Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313B03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.8  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   6.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.6  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   6.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.7  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 347 YSFRRFSCHINLEKFSLNF 403
           Y+F +FSC + ++  S  F
Sbjct: 146 YAFGKFSCKVMIQSVSFAF 164


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -2

Query: 463 TARNLRFRSHRCVMDLTFLXEIQTEFLQIY 374
           T+R  ++++ R ++   F   I  EF+QI+
Sbjct: 117 TSRGPKWQNRRKILTPAFHFNILQEFIQIF 146



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 461 CMGRKSLQFDISTILK*LLK 520
           C+G+K    +I T+L  +LK
Sbjct: 435 CIGQKFAMLEIKTVLCGILK 454


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 347 YSFRRFSCHINLEKFSLNF 403
           Y+F +FSC + ++  S  F
Sbjct: 379 YAFGKFSCKVMIQSVSFAF 397


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 347 YSFRRFSCHINLEKFSLNF 403
           Y+F +FSC + ++  S  F
Sbjct: 379 YAFGKFSCKVMIQSVSFAF 397


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 114 VNY*PLFNAGFRPYSL 67
           +NY P  + GF PY +
Sbjct: 330 LNYVPHISTGFSPYEI 345


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 465 IQPEILGLGPIGVLW 421
           +Q E  G  PIG+LW
Sbjct: 816 LQCEAKGEKPIGILW 830


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 465 WEGSLCN 485
           WEG+LCN
Sbjct: 98  WEGALCN 104


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 461 CMGRKSLQFDISTILK*LLK 520
           C+G+K    +I T+L  +LK
Sbjct: 435 CIGQKFAMLEIKTVLCGILK 454


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,894
Number of Sequences: 336
Number of extensions: 2484
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)