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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313A12f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core eudico...    74   2e-12
UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=...    63   3e-09
UniRef50_Q4TE65 Cluster: Chromosome undetermined SCAF5629, whole...    61   1e-08
UniRef50_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA recogniti...    60   3e-08
UniRef50_Q6L3J9 Cluster: Polyprotein, putative; n=1; Solanum dem...    44   0.002
UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to endonuclea...    44   0.003
UniRef50_UPI0000E4898C Cluster: PREDICTED: similar to fibropelli...    44   0.003
UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to endonuclea...    44   0.003
UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea...    43   0.005
UniRef50_Q4SRF1 Cluster: Chromosome undetermined SCAF14527, whol...    40   0.046
UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse tr...    38   0.18 
UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos t...    38   0.18 
UniRef50_Q0JIG5 Cluster: Os01g0802900 protein; n=1; Oryza sativa...    37   0.24 
UniRef50_Q6L4B8 Cluster: Polyprotein, putative; n=1; Solanum dem...    35   0.98 
UniRef50_Q01L83 Cluster: OSIGBa0076I14.9 protein; n=6; Oryza sat...    35   1.3  
UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu...    33   3.0  
UniRef50_A4M4M9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_A0NWE9 Cluster: Sterol desaturase family protein; n=1; ...    32   6.9  
UniRef50_Q4UDY1 Cluster: Putative uncharacterized protein; n=4; ...    32   6.9  

>UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core
           eudicotyledons|Rep: Polyprotein, putative - Solanum
           demissum (Wild potato)
          Length = 868

 Score = 73.7 bits (173), Expect = 2e-12
 Identities = 32/51 (62%), Positives = 38/51 (74%)
 Frame = -2

Query: 403 HAAEMRMLRWTCGVTRIDRIRNEYVRGSLKVALVTEKLRSARLGWYGHVMK 251
           H AEMRMLRW CG TR D+IRNE +R  + VA V +KLR ARL W+GHV +
Sbjct: 580 HVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKR 630



 Score = 46.4 bits (105), Expect = 4e-04
 Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
 Frame = -3

Query: 234 KRVLTMNVEGYR-GRGRPKKKWMDCVKDDMGKRGVSDEMVYDRRVWKEK 91
           +R   M VEG R GRGRPKK W + ++ D+    ++++M  DR+ W+ +
Sbjct: 638 RRCEVMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTLDRKEWRSR 686


>UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=6;
           Papilionoideae|Rep: Reverse transcriptase family member
           - Glycine max (Soybean)
          Length = 377

 Score = 63.3 bits (147), Expect = 3e-09
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = -2

Query: 397 AEMRMLRWTCGVTRIDRIRNEYVRGSLKVALVTEKLRSARLGWYGHV 257
           AEMRMLRW CG TR D+IRNE +R  + VA + EK+   RL W+GHV
Sbjct: 266 AEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRLRWFGHV 312



 Score = 43.6 bits (98), Expect = 0.003
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = -3

Query: 201 RGRGRPKKKWMDCVKDDMGKRGVSDEMVYDRRVWKEKTCCADP 73
           RGRGRPKK   + +K D+   G+   MV DR +W++    ADP
Sbjct: 334 RGRGRPKKTIREVIKKDLEINGLDRSMVLDRTLWRKLIHVADP 376


>UniRef50_Q4TE65 Cluster: Chromosome undetermined SCAF5629, whole
           genome shotgun sequence; n=3; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF5629,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 73

 Score = 61.3 bits (142), Expect = 1e-08
 Identities = 25/49 (51%), Positives = 36/49 (73%)
 Frame = -2

Query: 397 AEMRMLRWTCGVTRIDRIRNEYVRGSLKVALVTEKLRSARLGWYGHVMK 251
           AEM+MLR++ GVTR+D I+ EY+RG+  V    +K+R  RL W+GHV +
Sbjct: 21  AEMKMLRFSLGVTRMDEIKKEYIRGTAHVRCFGDKVRETRLRWFGHVQR 69


>UniRef50_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA recognition
           motif); Calcium-binding EF- hand; n=1; Medicago
           truncatula|Rep: RNA-binding region RNP-1 (RNA
           recognition motif); Calcium-binding EF- hand - Medicago
           truncatula (Barrel medic)
          Length = 559

 Score = 60.1 bits (139), Expect = 3e-08
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = -2

Query: 397 AEMRMLRWTCGVTRIDRIRNEYVRGSLKVALVTEKLRSARLGWYGHV 257
           AEMRMLRW  G TR DRIRN+ +R  + VA + EKL   RL W+GHV
Sbjct: 308 AEMRMLRWMSGKTRHDRIRNDTIRERVGVAPIVEKLVENRLRWFGHV 354


>UniRef50_Q6L3J9 Cluster: Polyprotein, putative; n=1; Solanum
           demissum|Rep: Polyprotein, putative - Solanum demissum
           (Wild potato)
          Length = 139

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 19/41 (46%), Positives = 27/41 (65%)
 Frame = -2

Query: 397 AEMRMLRWTCGVTRIDRIRNEYVRGSLKVALVTEKLRSARL 275
           AEMRM RW C  TR D+I N+ +   + + +V +K+R ARL
Sbjct: 98  AEMRMFRWMCRQTRKDKIGNKDIWSKVGITVVVDKMREARL 138


>UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to
            endonuclease-reverse transcriptase; n=5;
            Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
            endonuclease-reverse transcriptase - Strongylocentrotus
            purpuratus
          Length = 1030

 Score = 43.6 bits (98), Expect = 0.003
 Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
 Frame = -2

Query: 394  EMRMLRWTCGVTRIDRIRNEYVRGSLKVAL-VTEKLRSARLGWYGHVMK*K 245
            EM  LR   GVTR+D+IRN +++ SL +   V +K+ + R+ ++GHV++ K
Sbjct: 907  EMACLRRIMGVTRLDKIRNTHIKESLNLDQDVMDKVSTKRIKYFGHVLRMK 957



 Score = 39.5 bits (88), Expect = 0.046
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = -3

Query: 213  VEGYRGRGRPKKKWMDCVKDDMGKRGV-----SDEMVYDRRVW 100
            V G R RGRP K+W+DC+ +D   R +     +  +  DR+ W
Sbjct: 970  VTGNRPRGRPPKRWLDCISEDCKARSIPRLTDASRLAADRKTW 1012


>UniRef50_UPI0000E4898C Cluster: PREDICTED: similar to fibropellin
           Ia; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to fibropellin Ia - Strongylocentrotus
           purpuratus
          Length = 1096

 Score = 43.6 bits (98), Expect = 0.003
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
 Frame = -3

Query: 228 VLTMNVEGYRGRGRPKKKWMDCVKDDMGKRGV-----SDEMVYDRRVWK 97
           +L  NV G   RGRP K+W DC+K D   R V     +  +  DR+VW+
Sbjct: 17  LLNENVHGKHPRGRPAKRWTDCIKADCNNRQVDSLTKATRLTEDRKVWR 65


>UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to
            endonuclease-reverse transcriptase; n=2;
            Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
            endonuclease-reverse transcriptase - Strongylocentrotus
            purpuratus
          Length = 958

 Score = 43.6 bits (98), Expect = 0.003
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = -3

Query: 228  VLTMNVEGYRGRGRPKKKWMDCVKDDMGKRGV-----SDEMVYDRRVWK 97
            +L  N+ G R RGRP K+W DC+K D   R V     +  +  DR+VW+
Sbjct: 878  LLNGNIHGKRPRGRPAKRWTDCIKADCKNRQVDSLTKATRLTEDRKVWQ 926



 Score = 42.7 bits (96), Expect = 0.005
 Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = -2

Query: 403 HAAEMRMLRWTCGVTRIDRIRNEYVRGSLKV-ALVTEKLRSARLGWYGHV 257
           H  EM  LR   GVTR DR+RN ++R  L +   + +++ + RL ++GH+
Sbjct: 817 HTFEMACLRRIMGVTRFDRLRNTHIRTQLNMEETIIDRVATKRLRYFGHI 866


>UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to
           endonuclease-reverse transcriptase, partial; n=7;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           endonuclease-reverse transcriptase, partial -
           Strongylocentrotus purpuratus
          Length = 787

 Score = 42.7 bits (96), Expect = 0.005
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
 Frame = -2

Query: 394 EMRMLRWTCGVTRIDRIRNEYVRGSLKV-ALVTEKLRSARLGWYGHVMK 251
           EMR LR   GV  +D+IRNE +R  L + + + E++    L W+GHV++
Sbjct: 407 EMRCLRTILGVHLMDKIRNEEIRQRLNIPSTICEEITKRCLKWFGHVLR 455



 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -3

Query: 207 GYRGRGRPKKKWMDCVKDDMG-KRGVSDEMVYDRRVW 100
           G R RGRP K+W D V+ D+G     +++   DR  W
Sbjct: 472 GRRPRGRPPKRWKDQVQYDVGLSTQEAEQRAQDRSDW 508


>UniRef50_Q4SRF1 Cluster: Chromosome undetermined SCAF14527, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF14527,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 52

 Score = 39.5 bits (88), Expect = 0.046
 Identities = 17/38 (44%), Positives = 26/38 (68%)
 Frame = -3

Query: 237 GKRVLTMNVEGYRGRGRPKKKWMDCVKDDMGKRGVSDE 124
           G+R+L + + G R RGR K+++MD VK+DM   G  +E
Sbjct: 10  GRRMLRLELPGRRPRGRTKRRFMDVVKEDMKVVGAREE 47


>UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse
           transcriptase-like; n=6; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to reverse
           transcriptase-like - Strongylocentrotus purpuratus
          Length = 415

 Score = 37.5 bits (83), Expect = 0.18
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = -3

Query: 231 RVLTMNVEGYRGRGRPKKKWMDCVKDDMGKRGV-SDEMVYDRRVWKEKT-CCAD 76
           +++   VEG R RGR +K+W D +K+  G     +  +  DR  W++ T  CAD
Sbjct: 349 QIIESQVEGKRKRGRQRKQWFDNIKEWTGLTYTEAKRLAQDRNNWRKTTRRCAD 402


>UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos
           taurus|Rep: Reverse transcriptase-like - Bos taurus
           (Bovine)
          Length = 335

 Score = 37.5 bits (83), Expect = 0.18
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -3

Query: 234 KRVLTMNVEGYRGRGRPKKKWMDCVKD--DMGKRGVSDEMVYDRRVWKEKTC 85
           K ++   +EG R RGR + +W+D + +  DMG  G+  E+V DR  W    C
Sbjct: 274 KTLMLGKIEGRRRRGRQRMRWLDGIINSMDMGLGGLR-ELVMDRETWCAVVC 324


>UniRef50_Q0JIG5 Cluster: Os01g0802900 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os01g0802900 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 501

 Score = 37.1 bits (82), Expect = 0.24
 Identities = 23/59 (38%), Positives = 31/59 (52%)
 Frame = -3

Query: 216 NVEGYRGRGRPKKKWMDCVKDDMGKRGVSDEMVYDRRVWKEKTCCADPR*MGEGQGNDE 40
           +V G RGR   +++  DC  +  G +GV  E   D  VW E+   A P  + EG GNDE
Sbjct: 228 DVHGKRGRLADEQE--DCQVERKGAQGVGAE---DEEVWLERADGAQPGQLDEGPGNDE 281


>UniRef50_Q6L4B8 Cluster: Polyprotein, putative; n=1; Solanum
           demissum|Rep: Polyprotein, putative - Solanum demissum
           (Wild potato)
          Length = 115

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -2

Query: 343 RNEYVRGSLKVALVTEKLRSARLGWYGHVMK 251
           RNE  R  +  A + +K R ARL W+GHVM+
Sbjct: 53  RNEDFREKVGDASIVDKTRKARLRWFGHVMR 83


>UniRef50_Q01L83 Cluster: OSIGBa0076I14.9 protein; n=6; Oryza
           sativa|Rep: OSIGBa0076I14.9 protein - Oryza sativa
           (Rice)
          Length = 1455

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = +2

Query: 221 VNTLLPTSFSFHHMSIP--SQTRTSQLLCHKCHFQTSSNIFIPYSIYSRYSTRPSQHSHL 394
           VN  +P  F   H  IP  S  R    LC+     T+++   PYS    +   PS H   
Sbjct: 733 VNNSIP--FQLLHRKIPNYSMLRVFGCLCYPNLSATAAHKLAPYSAACVFLGYPSSHKGY 790

Query: 395 CCMRIAFHQI 424
           CC+ I+  +I
Sbjct: 791 CCLNISTRRI 800


>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
           nubilalis|Rep: Reverse transcriptase - Ostrinia
           nubilalis (European corn borer)
          Length = 497

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -2

Query: 385 MLRWTCGVTRIDRIRNEYVRGSLKVALVTEKLRSARLGWYGHVMK 251
           M R   GV+  DRIRNE +R   +V  +  ++   +  W GH+ +
Sbjct: 387 MERAMLGVSLRDRIRNEEIRRRTRVTDIARRIAKIKWQWAGHIAR 431


>UniRef50_A4M4M9 Cluster: Putative uncharacterized protein; n=1;
           Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
           protein - Geobacter bemidjiensis Bem
          Length = 147

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 385 MLRWTCGVTRIDRIRNEYVRGSLKVALV-TEKLRSARLGWYGH 260
           ++RWT G T    I +  +R +L   L  +E  + AR+GWYGH
Sbjct: 19  VIRWTTGETMQADIGDWMLRFALLEPLKDSEVFKKARVGWYGH 61


>UniRef50_A0NWE9 Cluster: Sterol desaturase family protein; n=1;
           Stappia aggregata IAM 12614|Rep: Sterol desaturase
           family protein - Stappia aggregata IAM 12614
          Length = 259

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = +3

Query: 66  FTWGRRNMFSPSILFYHIPFRRSLPSYPYRLSRNPSISS*VYLFLYIL 209
           F WG R +  PS+  +H+P  RS+    +    + ++ + +  F Y+L
Sbjct: 108 FYWGHRVLHWPSLYRFHVPHHRSIAPTVWSNDSSTTVDTLIEHFFYLL 155


>UniRef50_Q4UDY1 Cluster: Putative uncharacterized protein; n=4;
            Theileria|Rep: Putative uncharacterized protein -
            Theileria annulata
          Length = 2057

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +1

Query: 283  HFSASLSQVPLSDFL*HIHSVFYLFSLLHTSIATFASLLHANRLSSDN 426
            H   +  ++P+SDF  H  ++ YL S + T I    +LL  N   ++N
Sbjct: 1145 HKYLTCDEIPMSDFPQHFQTILYLSSFMQTGILPNFNLLKHNVKDNEN 1192


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,377,549
Number of Sequences: 1657284
Number of extensions: 11295326
Number of successful extensions: 30472
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 29428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30450
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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