Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313A10f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 79 3e-15
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 75 6e-14
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 60 1e-09
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 54 9e-08
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 54 9e-08
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 53 3e-07
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 51 8e-07
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 46 3e-05
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 46 3e-05
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 46 3e-05
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 46 3e-05
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 45 7e-05
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 45 7e-05
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 44 1e-04
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 43 2e-04
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 43 3e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 42 5e-04
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 40 0.003
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 34 0.13
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 34 0.13
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 34 0.13
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 33 0.31
AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone rece... 29 5.1
AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2 ... 29 5.1
AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC... 29 5.1
DQ026292-2|AAY89653.1| 536|Drosophila melanogaster cytochrome P... 28 8.8
AY070663-1|AAL48134.1| 536|Drosophila melanogaster RH04586p pro... 28 8.8
AJ890254-1|CAI64834.1| 417|Drosophila melanogaster cytochrome P... 28 8.8
AJ748833-1|CAG38967.1| 536|Drosophila melanogaster cytochrome P... 28 8.8
AE014297-2626|AAF55636.2| 536|Drosophila melanogaster CG6042-PA... 28 8.8
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 79.4 bits (187), Expect = 3e-15
Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 4/160 (2%)
Frame = -2
Query: 484 TDGYAGVALLVHNTIPFDHIPIANHSIDFSIIAVSIN---KICFVSVYIPHPTSSIFDE- 317
T+ + GV LLVH +I H + N +ID IA++I K+ S YI PT +I ++
Sbjct: 59 TNRFGGVRLLVHKSI--QHT-VLNITIDIEAIAINIESKLKLNIFSTYIS-PTKNITNQT 114
Query: 316 IEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATRRTQP 137
+ + P LI GDFN H WGS ++ G +D+ + +LN T +
Sbjct: 115 LHNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHFST- 173
Query: 136 HEGISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 17
H + DL+L +P LA WK L+ + SDH+PI+ TL
Sbjct: 174 HNTYTHIDLTLCSPILAPHAKWKILNDLHGSDHFPIITTL 213
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 74.9 bits (176), Expect = 6e-14
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Frame = -2
Query: 484 TDGYAGVALLVHNTIPFDHIPIANHSIDFSIIAVSINKIC-FVSVYIPHPTSSIFDEIEV 308
T G+ +L+ +P + I N SI S + ++ ++ V+ YIP +I
Sbjct: 63 TSAKQGIGVLIKRNVPHTYRNI-NSSILCSALQLNFEQVINIVNAYIPPSQIFSSSDISE 121
Query: 307 IISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATRRTQPHEG 128
I+ L ++LGD N+ WGS ++ G +I ++ N+ +LN G T H
Sbjct: 122 ILQNLNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPT-HLSTHNT 180
Query: 127 ISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILI 23
+ D+SL +P +A + +W + + SDH+PI I
Sbjct: 181 FTHIDISLISPQIAHMCSWSISDNLHGSDHFPITI 215
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 60.5 bits (140), Expect = 1e-09
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Frame = -2
Query: 469 GVALLVHNTIP-FDHIPIANHSIDFS--IIAVSINKICFVSVYIPHPTSSIFDEIEVIIS 299
G A+L+ N++ F PIA + + +I ++ I F +VY P + DE + I+
Sbjct: 67 GAAILIKNSLAHFPLTPIATAKVQLAPAVIETALGPISFGAVYCPPRFAWTTDEFKDILE 126
Query: 298 QLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATRRTQPHEGISA 119
+ ++ GD+NA H WG+ S+ G + +++ ++ L TG TR G
Sbjct: 127 EFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCRGSPG 186
Query: 118 PDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 17
T G+ + + SDH P++ITL
Sbjct: 187 YIDFALTKGVLGIHANISAVVELSSDHLPLVITL 220
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 54.4 bits (125), Expect = 9e-08
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 22/187 (11%)
Frame = -2
Query: 517 VSQYLCVREDRTDGYAG-VALLVHNTIPFDHIP-IANHSID---FSIIAVSINKICFVSV 353
+ +Y R DR + G VA+ V NT+ + IP I +H I+ I S + + S+
Sbjct: 56 IPEYTIYRNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIYSI 115
Query: 352 YIPHPTS-----------------SIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSS 224
Y TS S++ + ISQ+ LI GDFN++H+AW T ++
Sbjct: 116 YFAGNTSKCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRAN 175
Query: 223 YYGARILDILDSNNFCILNTGVATRRTQPHEGISAPDLSLTTPGLASLLTWKTLSSTYDS 44
+G + ++ D F IL T H+ A L L + + L + S
Sbjct: 176 GWGKILNELSDLGKFSILYPTQPTYIPHNHKA-KASTLDLCLTNIPNQLANPAVMQELSS 234
Query: 43 DHYPILI 23
DH P++I
Sbjct: 235 DHLPVVI 241
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 54.4 bits (125), Expect = 9e-08
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 22/187 (11%)
Frame = -2
Query: 517 VSQYLCVREDRTDGYAG-VALLVHNTIPFDHIP-IANHSID---FSIIAVSINKICFVSV 353
+ +Y R DR + G VA+ V NT+ + IP I +H I+ I S + + S+
Sbjct: 4 IPEYTIYRNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIYSI 63
Query: 352 YIPHPTS-----------------SIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSS 224
Y TS S++ + ISQ+ LI GDFN++H+AW T ++
Sbjct: 64 YFAGNTSKCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRAN 123
Query: 223 YYGARILDILDSNNFCILNTGVATRRTQPHEGISAPDLSLTTPGLASLLTWKTLSSTYDS 44
+G + ++ D F IL T H+ A L L + + L + S
Sbjct: 124 GWGKILNELSDLGKFSILYPTQPTYIPHNHKA-KASTLDLCLTNIPNQLANPAVMQELSS 182
Query: 43 DHYPILI 23
DH P++I
Sbjct: 183 DHLPVVI 189
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 52.8 bits (121), Expect = 3e-07
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 4/155 (2%)
Frame = -2
Query: 469 GVALLVHNTIP-FDHIPIANHSIDFSIIAVS--INKICFVSVYIPHPTSSIFDEIEVIIS 299
GVA+ V T+ F I I S + V+ + + F ++Y T II
Sbjct: 68 GVAVFVRTTLRHFPQRVIETRHIQLSSVKVATGLGDLQFSAIYCSPSTRIEERHFTDIIR 127
Query: 298 QLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATRRTQ-PHEGIS 122
+ L+ GD+NA+H WG T +S G + + L IL TG TR P S
Sbjct: 128 ACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPSHTPS 187
Query: 121 APDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 17
D ++ G+ L T S DSDH P++I++
Sbjct: 188 CIDFAV-YHGIPDHLATITQSWDLDSDHLPLIISI 221
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 51.2 bits (117), Expect = 8e-07
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Frame = -2
Query: 391 IAVSINKICFVSVYIPHPTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGA 212
+ S+ + +VY+P I D+ + + + L + GD+NA+H WG+ S G
Sbjct: 97 LQTSVGTVTVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGK 156
Query: 211 RILDILDSNNFCILNTGVATRRT-QPHEGISAPDLSLTTPGLASLLTWKTLSSTYDSDHY 35
+ +++ + +L TG T + P SA D +T L +TL SDH
Sbjct: 157 MLQEVIAHGQYQVLATGEPTFYSYNPLLTPSALDFFITCGYGMGRLDVQTLQE-LSSDHL 215
Query: 34 PILITL 17
PIL L
Sbjct: 216 PILAVL 221
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -2
Query: 346 PHPTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-IL 170
PH + + + E + K +L GD+NA+H+ WG T + G + + + ++ I+
Sbjct: 12 PHHFTDVLNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 70
Query: 169 NTGVATRRTQPHE---GISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 17
TG AT PH+ SA D S+ GL L + S+ SDH PIL+ +
Sbjct: 71 ATGCATH--FPHDTRKNPSAIDFSI-CKGLGRLEKRISSSADLSSDHLPILLEI 121
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -2
Query: 346 PHPTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-IL 170
PH + + + E + K +L GD+NA+H+ WG T + G + + + ++ I+
Sbjct: 128 PHHFTDVLNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 186
Query: 169 NTGVATRRTQPHE---GISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 17
TG AT PH+ SA D S+ GL L + S+ SDH PIL+ +
Sbjct: 187 ATGCATH--FPHDTRKNPSAIDFSI-CKGLGRLEKRISSSADLSSDHLPILLEI 237
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -2
Query: 346 PHPTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-IL 170
PH + + + E + K +L GD+NA+H+ WG T + G + + + ++ I+
Sbjct: 90 PHHFTDVLNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 148
Query: 169 NTGVATRRTQPHE---GISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 17
TG AT PH+ SA D S+ GL L + S+ SDH PIL+ +
Sbjct: 149 ATGCATH--FPHDTRKNPSAIDFSI-CKGLGRLEKRISSSADLSSDHLPILLEI 199
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -2
Query: 346 PHPTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-IL 170
PH + + + E + K +L GD+NA+H+ WG T + G + + + ++ I+
Sbjct: 128 PHHFTDVLNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 186
Query: 169 NTGVATRRTQPHE---GISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 17
TG AT PH+ SA D S+ GL L + S+ SDH PIL+ +
Sbjct: 187 ATGCATH--FPHDTRKNPSAIDFSI-CKGLGRLEKRISSSADLSSDHLPILLEI 237
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 44.8 bits (101), Expect = 7e-05
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Frame = -2
Query: 352 YIPHPTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC- 176
++PH + + + E + K +L GD+NA+H+ WG T + G + + + +++
Sbjct: 126 WLPHHFTDVLNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADSTAE 184
Query: 175 ILNTGVATRRTQPHE---GISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 17
I+ TG AT PH+ SA D S+ GL + + SDH PIL+ +
Sbjct: 185 IIATGCATH--FPHDTRKNPSAIDFSI-CKGLGRFEKRISSGADLSSDHLPILLEI 237
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 44.8 bits (101), Expect = 7e-05
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Frame = -2
Query: 346 PHPTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-IL 170
PH + + + E + K +L GD+NA+H+ WG T + G + + + ++ I+
Sbjct: 128 PHHFTDVLNFAEKTLGGQTKFILC-GDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 186
Query: 169 NTGVATRRTQPHE---GISAPDLSLTTPGLASLLTWKTLSSTYD--SDHYPILITL 17
TG AT PH+ SA D S+ GL L K +SS D SDH PIL+ +
Sbjct: 187 ATGCATH--FPHDTRKNPSAIDFSI-CKGLGRL--EKRISSVADLSSDHLPILLEI 237
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = -2
Query: 391 IAVSINKICFVSVYIPHPTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGA 212
+ S+ + +VY+P I D+ + + + L + GD+NA+H WG+ S G
Sbjct: 97 LQTSVGTVTVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGK 156
Query: 211 RILDILDSNNFCILNTGVAT 152
+ +++ + +L TG T
Sbjct: 157 MLQEVIAHGQYQVLATGEPT 176
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 43.2 bits (97), Expect = 2e-04
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 8/172 (4%)
Frame = -2
Query: 508 YLCVREDRTDGYA--GVALLVHNTIPFDHIP-IANHSIDFSIIAVSINK--ICFVSVYIP 344
YL + DG A G +L+ N I H+ + + + IA+ +N +VY P
Sbjct: 51 YLFYGTNHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCP 110
Query: 343 HPTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDIL--DSNNFCIL 170
D+ + L + GD+NA+H WGS S G ++ + L N +
Sbjct: 111 PRFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGKQLYNALTKPENKLDYV 170
Query: 169 NTGVATR-RTQPHEGISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 17
+ G T P + D ++T +++T + L+ SDH P+ + +
Sbjct: 171 SPGKPTYWPADPRKIPDLIDFAITKHVPRNMVTAEALAD-LSSDHSPVFLNM 221
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 42.7 bits (96), Expect = 3e-04
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -2
Query: 346 PHPTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFC-IL 170
PH + + + E + K +++ GD+NA+H+ WG + GA + D + +++ I+
Sbjct: 140 PHHFTDVLNFAEKTMGGQTK-LILCGDWNAKHRQWGCIRACQRGAALYDAIQADSMAEIV 198
Query: 169 NTGVATRRTQPHEGISAP---DLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 17
TG AT PH+ +P D S+ L + S+ SDH PIL+ +
Sbjct: 199 ATGSATH--FPHDTRKSPSAIDFSI-CKRLGRYEKRISSSAHLSSDHLPILLEI 249
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 41.9 bits (94), Expect = 5e-04
Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 8/172 (4%)
Frame = -2
Query: 508 YLCVREDRTDGYA--GVALLVHNTIPFDHIP-IANHSIDFSIIAVSINK--ICFVSVYIP 344
YL + DG A G +L+ N I H+ + + + IA+ +N +VY P
Sbjct: 51 YLFYGTNHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCP 110
Query: 343 HPTSSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDIL--DSNNFCIL 170
D+ + L + GD+NA+H WGS + G ++ + L N +
Sbjct: 111 PRFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYV 170
Query: 169 NTGVATR-RTQPHEGISAPDLSLTTPGLASLLTWKTLSSTYDSDHYPILITL 17
+ G T P + D ++T +++T + L+ SDH P+ + +
Sbjct: 171 SPGKPTYWPADPRKIPDLIDFAITKHVPRNMVTAEALAD-LSSDHSPVFLNM 221
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 39.5 bits (88), Expect = 0.003
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 4/123 (3%)
Frame = -2
Query: 394 IIAVSINKICFVSVYIPHPTS--SIFDEIEVIISQLP--KPVLILGDFNAQHQAWGSTNS 227
I I I F S Y P S D +E +++ +P +I GD NA WGS S
Sbjct: 79 IAYAKIRGIHFYSCYAPPSDSPEQFEDMLEKLVNHASGRRPTVIGGDLNAWATEWGSRIS 138
Query: 226 SYYGARILDILDSNNFCILNTGVATRRTQPHEGISAPDLSLTTPGLASLLTWKTLSSTYD 47
+ G ++D ++ + +LN G G S D++ + L + W
Sbjct: 139 NTRGRAVIDAMNLLDLVLLNDGFKPTFNN-DRGTSFIDVTFVSRVLVAGSNWMVHEDITL 197
Query: 46 SDH 38
SDH
Sbjct: 198 SDH 200
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.9 bits (74), Expect = 0.13
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = -2
Query: 334 SSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARI-LDILDSNNFCILNTGV 158
S +F+ E+++ K +L GD+N +H+ WG+ S G + IL + I+ TG
Sbjct: 136 SKLFNHFEMLLDGKSKFILG-GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGH 194
Query: 157 ATR-RTQPHEGISAPDLSLTTP-GLASLLTWKTLSSTYDSDHYPILITL 17
AT + SA D ++ L T+ T SDH PI I L
Sbjct: 195 ATHFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQIVL 241
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.9 bits (74), Expect = 0.13
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = -2
Query: 334 SSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARI-LDILDSNNFCILNTGV 158
S +F+ E+++ K +L GD+N +H+ WG+ S G + IL + I+ TG
Sbjct: 136 SKLFNHFEMLLDGKSKFILG-GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGH 194
Query: 157 ATR-RTQPHEGISAPDLSLTTP-GLASLLTWKTLSSTYDSDHYPILITL 17
AT + SA D ++ L T+ T SDH PI I L
Sbjct: 195 ATHFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQIVL 241
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.9 bits (74), Expect = 0.13
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = -2
Query: 334 SSIFDEIEVIISQLPKPVLILGDFNAQHQAWGSTNSSYYGARI-LDILDSNNFCILNTGV 158
S +F+ E+++ K +L GD+N +H+ WG+ S G + IL + I+ TG
Sbjct: 136 SKLFNHFEMLLDGKSKFILG-GDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGH 194
Query: 157 ATR-RTQPHEGISAPDLSLTTP-GLASLLTWKTLSSTYDSDHYPILITL 17
AT + SA D ++ L T+ T SDH PI I L
Sbjct: 195 ATHFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQIVL 241
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 32.7 bits (71), Expect = 0.31
Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 6/159 (3%)
Frame = -2
Query: 475 YAGVALLVHNTIPFD-HIPIANHSIDFSIIAVSINK---ICFVSVYIPHPTSSIFDEIEV 308
+ G A+L+ N + + A + + + I + ++ + +VY P + + +
Sbjct: 64 HGGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPPRFTVLEAQFLD 123
Query: 307 IISQLPKPVLILGDFNAQHQAWGSTNSSYYGARILDILDSNNFCILNTGVATRRTQPHEG 128
L + GD+NA+H WGS + G ++ + + + + P +
Sbjct: 124 FFQALGPHFIAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDL 183
Query: 127 ISAPDL--SLTTPGLASLLTWKTLSSTYDSDHYPILITL 17
PDL T ++ L SDH P+LI L
Sbjct: 184 NKLPDLIDFAVTKNISRSLVKAECLPDLSSDHSPVLIHL 222
>AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone
receptor 4 protein.
Length = 1518
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 301 SQLPKPVLILGDFNAQHQAWGSTNSSYYG 215
SQLP L + +AQ Q WGS+NS+ G
Sbjct: 866 SQLPPGQLQALNLSAQQQQWGSSNSTGLG 894
>AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2
protein.
Length = 1464
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 301 SQLPKPVLILGDFNAQHQAWGSTNSSYYG 215
SQLP L + +AQ Q WGS+NS+ G
Sbjct: 811 SQLPPGQLQALNLSAQQQQWGSSNSTGLG 839
>AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC
protein.
Length = 1518
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 301 SQLPKPVLILGDFNAQHQAWGSTNSSYYG 215
SQLP L + +AQ Q WGS+NS+ G
Sbjct: 866 SQLPPGQLQALNLSAQQQQWGSSNSTGLG 894
>DQ026292-2|AAY89653.1| 536|Drosophila melanogaster cytochrome P450
CYP12A4 protein.
Length = 536
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +3
Query: 42 SLSYVEESVFQVSKEAKPGVV 104
+L+YV+E++ ++ KEAK GVV
Sbjct: 283 TLAYVDEAIERLDKEAKEGVV 303
>AY070663-1|AAL48134.1| 536|Drosophila melanogaster RH04586p
protein.
Length = 536
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +3
Query: 42 SLSYVEESVFQVSKEAKPGVV 104
+L+YV+E++ ++ KEAK GVV
Sbjct: 283 TLAYVDEAIERLDKEAKEGVV 303
>AJ890254-1|CAI64834.1| 417|Drosophila melanogaster cytochrome P450
protein.
Length = 417
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +3
Query: 42 SLSYVEESVFQVSKEAKPGVV 104
+L+YV+E++ ++ KEAK GVV
Sbjct: 164 TLAYVDEAIERLDKEAKEGVV 184
>AJ748833-1|CAG38967.1| 536|Drosophila melanogaster cytochrome P450
protein.
Length = 536
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +3
Query: 42 SLSYVEESVFQVSKEAKPGVV 104
+L+YV+E++ ++ KEAK GVV
Sbjct: 283 TLAYVDEAIERLGKEAKEGVV 303
>AE014297-2626|AAF55636.2| 536|Drosophila melanogaster CG6042-PA
protein.
Length = 536
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +3
Query: 42 SLSYVEESVFQVSKEAKPGVV 104
+L+YV+E++ ++ KEAK GVV
Sbjct: 283 TLAYVDEAIERLDKEAKEGVV 303
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,455,362
Number of Sequences: 53049
Number of extensions: 518995
Number of successful extensions: 1235
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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