BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS313A12f (521 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core eudico... 74 2e-12 UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=... 63 3e-09 UniRef50_Q4TE65 Cluster: Chromosome undetermined SCAF5629, whole... 61 1e-08 UniRef50_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA recogniti... 60 3e-08 UniRef50_Q6L3J9 Cluster: Polyprotein, putative; n=1; Solanum dem... 44 0.002 UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to endonuclea... 44 0.003 UniRef50_UPI0000E4898C Cluster: PREDICTED: similar to fibropelli... 44 0.003 UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to endonuclea... 44 0.003 UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea... 43 0.005 UniRef50_Q4SRF1 Cluster: Chromosome undetermined SCAF14527, whol... 40 0.046 UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse tr... 38 0.18 UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos t... 38 0.18 UniRef50_Q0JIG5 Cluster: Os01g0802900 protein; n=1; Oryza sativa... 37 0.24 UniRef50_Q6L4B8 Cluster: Polyprotein, putative; n=1; Solanum dem... 35 0.98 UniRef50_Q01L83 Cluster: OSIGBa0076I14.9 protein; n=6; Oryza sat... 35 1.3 UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu... 33 3.0 UniRef50_A4M4M9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2 UniRef50_A0NWE9 Cluster: Sterol desaturase family protein; n=1; ... 32 6.9 UniRef50_Q4UDY1 Cluster: Putative uncharacterized protein; n=4; ... 32 6.9 >UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core eudicotyledons|Rep: Polyprotein, putative - Solanum demissum (Wild potato) Length = 868 Score = 73.7 bits (173), Expect = 2e-12 Identities = 32/51 (62%), Positives = 38/51 (74%) Frame = -2 Query: 403 HAAEMRMLRWTCGVTRIDRIRNEYVRGSLKVALVTEKLRSARLGWYGHVMK 251 H AEMRMLRW CG TR D+IRNE +R + VA V +KLR ARL W+GHV + Sbjct: 580 HVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKR 630 Score = 46.4 bits (105), Expect = 4e-04 Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Frame = -3 Query: 234 KRVLTMNVEGYR-GRGRPKKKWMDCVKDDMGKRGVSDEMVYDRRVWKEK 91 +R M VEG R GRGRPKK W + ++ D+ ++++M DR+ W+ + Sbjct: 638 RRCEVMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTLDRKEWRSR 686 >UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=6; Papilionoideae|Rep: Reverse transcriptase family member - Glycine max (Soybean) Length = 377 Score = 63.3 bits (147), Expect = 3e-09 Identities = 28/47 (59%), Positives = 34/47 (72%) Frame = -2 Query: 397 AEMRMLRWTCGVTRIDRIRNEYVRGSLKVALVTEKLRSARLGWYGHV 257 AEMRMLRW CG TR D+IRNE +R + VA + EK+ RL W+GHV Sbjct: 266 AEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRLRWFGHV 312 Score = 43.6 bits (98), Expect = 0.003 Identities = 19/43 (44%), Positives = 26/43 (60%) Frame = -3 Query: 201 RGRGRPKKKWMDCVKDDMGKRGVSDEMVYDRRVWKEKTCCADP 73 RGRGRPKK + +K D+ G+ MV DR +W++ ADP Sbjct: 334 RGRGRPKKTIREVIKKDLEINGLDRSMVLDRTLWRKLIHVADP 376 >UniRef50_Q4TE65 Cluster: Chromosome undetermined SCAF5629, whole genome shotgun sequence; n=3; Tetraodon nigroviridis|Rep: Chromosome undetermined SCAF5629, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 73 Score = 61.3 bits (142), Expect = 1e-08 Identities = 25/49 (51%), Positives = 36/49 (73%) Frame = -2 Query: 397 AEMRMLRWTCGVTRIDRIRNEYVRGSLKVALVTEKLRSARLGWYGHVMK 251 AEM+MLR++ GVTR+D I+ EY+RG+ V +K+R RL W+GHV + Sbjct: 21 AEMKMLRFSLGVTRMDEIKKEYIRGTAHVRCFGDKVRETRLRWFGHVQR 69 >UniRef50_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA recognition motif); Calcium-binding EF- hand; n=1; Medicago truncatula|Rep: RNA-binding region RNP-1 (RNA recognition motif); Calcium-binding EF- hand - Medicago truncatula (Barrel medic) Length = 559 Score = 60.1 bits (139), Expect = 3e-08 Identities = 28/47 (59%), Positives = 33/47 (70%) Frame = -2 Query: 397 AEMRMLRWTCGVTRIDRIRNEYVRGSLKVALVTEKLRSARLGWYGHV 257 AEMRMLRW G TR DRIRN+ +R + VA + EKL RL W+GHV Sbjct: 308 AEMRMLRWMSGKTRHDRIRNDTIRERVGVAPIVEKLVENRLRWFGHV 354 >UniRef50_Q6L3J9 Cluster: Polyprotein, putative; n=1; Solanum demissum|Rep: Polyprotein, putative - Solanum demissum (Wild potato) Length = 139 Score = 44.0 bits (99), Expect = 0.002 Identities = 19/41 (46%), Positives = 27/41 (65%) Frame = -2 Query: 397 AEMRMLRWTCGVTRIDRIRNEYVRGSLKVALVTEKLRSARL 275 AEMRM RW C TR D+I N+ + + + +V +K+R ARL Sbjct: 98 AEMRMFRWMCRQTRKDKIGNKDIWSKVGITVVVDKMREARL 138 >UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to endonuclease-reverse transcriptase; n=5; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to endonuclease-reverse transcriptase - Strongylocentrotus purpuratus Length = 1030 Score = 43.6 bits (98), Expect = 0.003 Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%) Frame = -2 Query: 394 EMRMLRWTCGVTRIDRIRNEYVRGSLKVAL-VTEKLRSARLGWYGHVMK*K 245 EM LR GVTR+D+IRN +++ SL + V +K+ + R+ ++GHV++ K Sbjct: 907 EMACLRRIMGVTRLDKIRNTHIKESLNLDQDVMDKVSTKRIKYFGHVLRMK 957 Score = 39.5 bits (88), Expect = 0.046 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Frame = -3 Query: 213 VEGYRGRGRPKKKWMDCVKDDMGKRGV-----SDEMVYDRRVW 100 V G R RGRP K+W+DC+ +D R + + + DR+ W Sbjct: 970 VTGNRPRGRPPKRWLDCISEDCKARSIPRLTDASRLAADRKTW 1012 >UniRef50_UPI0000E4898C Cluster: PREDICTED: similar to fibropellin Ia; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to fibropellin Ia - Strongylocentrotus purpuratus Length = 1096 Score = 43.6 bits (98), Expect = 0.003 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%) Frame = -3 Query: 228 VLTMNVEGYRGRGRPKKKWMDCVKDDMGKRGV-----SDEMVYDRRVWK 97 +L NV G RGRP K+W DC+K D R V + + DR+VW+ Sbjct: 17 LLNENVHGKHPRGRPAKRWTDCIKADCNNRQVDSLTKATRLTEDRKVWR 65 >UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to endonuclease-reverse transcriptase; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to endonuclease-reverse transcriptase - Strongylocentrotus purpuratus Length = 958 Score = 43.6 bits (98), Expect = 0.003 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 5/49 (10%) Frame = -3 Query: 228 VLTMNVEGYRGRGRPKKKWMDCVKDDMGKRGV-----SDEMVYDRRVWK 97 +L N+ G R RGRP K+W DC+K D R V + + DR+VW+ Sbjct: 878 LLNGNIHGKRPRGRPAKRWTDCIKADCKNRQVDSLTKATRLTEDRKVWQ 926 Score = 42.7 bits (96), Expect = 0.005 Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Frame = -2 Query: 403 HAAEMRMLRWTCGVTRIDRIRNEYVRGSLKV-ALVTEKLRSARLGWYGHV 257 H EM LR GVTR DR+RN ++R L + + +++ + RL ++GH+ Sbjct: 817 HTFEMACLRRIMGVTRFDRLRNTHIRTQLNMEETIIDRVATKRLRYFGHI 866 >UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclease-reverse transcriptase, partial; n=7; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to endonuclease-reverse transcriptase, partial - Strongylocentrotus purpuratus Length = 787 Score = 42.7 bits (96), Expect = 0.005 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Frame = -2 Query: 394 EMRMLRWTCGVTRIDRIRNEYVRGSLKV-ALVTEKLRSARLGWYGHVMK 251 EMR LR GV +D+IRNE +R L + + + E++ L W+GHV++ Sbjct: 407 EMRCLRTILGVHLMDKIRNEEIRQRLNIPSTICEEITKRCLKWFGHVLR 455 Score = 31.9 bits (69), Expect = 9.2 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -3 Query: 207 GYRGRGRPKKKWMDCVKDDMG-KRGVSDEMVYDRRVW 100 G R RGRP K+W D V+ D+G +++ DR W Sbjct: 472 GRRPRGRPPKRWKDQVQYDVGLSTQEAEQRAQDRSDW 508 >UniRef50_Q4SRF1 Cluster: Chromosome undetermined SCAF14527, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome undetermined SCAF14527, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 52 Score = 39.5 bits (88), Expect = 0.046 Identities = 17/38 (44%), Positives = 26/38 (68%) Frame = -3 Query: 237 GKRVLTMNVEGYRGRGRPKKKWMDCVKDDMGKRGVSDE 124 G+R+L + + G R RGR K+++MD VK+DM G +E Sbjct: 10 GRRMLRLELPGRRPRGRTKRRFMDVVKEDMKVVGAREE 47 >UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse transcriptase-like; n=6; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to reverse transcriptase-like - Strongylocentrotus purpuratus Length = 415 Score = 37.5 bits (83), Expect = 0.18 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Frame = -3 Query: 231 RVLTMNVEGYRGRGRPKKKWMDCVKDDMGKRGV-SDEMVYDRRVWKEKT-CCAD 76 +++ VEG R RGR +K+W D +K+ G + + DR W++ T CAD Sbjct: 349 QIIESQVEGKRKRGRQRKQWFDNIKEWTGLTYTEAKRLAQDRNNWRKTTRRCAD 402 >UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos taurus|Rep: Reverse transcriptase-like - Bos taurus (Bovine) Length = 335 Score = 37.5 bits (83), Expect = 0.18 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = -3 Query: 234 KRVLTMNVEGYRGRGRPKKKWMDCVKD--DMGKRGVSDEMVYDRRVWKEKTC 85 K ++ +EG R RGR + +W+D + + DMG G+ E+V DR W C Sbjct: 274 KTLMLGKIEGRRRRGRQRMRWLDGIINSMDMGLGGLR-ELVMDRETWCAVVC 324 >UniRef50_Q0JIG5 Cluster: Os01g0802900 protein; n=1; Oryza sativa (japonica cultivar-group)|Rep: Os01g0802900 protein - Oryza sativa subsp. japonica (Rice) Length = 501 Score = 37.1 bits (82), Expect = 0.24 Identities = 23/59 (38%), Positives = 31/59 (52%) Frame = -3 Query: 216 NVEGYRGRGRPKKKWMDCVKDDMGKRGVSDEMVYDRRVWKEKTCCADPR*MGEGQGNDE 40 +V G RGR +++ DC + G +GV E D VW E+ A P + EG GNDE Sbjct: 228 DVHGKRGRLADEQE--DCQVERKGAQGVGAE---DEEVWLERADGAQPGQLDEGPGNDE 281 >UniRef50_Q6L4B8 Cluster: Polyprotein, putative; n=1; Solanum demissum|Rep: Polyprotein, putative - Solanum demissum (Wild potato) Length = 115 Score = 35.1 bits (77), Expect = 0.98 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = -2 Query: 343 RNEYVRGSLKVALVTEKLRSARLGWYGHVMK 251 RNE R + A + +K R ARL W+GHVM+ Sbjct: 53 RNEDFREKVGDASIVDKTRKARLRWFGHVMR 83 >UniRef50_Q01L83 Cluster: OSIGBa0076I14.9 protein; n=6; Oryza sativa|Rep: OSIGBa0076I14.9 protein - Oryza sativa (Rice) Length = 1455 Score = 34.7 bits (76), Expect = 1.3 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Frame = +2 Query: 221 VNTLLPTSFSFHHMSIP--SQTRTSQLLCHKCHFQTSSNIFIPYSIYSRYSTRPSQHSHL 394 VN +P F H IP S R LC+ T+++ PYS + PS H Sbjct: 733 VNNSIP--FQLLHRKIPNYSMLRVFGCLCYPNLSATAAHKLAPYSAACVFLGYPSSHKGY 790 Query: 395 CCMRIAFHQI 424 CC+ I+ +I Sbjct: 791 CCLNISTRRI 800 >UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nubilalis|Rep: Reverse transcriptase - Ostrinia nubilalis (European corn borer) Length = 497 Score = 33.5 bits (73), Expect = 3.0 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = -2 Query: 385 MLRWTCGVTRIDRIRNEYVRGSLKVALVTEKLRSARLGWYGHVMK 251 M R GV+ DRIRNE +R +V + ++ + W GH+ + Sbjct: 387 MERAMLGVSLRDRIRNEEIRRRTRVTDIARRIAKIKWQWAGHIAR 431 >UniRef50_A4M4M9 Cluster: Putative uncharacterized protein; n=1; Geobacter bemidjiensis Bem|Rep: Putative uncharacterized protein - Geobacter bemidjiensis Bem Length = 147 Score = 32.7 bits (71), Expect = 5.2 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -2 Query: 385 MLRWTCGVTRIDRIRNEYVRGSLKVALV-TEKLRSARLGWYGH 260 ++RWT G T I + +R +L L +E + AR+GWYGH Sbjct: 19 VIRWTTGETMQADIGDWMLRFALLEPLKDSEVFKKARVGWYGH 61 >UniRef50_A0NWE9 Cluster: Sterol desaturase family protein; n=1; Stappia aggregata IAM 12614|Rep: Sterol desaturase family protein - Stappia aggregata IAM 12614 Length = 259 Score = 32.3 bits (70), Expect = 6.9 Identities = 13/48 (27%), Positives = 25/48 (52%) Frame = +3 Query: 66 FTWGRRNMFSPSILFYHIPFRRSLPSYPYRLSRNPSISS*VYLFLYIL 209 F WG R + PS+ +H+P RS+ + + ++ + + F Y+L Sbjct: 108 FYWGHRVLHWPSLYRFHVPHHRSIAPTVWSNDSSTTVDTLIEHFFYLL 155 >UniRef50_Q4UDY1 Cluster: Putative uncharacterized protein; n=4; Theileria|Rep: Putative uncharacterized protein - Theileria annulata Length = 2057 Score = 32.3 bits (70), Expect = 6.9 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +1 Query: 283 HFSASLSQVPLSDFL*HIHSVFYLFSLLHTSIATFASLLHANRLSSDN 426 H + ++P+SDF H ++ YL S + T I +LL N ++N Sbjct: 1145 HKYLTCDEIPMSDFPQHFQTILYLSSFMQTGILPNFNLLKHNVKDNEN 1192 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 551,377,549 Number of Sequences: 1657284 Number of extensions: 11295326 Number of successful extensions: 30472 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 29428 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 30450 length of database: 575,637,011 effective HSP length: 95 effective length of database: 418,195,031 effective search space used: 32619212418 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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