Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313B03f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   1.4  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    21   5.8  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   7.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.7  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +2

Query: 23  IDMSIQIDLNIIVSFKEYGL 82
           +D+++ +DL+I  + +EYGL
Sbjct: 676 VDVTLPLDLHIQNAIREYGL 695


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 226 GNLTFG*LLVNQKKRIIDFVFH 161
           GN ++G     +K RIID V++
Sbjct: 63  GNFSWGSECTTRKTRIIDVVYN 84


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 451 DFWLYGKEVFAIRYFHHFEMTLE 519
           +F   G+EVFA+ + +   M L+
Sbjct: 204 EFRRMGREVFAVNFMNVMRMKLK 226


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 465 IQPEILGLGPIGVLW 421
           +Q E  G  PIG+LW
Sbjct: 796 LQCEAQGEKPIGILW 810


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,916
Number of Sequences: 438
Number of extensions: 2577
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)