Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313B01f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 163 2e-39
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 163 2e-39
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 157 1e-37
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 103 2e-21
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 101 8e-21
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 98 9e-20
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 96 5e-19
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 89 8e-17
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 73 3e-12
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 69 5e-11
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 68 1e-10
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 63 3e-09
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 50 2e-05
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 40 3e-05
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 40 3e-05
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 44 0.002
UniRef50_UPI0000DAF6F6 Cluster: glucosamine fructose-6-phosphate... 33 3.0
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 33 5.2
UniRef50_A2F5X7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q3A5C8 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
UniRef50_A6UN38 Cluster: Response regulator receiver protein; n=... 32 9.2
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 163 bits (397), Expect = 2e-39
Identities = 83/134 (61%), Positives = 99/134 (73%)
Frame = -3
Query: 519 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 340
GCIVD+ LSVL+LVIV+KG Q+IPGLTD +PRRLGPKR KIRK+FNLSKEDDVR+YV+
Sbjct: 99 GCIVDSQLSVLSLVIVKKGEQDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVI 158
Query: 339 KRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLA 160
+R LP KEGK K + KAPKIQRLVTPVVLQ K A+YAKLLA
Sbjct: 159 RRPLPEKEGK---KAKSKAPKIQRLVTPVVLQRKRKRLALKRQRAQKCKQEAADYAKLLA 215
Query: 159 QRKKESKVRRQEEI 118
+R KE+K +R E++
Sbjct: 216 KRAKEAKEKRHEQL 229
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 163 bits (397), Expect = 2e-39
Identities = 90/134 (67%), Positives = 101/134 (75%)
Frame = -3
Query: 519 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 340
GCIVDANLSVL LVIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV
Sbjct: 99 GCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVV 158
Query: 339 KRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLA 160
++ L KEGK KPR KAPKIQRLVTP VLQ K AEYAKLLA
Sbjct: 159 RKPL-NKEGK---KPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLA 214
Query: 159 QRKKESKVRRQEEI 118
+R KE+K +RQE+I
Sbjct: 215 KRMKEAKEKRQEQI 228
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 157 bits (381), Expect = 1e-37
Identities = 79/134 (58%), Positives = 98/134 (73%)
Frame = -3
Query: 519 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 340
GCIVD NLS LAL++V+KG ++IPGLTD V RRLGPKRAS IRKL+NL+KEDDVR+YVV
Sbjct: 99 GCIVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVV 158
Query: 339 KRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLA 160
KR LP K+GK KPR KAPKIQRL+TPVVLQ K +EAEY K+L
Sbjct: 159 KRPLPEKDGK---KPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILH 215
Query: 159 QRKKESKVRRQEEI 118
R+++ ++RR+ +
Sbjct: 216 LRRRQERIRRRSRL 229
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 103 bits (247), Expect = 2e-21
Identities = 56/129 (43%), Positives = 79/129 (61%)
Frame = -3
Query: 519 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 340
GC++ ++++++ + I + G Q I G+TD PRRLGPKRASKIRKLFNLS+ +DVR+YVV
Sbjct: 102 GCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVV 161
Query: 339 KRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLA 160
+R + K GK K R KAPKIQRL+TP V + EY +L+A
Sbjct: 162 RRRV-VKSGK---KDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIA 217
Query: 159 QRKKESKVR 133
++ + R
Sbjct: 218 SNRRALRQR 226
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 101 bits (243), Expect = 8e-21
Identities = 60/133 (45%), Positives = 75/133 (56%)
Frame = -3
Query: 519 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 340
GCIV +LS L L +V+KG EIPGLTD V ++LGPKRA+KIRKLFNL K DDVR+YV+
Sbjct: 140 GCIVGQDLSALNLTLVKKGTNEIPGLTDKAVGKKLGPKRATKIRKLFNLDKTDDVRKYVI 199
Query: 339 KRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLA 160
R + +N K R PKIQRLVT L K EY K+L
Sbjct: 200 GRAI-----SKNGKNRFIKPKIQRLVTEKRLLRKRTLIAKKEKRRLEKKKVIKEYKKVLN 254
Query: 159 QRKKESKVRRQEE 121
+ + E + E+
Sbjct: 255 KYRNELLTKTDED 267
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 98.3 bits (234), Expect = 9e-20
Identities = 54/128 (42%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
Frame = -3
Query: 519 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRR 349
GCIV ++ VLAL IV+KG EI GLT +PR+LGPKRA+ I+KLF L KEDD +++
Sbjct: 99 GCIVGPDMRVLALQIVKKGVAEIDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKK 158
Query: 348 YVVKRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAK 169
V++R +GK+ R K PKIQRL+TP + +++ EY K
Sbjct: 159 SVIRRTFKTAKGKD----RTKCPKIQRLITPERILRKKVYKAEKTQRYVKTNAAKEEYEK 214
Query: 168 LLAQRKKE 145
L++ KK+
Sbjct: 215 FLSEWKKQ 222
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 95.9 bits (228), Expect = 5e-19
Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 3/90 (3%)
Frame = -3
Query: 519 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRR 349
GCIV ++ VLAL +V+KGA EI GLTD NVPRRLGPKR +K+R+LF K D V++
Sbjct: 99 GCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKADGVAIVQK 158
Query: 348 YVVKRVLPAKEGKENAKPRHKAPKIQRLVT 259
+++R K+GK+ R KAPKIQRLVT
Sbjct: 159 NLIRRTWTTKDGKK----RQKAPKIQRLVT 184
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 88.6 bits (210), Expect = 8e-17
Identities = 50/89 (56%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Frame = -3
Query: 519 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 340
GCIV ++ VLAL +V+KGA EI GLTD NVPRRLGPKR +K+R+LF K D
Sbjct: 104 GCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKAD------- 156
Query: 339 KRVLPAKE-GKEN-AKPRHKAPKIQRLVT 259
RV+ ++E G + K R KAPKIQRLVT
Sbjct: 157 -RVISSEEHGPQRYGKKRQKAPKIQRLVT 184
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 73.3 bits (172), Expect = 3e-12
Identities = 32/62 (51%), Positives = 48/62 (77%)
Frame = -3
Query: 519 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 340
G IV ++SVL ++V+KG EI G+T+ +P R GP+RAS RKLFNLS++DDV+++V+
Sbjct: 98 GAIVAGDISVLNTIVVKKGEGEIEGVTNDALPMRAGPQRASHFRKLFNLSQKDDVKKFVI 157
Query: 339 KR 334
+R
Sbjct: 158 RR 159
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 69.3 bits (162), Expect = 5e-11
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Frame = -3
Query: 519 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNL--SKEDDVRRY 346
GCIV +L L++V+V G + +PGLTD VP+RL PKRASKIR+LF L +K D +
Sbjct: 105 GCIVGPDLHALSVVLVDAGDKTLPGLTDVVVPKRLVPKRASKIRRLFGLPTTKVDPKDQM 164
Query: 345 VVKRV---LPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEY 175
+V + L + +N + + K PK+QR+VT EY
Sbjct: 165 LVCELIKELGHEVTLKNGEKKLKYPKVQRVVTDEKYARKQRVIAEKKEIMRKSLQQLEEY 224
Query: 174 AKLLAQRKKESKVR 133
LL++ K+ +R
Sbjct: 225 KALLSRMGKQHNIR 238
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 68.1 bits (159), Expect = 1e-10
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = -3
Query: 519 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLS-KEDDVRRYV 343
GCI+ +S L V+++KG +EI GLT VPRR GPKRAS +R +F ++ + D + V
Sbjct: 99 GCIISDEISALHCVVLQKGEKEIDGLTTTAVPRRFGPKRASTLRAMFGITDSKFDASKLV 158
Query: 342 VKRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLL 163
+KR K GK +PK+QRL+T + K +Y LL
Sbjct: 159 LKR--EVKPGK------FTSPKVQRLITARRVARKNRMLKERKEKREATKKKAEQYQALL 210
Query: 162 AQRKKE 145
Q++K+
Sbjct: 211 KQQQKQ 216
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 63.3 bits (147), Expect = 3e-09
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Frame = -3
Query: 459 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD-----VRRYVVKRVLP-AKEGKENAK 298
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + R + KR+ KE KE K
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRMKEAKE--K 137
Query: 297 PRHKAPKIQRL 265
+ + K QRL
Sbjct: 138 RQEQIAKRQRL 148
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 50.4 bits (115), Expect = 2e-05
Identities = 32/92 (34%), Positives = 53/92 (57%)
Frame = -3
Query: 519 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 340
GCIV +SVL + ++ ++ +T+ N + L KR+S +RK+ L+K DD+R++ +
Sbjct: 101 GCIVSPEISVLNIKLLTNKNDDLL-ITNKNSEKTLTHKRSSNLRKVLCLTKTDDIRKHYI 159
Query: 339 KRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQ 244
K AK+ K KIQRL+TP+ +Q
Sbjct: 160 K---IAKDFKNKV-------KIQRLITPIKIQ 181
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 39.9 bits (89), Expect(2) = 3e-05
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = -3
Query: 510 VDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRV 331
V+AN+S L LV+++K P RLGP R+S I K++ L +EDD V
Sbjct: 101 VEANVSALTLVVLKKNPS----------PCRLGPVRSSNISKIYYLCEEDD-------EV 143
Query: 330 LPAKEGKENAKPRHKAPK 277
+P K + + K R A K
Sbjct: 144 IPVKLQRRHQKKRQNATK 161
Score = 29.9 bits (64), Expect(2) = 3e-05
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 183 AEYAKLLAQRKKESKVRR 130
AEY KLL +RKKESK R
Sbjct: 165 AEYVKLLVKRKKESKANR 182
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 39.9 bits (89), Expect(2) = 3e-05
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = -3
Query: 510 VDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRV 331
V+AN+S L LV+++K P RLGP R+S I K++ L +EDD V
Sbjct: 48 VEANVSALTLVVLKKNPS----------PCRLGPVRSSNISKIYYLCEEDD-------EV 90
Query: 330 LPAKEGKENAKPRHKAPK 277
+P K + + K R A K
Sbjct: 91 IPVKLQRRHQKKRQNATK 108
Score = 29.9 bits (64), Expect(2) = 3e-05
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 183 AEYAKLLAQRKKESKVRR 130
AEY KLL +RKKESK R
Sbjct: 112 AEYVKLLVKRKKESKANR 129
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 44.0 bits (99), Expect = 0.002
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = -3
Query: 519 GCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 340
G IV + VL L+I+R G +EI GLT+ P++ K+RK+F + E+ +
Sbjct: 84 GSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKMFGVPDEEKNVVGYI 143
Query: 339 KRVLPAK--EGKENAKPRHKAPKIQR 268
+ +L ++ + K+ K RH +++R
Sbjct: 144 RNILKSECDDPKKIPKIRHNGKRMKR 169
>UniRef50_UPI0000DAF6F6 Cluster: glucosamine fructose-6-phosphate
aminotransferase (isomerizing); n=1; Campylobacter
concisus 13826|Rep: glucosamine fructose-6-phosphate
aminotransferase (isomerizing) - Campylobacter concisus
13826
Length = 610
Score = 33.5 bits (73), Expect = 3.0
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 41 NTVDHFCGALWLELLESRIEAERLRLISSWRRTLDSFFLCASNLAYSASED 193
NT+ CGA+WL L + +A L + +T D LC N S D
Sbjct: 168 NTLKKVCGAIWLSLANNAAKASELESVEEILKTNDLKALCFINQKDKLSRD 218
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 33.5 bits (73), Expect = 3.0
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -3
Query: 483 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 343
L+ V +EI LT GNVP+ + R ++RK NLS EDD+ Y+
Sbjct: 494 LLRVNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYL 538
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 32.7 bits (71), Expect = 5.2
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = -3
Query: 498 LSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAK 319
+S+L +VI+ G ++IPG T +R PKR +I+ F++S +K VL K
Sbjct: 95 ISLLNMVIIINGRKDIPGQT-----KRWAPKRWRRIQS-FSVS---------LKTVLSTK 139
Query: 318 --EGKENAKPRHKAPKIQ 271
+ K++ KPR K K+Q
Sbjct: 140 KPQNKDSKKPRPKTHKVQ 157
>UniRef50_A2F5X7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1146
Score = 32.7 bits (71), Expect = 5.2
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 438 DGNVPRRLGPKRASKIRK-LFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQR 268
D + + PK+ S +K + + S EDD K++L + + E KPR K+P+ +R
Sbjct: 1012 DSSDEEEIKPKQKSPQKKPILSSSSEDDAIPPPKKKLLDSSDDDEEIKPRQKSPQKKR 1069
>UniRef50_Q3A5C8 Cluster: Putative uncharacterized protein; n=1;
Pelobacter carbinolicus DSM 2380|Rep: Putative
uncharacterized protein - Pelobacter carbinolicus
(strain DSM 2380 / Gra Bd 1)
Length = 980
Score = 31.9 bits (69), Expect = 9.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 378 NLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLV 262
N +DD+R V +++LPA E PR +I+RLV
Sbjct: 441 NRQVQDDLRFLVTEKILPALPSAERMNPRAALDEIRRLV 479
>UniRef50_A6UN38 Cluster: Response regulator receiver protein; n=1;
Sinorhizobium medicae WSM419|Rep: Response regulator
receiver protein - Sinorhizobium medicae WSM419
Length = 406
Score = 31.9 bits (69), Expect = 9.2
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Frame = -3
Query: 444 LTDGNVPRRLG---PKRASKIRKLFNLSKEDDVRR--YVV 340
L D N+PRRLG P+R + L +L +E D+RR Y+V
Sbjct: 52 LLDVNIPRRLGDRKPQRGGGLELLKDLGRESDLRRPTYIV 91
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,783,511
Number of Sequences: 1657284
Number of extensions: 7479345
Number of successful extensions: 22741
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22720
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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