Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313B03f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8D423 Cluster: GGDEF family protein; n=2; Vibrio vulni...    33   3.0  
UniRef50_Q54V51 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q23F01 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_A3UAX7 Cluster: Probable asparagine synthase, glutamine...    32   6.9  
UniRef50_Q54F92 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  
UniRef50_A0BCW5 Cluster: Chromosome undetermined scaffold_10, wh...    32   6.9  
UniRef50_Q1AK05 Cluster: Telomerase reverse transcriptase; n=7; ...    32   9.2  

>UniRef50_Q8D423 Cluster: GGDEF family protein; n=2; Vibrio
           vulnificus|Rep: GGDEF family protein - Vibrio vulnificus
          Length = 451

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = +2

Query: 221 IAAFDNSRLMYRFA*SYLKM*SQRNFFIIIFMNTFSSRMERKYSFRRF 364
           I A DNS L Y  A +Y  M   RN+F+ +F N  S    R YS +++
Sbjct: 83  IYAIDNSELDYYEAVAYKTMHETRNYFMSLFNNKNSVFYYRSYSGKKY 130


>UniRef50_Q54V51 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 459

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 241 STHVSIRLKLLKNVISKKFLYNHIYEHVF 327
           +  ++ R +L K V + KFL+ HIY +VF
Sbjct: 3   NNEITYRYQLFKKVFNNKFLFKHIYNYVF 31


>UniRef50_Q23F01 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1672

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
 Frame = -1

Query: 296 NFFEITFLS-SFKRIDT*VDYYQRRQSDFWIIIGKSEKTN------Y*LCIPLAVTKLFG 138
           N F +  LS +  +I T +D YQ   + FW+++G  +K N      Y +CI     +   
Sbjct: 69  NCFVLIQLSLNINKISTNIDPYQDNNNKFWVVVGLPQKENNENFLFYAICINDNTYQQLY 128

Query: 137 TTS*INNRLTINLYLMQVLDR 75
           +   I+N L+ +  L   +D+
Sbjct: 129 SNDPIDNTLSSSFALYSTIDQ 149


>UniRef50_A3UAX7 Cluster: Probable asparagine synthase,
           glutamine-hydrolyzing; n=1; Croceibacter atlanticus
           HTCC2559|Rep: Probable asparagine synthase,
           glutamine-hydrolyzing - Croceibacter atlanticus HTCC2559
          Length = 597

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 23/65 (35%), Positives = 37/65 (56%)
 Frame = -3

Query: 363 NRLNEYFLSILLENVFINMIIKKFL*DHIFK*LQANRYMSRLLSKAAI*LLDNYW*IRKN 184
           N+L+E  +S+ L+  ++      F  ++IFK L+    M   L+K AI L+D YW I+K 
Sbjct: 156 NKLSEIAISVYLDCGYVPSPFSIF--ENIFK-LEPGSKMIIDLTKKAI-LIDKYWDIKKT 211

Query: 183 ELLTL 169
           E L +
Sbjct: 212 ETLKI 216


>UniRef50_Q54F92 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 918

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
 Frame = +1

Query: 268 LLKNVISKKFLYNHIYEHVFQ*N-----GKKIFIQTVFVSHKFGEIQFEFXLK 411
           L K+V + K+L N+IY++V++ N     G + + +  F   K+ +  FE+ LK
Sbjct: 15  LYKSVFNNKYLSNYIYDYVYKFNEQISYGGRSYSEDCFKIKKYDQAGFEWCLK 67


>UniRef50_A0BCW5 Cluster: Chromosome undetermined scaffold_10, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_10,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 329

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = -2

Query: 493 NIELQRLPSHTARNLRFRSHRCVMDLTFLXEIQTEFLQIYVTRKPSE*IFSFHSTGKRVH 314
           N+  + +PS     LR RSH   +D   +  ++   LQI+   K  + +      G +VH
Sbjct: 180 NLSFEHVPSRETELLRIRSHNGRIDQQMIRGMKQGNLQIWTKNKLDQGLHITRCFGNKVH 239

Query: 313 K 311
           K
Sbjct: 240 K 240


>UniRef50_Q1AK05 Cluster: Telomerase reverse transcriptase; n=7;
           Phragmipedium longifolium|Rep: Telomerase reverse
           transcriptase - Phragmipedium longifolium
          Length = 714

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = +2

Query: 212 KSQI-AAFDNSRLMYRFA*SYLKM*SQRNFFIIIFMNTFSSRMERKYSFRRFSCHINLEK 388
           ++QI ++F    L+ RF   +L + + R         +F +R++R   FR ++C++N +K
Sbjct: 437 RNQIDSSFKQQNLLLRFIDDFLFISTSRQQ-----ATSFFTRLQR--GFRSYNCYMNYKK 489

Query: 389 FSLNF 403
           F LNF
Sbjct: 490 FGLNF 494


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,330,720
Number of Sequences: 1657284
Number of extensions: 8672385
Number of successful extensions: 14869
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14868
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)