Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313A12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    29   0.072
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   4.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.2  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        23   6.2  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        23   6.2  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        23   6.2  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        23   6.2  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   6.2  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   6.2  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 29.5 bits (63), Expect = 0.072
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 345 ILSILVTPHVHRNIRI--SAACESPFIR*QNCFVNFKTINFTILVQANQTCSFESN 506
           +L +L T   + N        C  P+ R Q C   F+   + + V+A  TC  E++
Sbjct: 19  LLLVLTTTSANENTHYLPPLECVDPYGRPQRCIPEFENAAYQLQVEATNTCGDETD 74


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 144 KRGVSDEMVYDRRVWKEK 91
           KRG  D+  YDRR  KE+
Sbjct: 532 KRGKKDDKGYDRRSGKEE 549


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 116  MIEEYGRRKHVAPTPGKWEKGRGMMK 39
            M+EE  +RK+ AP  G+ ++G    K
Sbjct: 1860 MLEERFKRKNCAPLKGQPKRGTNTRK 1885


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 398 CMRIAFHQITKLFCEFQNNK 457
           C+R A H+I  + C+  +NK
Sbjct: 75  CIRCAVHEINNIPCQDLDNK 94


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 398 CMRIAFHQITKLFCEFQNNK 457
           C+R A H+I  + C+  +NK
Sbjct: 75  CIRCAVHEINNIPCQDLDNK 94


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 398 CMRIAFHQITKLFCEFQNNK 457
           C+R A H+I  + C+  +NK
Sbjct: 75  CIRCAVHEINNIPCQDLDNK 94


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 398 CMRIAFHQITKLFCEFQNNK 457
           C+R A H+I  + C+  +NK
Sbjct: 75  CIRCAVHEINNIPCQDLDNK 94


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = +2

Query: 236 PTSFSFHHMS----IPSQTRTSQLLCHKCHFQTSSNIFIPYSIYSRYST 370
           P   S+++M+    +PS  +  Q   H  H Q    I    ++YSR S+
Sbjct: 760 PQVISYNNMNNRRIVPSPNQQQQQQHHHHHLQQQQQIVGKNTLYSRNSS 808


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 398 CMRIAFHQITKLFCEFQNNK 457
           C+R A H+I  + C+  +NK
Sbjct: 651 CIRCAVHEINNIPCQDLDNK 670


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,821
Number of Sequences: 2352
Number of extensions: 12203
Number of successful extensions: 32
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)