197 bits (481), Expect = 6e-51
 Identities = 90/112 (80%), Positives = 101/112 (90%)
 Frame = -3

Query: 374 HFRXPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSA 195
           HFR P T + PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H  A
Sbjct: 158 HFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRA 217

Query: 194 NKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 39
           NK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRLARDYDALD+ANKIGII
Sbjct: 218 NKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 269


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score =  197 bits (481), Expect = 6e-51
 Identities = 90/112 (80%), Positives = 101/112 (90%)
 Frame = -3

Query: 374 HFRXPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSA 195
           HFR P T + PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H  A
Sbjct: 166 HFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRA 225

Query: 194 NKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 39
           NK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRLARDYDALD+ANKIGII
Sbjct: 226 NKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 277


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score =  196 bits (479), Expect = 1e-50
 Identities = 90/112 (80%), Positives = 100/112 (89%)
 Frame = -3

Query: 374 HFRXPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSA 195
           HFR P T + PR PKYPRKS+P RNRMDAYNIIK+PLT+EAAMKKIEDNNTLVF+ H  A
Sbjct: 166 HFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRA 225

Query: 194 NKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 39
           NK H++AAV+KLYDI VAKVN LIRPDG+KKAYVRLARDYDALD+ANKIGII
Sbjct: 226 NKSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 277


>BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p
           protein.
          Length = 290

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 34/102 (33%), Positives = 53/102 (51%)
 Frame = -2

Query: 330 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGLYCSHKCKQAPYQGCSQETL*Y 151
           +P+E+ A ++ HG +QHH +P+     +EED   QH GL  +   +Q P    S + L +
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLPHTPARQQEPRACRSAQALRH 222

Query: 150 KCC*SQHTHQA*W*EESVXXXXXXXXRIGRCQQNWHHINCSI 25
           +    +  H A W EE +        R G CQQ+ HHI+ +I
Sbjct: 223 QGGQGERAHPARWPEEGLCAPGARLRRPGHCQQDRHHISAAI 264


>M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein
            protein.
          Length = 1638

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 326  PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 231
            P   LP R R+ D Y IIK P+  +  +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482


>EF078695-1|ABK63801.1|  786|Drosophila melanogaster Yurt delta
           protein.
          Length = 786

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
 Frame = -3

Query: 284 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN--------VAKVNT 129
           +I+K P  S  A + I D N++   ++ + +  H    +K+L + N        +A VNT
Sbjct: 603 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 662

Query: 128 LIRPDGKKKAYVRLAR 81
              P G  K  +  AR
Sbjct: 663 TALPPGNIKCNILKAR 678


>BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p protein.
          Length = 1761

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 238  LKITTPWSLLFTQVQTSTISRLQSRNSMI*MLL 140
            L +  PW L F ++ TS+I R     SM+ +LL
Sbjct: 1124 LTLNEPWKLGFAELSTSSILRQAGDGSMVFILL 1156


>BT015265-1|AAT94494.1|  972|Drosophila melanogaster LD33734p
           protein.
          Length = 972

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
 Frame = -3

Query: 284 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN--------VAKVNT 129
           +I+K P  S  A + I D N++   ++ + +  H    +K+L + N        +A VNT
Sbjct: 603 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 662

Query: 128 LIRPDGKKKAYVRLAR 81
              P G  K  +  AR
Sbjct: 663 TALPPGNIKCNILKAR 678


>BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p protein.
          Length = 1634

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 326  PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 231
            P   LP R R+ D Y IIK P+  +  +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478


>AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p protein.
          Length = 1638

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 326  PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 231
            P   LP R R+ D Y IIK P+  +  +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482


>AY061133-1|AAL28681.1|  729|Drosophila melanogaster LD11531p
           protein.
          Length = 729

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
 Frame = -3

Query: 284 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN--------VAKVNT 129
           +I+K P  S  A + I D N++   ++ + +  H    +K+L + N        +A VNT
Sbjct: 360 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 419

Query: 128 LIRPDGKKKAYVRLAR 81
              P G  K  +  AR
Sbjct: 420 TALPPGNIKCNILKAR 435


>AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-PC,
            isoform C protein.
          Length = 1997

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 238  LKITTPWSLLFTQVQTSTISRLQSRNSMI*MLL 140
            L +  PW L F ++ TS+I R     SM+ +LL
Sbjct: 1360 LTLNEPWKLGFAELSTSSILRQAGDGSMVFILL 1392


>AE014297-1692|AAF54951.1|  972|Drosophila melanogaster CG9764-PA
           protein.
          Length = 972

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
 Frame = -3

Query: 284 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN--------VAKVNT 129
           +I+K P  S  A + I D N++   ++ + +  H    +K+L + N        +A VNT
Sbjct: 603 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 662

Query: 128 LIRPDGKKKAYVRLAR 81
              P G  K  +  AR
Sbjct: 663 TALPPGNIKCNILKAR 678


>AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB,
            isoform B protein.
          Length = 1638

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 326  PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 231
            P   LP R R+ D Y IIK P+  +  +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482


>AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA,
            isoform A protein.
          Length = 1638

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 326  PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 231
            P   LP R R+ D Y IIK P+  +  +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482


>AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD,
            isoform D protein.
          Length = 1634

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 326  PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 231
            P   LP R R+ D Y IIK P+  +  +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478


>AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC,
            isoform C protein.
          Length = 1634

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 326  PRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 231
            P   LP R R+ D Y IIK P+  +  +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,896,103
Number of Sequences: 53049
Number of extensions: 351407
Number of successful extensions: 946
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)