Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313B04f
(484 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical pr... 151 2e-37
U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal prote... 147 3e-36
Z93393-7|CAB07694.1| 383|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr... 29 2.3
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 29 2.3
AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical ... 29 2.3
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 29 2.3
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 29 2.3
U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical pr... 28 3.1
U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical pr... 28 3.1
U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 27 7.1
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 27 7.1
>Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical
protein F52B5.6 protein.
Length = 146
Score = 151 bits (367), Expect = 2e-37
Identities = 72/112 (64%), Positives = 86/112 (76%)
Frame = -3
Query: 374 HFRXPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSA 195
HFR PKT R P+Y RKS P R+++D++ +IK P T+E++MKKIED+NTLVFIV A
Sbjct: 35 HFRRPKTLVTARAPRYARKSAPARDKLDSFAVIKAPHTTESSMKKIEDHNTLVFIVDEKA 94
Query: 194 NKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 39
NKHHIK AV LY++ KVNTLI P +KKAYVRLA DYDALDVANKIG I
Sbjct: 95 NKHHIKRAVHALYNVKAVKVNTLITPLQQKKAYVRLASDYDALDVANKIGFI 146
>U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 25.1 protein.
Length = 147
Score = 147 bits (357), Expect = 3e-36
Identities = 70/112 (62%), Positives = 86/112 (76%)
Frame = -3
Query: 374 HFRXPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSA 195
HFR P T + R ++PRKS PK ++MD + II+ PLT+E+AMKKIE++NTLVFIV A
Sbjct: 36 HFRRPVTLKTARQARFPRKSAPKTSKMDHFRIIQHPLTTESAMKKIEEHNTLVFIVSNDA 95
Query: 194 NKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 39
NK+ IK AV KLY++ KVNTLI P +KKAYVRL DYDALDVANKIG+I
Sbjct: 96 NKYQIKDAVHKLYNVQALKVNTLITPLQQKKAYVRLTADYDALDVANKIGVI 147
>Z93393-7|CAB07694.1| 383|Caenorhabditis elegans Hypothetical
protein Y48E1B.8 protein.
Length = 383
Score = 28.7 bits (61), Expect = 2.3
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 112 PSGLMSVLTLATFIS*SFLTAALIWCLFALV*TIKTKVLLSSIFFIAASDVRGNLMML*A 291
P+GL S+L L F S + W L L+ K++ L ++ ++ A +L L
Sbjct: 4 PAGLQSLLALIFFNRLSLVIFYSFWFLIGLLVLRKSQNALEAVRYVKAHSASVSLDSLEG 63
Query: 292 SMRF--LLGRDF 321
S F LL DF
Sbjct: 64 STEFRQLLEEDF 75
>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical
protein F16B12.6 protein.
Length = 1392
Score = 28.7 bits (61), Expect = 2.3
Identities = 30/118 (25%), Positives = 47/118 (39%)
Frame = -3
Query: 371 FRXPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSAN 192
F P E RHP R+ P+R + +K LT A+ + V +AN
Sbjct: 190 FAHPPDLE--RHPLSKRRGRPRRPQEQLETNVKLKLTRPASKAQRAPPTEPVAARTATAN 247
Query: 191 KHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII*TVPYFL 18
+ HIK ++L D + +G +R R D L ++I +I +FL
Sbjct: 248 QRHIKLFEEEL-DTTPGGESYATVVNGCLTELLRKERIIDLLTNPDEIELIKQAGWFL 304
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = -3
Query: 323 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 159
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 706 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 758
>AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical
protein T01A4.1b protein.
Length = 637
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = -3
Query: 323 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 159
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 79 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 131
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = -3
Query: 323 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 159
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 647 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 699
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = -3
Query: 323 RKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKL 159
+KSL +NR ++ ++ F S +++ I NNT ++ T+ K + A+KKL
Sbjct: 706 KKSLSLKNRKLSFGMVSFKSGSGGSVETIAQNNTQIY-TKTAIFK-GVVVAIKKL 758
>U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical
protein T14E8.1c protein.
Length = 1018
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 39 YDANFVGNVQCVI-ISSESYVRFLLTIRPDECVDFSNIYI 155
YD + Q + I+ ++YV+ ++RPD VDF N+ +
Sbjct: 696 YDMGHMAGRQAQLAINGDNYVKVFRSMRPDLKVDFKNLRV 735
>U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical
protein T14E8.1b protein.
Length = 1030
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 39 YDANFVGNVQCVI-ISSESYVRFLLTIRPDECVDFSNIYI 155
YD + Q + I+ ++YV+ ++RPD VDF N+ +
Sbjct: 696 YDMGHMAGRQAQLAINGDNYVKVFRSMRPDLKVDFKNLRV 735
>U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical
protein T14E8.1a protein.
Length = 1086
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 39 YDANFVGNVQCVI-ISSESYVRFLLTIRPDECVDFSNIYI 155
YD + Q + I+ ++YV+ ++RPD VDF N+ +
Sbjct: 696 YDMGHMAGRQAQLAINGDNYVKVFRSMRPDLKVDFKNLRV 735
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 27.1 bits (57), Expect = 7.1
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = -3
Query: 308 KRNRMDAYNIIKFPLTSE----AAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVA 141
KR +D +N+I FPL +E + ++ + T+V+ +H S I + ++D ++
Sbjct: 505 KRYLVDMFNLICFPLYTEYEQWESRLRVAFDKTIVYNLHLS----EILRCNRPVFDF-LS 559
Query: 140 KVNTLIRPDGKKK-AYVRLARDYDALDVANKIGI 42
K ++++P K+ Y+ + DA A K G+
Sbjct: 560 KNKSMLQPITLKEIVYLIEQSNMDAKSFAVKFGL 593
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 27.1 bits (57), Expect = 7.1
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = -3
Query: 308 KRNRMDAYNIIKFPLTSE----AAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVA 141
KR +D +N+I FPL +E + ++ + T+V+ +H S I + ++D ++
Sbjct: 505 KRYLVDMFNLICFPLYTEYEQWESRLRVAFDKTIVYNLHLS----EILRCNRPVFDF-LS 559
Query: 140 KVNTLIRPDGKKK-AYVRLARDYDALDVANKIGI 42
K ++++P K+ Y+ + DA A K G+
Sbjct: 560 KNKSMLQPITLKEIVYLIEQSNMDAKSFAVKFGL 593
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 27.1 bits (57), Expect = 7.1
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = -3
Query: 308 KRNRMDAYNIIKFPLTSE----AAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVA 141
KR +D +N+I FPL +E + ++ + T+V+ +H S I + ++D ++
Sbjct: 505 KRYLVDMFNLICFPLYTEYEQWESRLRVAFDKTIVYNLHLS----EILRCNRPVFDF-LS 559
Query: 140 KVNTLIRPDGKKK-AYVRLARDYDALDVANKIGI 42
K ++++P K+ Y+ + DA A K G+
Sbjct: 560 KNKSMLQPITLKEIVYLIEQSNMDAKSFAVKFGL 593
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,849,736
Number of Sequences: 27780
Number of extensions: 185082
Number of successful extensions: 570
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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