Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313A08f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592... 194 3e-50
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 159 2e-39
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 61 5e-10
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003... 60 1e-09
06_01_0646 + 4678422-4678508,4679042-4679123,4679236-4679327,467... 58 6e-09
02_05_0986 - 33334205-33334362,33334487-33334662,33334774-333349... 58 6e-09
07_03_1770 - 29382508-29382591,29382901-29383041,29383134-293835... 39 0.002
03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 39 0.002
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 36 0.026
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 33 0.18
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 32 0.24
12_02_1080 - 25911521-25911922 30 1.3
04_02_0046 - 9181351-9181791,9182143-9182439 30 1.3
09_02_0524 - 10207711-10208154,10208237-10208338,10208439-102085... 28 5.2
07_01_0817 + 6533316-6533849,6533996-6534064,6534528-6534767,653... 28 5.2
02_04_0160 - 20427774-20428217,20428301-20428402,20428503-204285... 28 5.2
02_01_0642 - 4803464-4805665,4806231-4806320 27 9.1
>02_01_0789 -
5919271-5919411,5920105-5920215,5920303-5920401,
5920486-5920642,5920774-5920937,5921017-5921079,
5921153-5921377,5922038-5922135,5923283-5923499
Length = 424
Score = 194 bits (474), Expect = 3e-50
Identities = 91/139 (65%), Positives = 111/139 (79%)
Frame = +2
Query: 104 GEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEV 283
GEG R YY+ I +LQL + +K+ NL RL+AQRN+LN++VRMLR GSYVGEV
Sbjct: 34 GEGLRQYYLQHIHDLQLQIRQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEV 93
Query: 284 VKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVS 463
VK M K KVLVKVHPEGK+VVD+DK++DI +T + RVALRN+SY LH ILP+KVDPLV+
Sbjct: 94 VKVMGKSKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVN 153
Query: 464 LMMVEKVPDSTYEMVGGLD 520
LM VEKVPDSTY+M+GGLD
Sbjct: 154 LMKVEKVPDSTYDMIGGLD 172
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 159 bits (385), Expect = 2e-39
Identities = 86/163 (52%), Positives = 109/163 (66%), Gaps = 23/163 (14%)
Frame = +2
Query: 101 KGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGE 280
+G+G RPYY ++I +LQL + + + NL RL+AQRN LN++V L GSYVGE
Sbjct: 32 RGDGLRPYYQSRIHDLQLQIRQGTDNLSRLEAQRNVLNSQVITLGEELKVLHEPGSYVGE 91
Query: 281 VVKPMDKKKVLVK-----------------------VHPEGKFVVDLDKNVDINDVTANC 391
VVK M K KVLVK VHPEGK+VVD+DK++DI ++ +
Sbjct: 92 VVKVMGKSKVLVKCCVLVFVHMSVALEIIGEDNILLVHPEGKYVVDVDKSIDITKLSPST 151
Query: 392 RVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLD 520
RVALRN+SY LH ILP+KVDPLV+LM VEKVPDSTY+M+GGLD
Sbjct: 152 RVALRNDSYMLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLD 194
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 61.3 bits (142), Expect = 5e-10
Identities = 30/85 (35%), Positives = 49/85 (57%)
Frame = +2
Query: 263 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPN 442
G +GEV++P+D ++ +VK ++VV VD +T+ RV L + T+ + LP
Sbjct: 61 GQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPR 120
Query: 443 KVDPLVSLMMVEKVPDSTYEMVGGL 517
+VDP+V M+ E + +Y VGGL
Sbjct: 121 EVDPVVYNMLHEDPGNVSYSAVGGL 145
>06_03_0711 +
23798998-23799106,23799838-23799957,23800181-23800317,
23800418-23800579,23800707-23800793,23800872-23800958,
23801317-23801454,23802023-23802214,23802287-23802385,
23802490-23802564
Length = 401
Score = 60.1 bits (139), Expect = 1e-09
Identities = 30/85 (35%), Positives = 48/85 (56%)
Frame = +2
Query: 263 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPN 442
G +GEV++P+D ++ +VK ++VV VD + A RV L + T+ + LP
Sbjct: 62 GQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDKEKLIAGTRVVLDMTTLTIMRTLPR 121
Query: 443 KVDPLVSLMMVEKVPDSTYEMVGGL 517
+VDP+V M+ E + +Y VGGL
Sbjct: 122 EVDPVVYNMLHEDPGNVSYSAVGGL 146
>06_01_0646 +
4678422-4678508,4679042-4679123,4679236-4679327,
4679441-4679518,4679635-4679696,4680272-4680993,
4681115-4681272
Length = 426
Score = 57.6 bits (133), Expect = 6e-09
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 278 EVVKP-MDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDP 454
+++ P D K ++ V KFVV L V D+ RV + Y + LP K+DP
Sbjct: 93 KIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152
Query: 455 LVSLMMVEKVPDSTYEMVGG 514
V++M VE+ PD TY VGG
Sbjct: 153 SVTMMTVEEKPDVTYNDVGG 172
>02_05_0986 -
33334205-33334362,33334487-33334662,33334774-33334955,
33335064-33335282,33335407-33335551,33336127-33336188,
33336282-33336359,33336517-33336608,33337086-33337167,
33337519-33337605
Length = 426
Score = 57.6 bits (133), Expect = 6e-09
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 278 EVVKP-MDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDP 454
+++ P D K ++ V KFVV L V D+ RV + Y + LP K+DP
Sbjct: 93 KIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152
Query: 455 LVSLMMVEKVPDSTYEMVGG 514
V++M VE+ PD TY VGG
Sbjct: 153 SVTMMTVEEKPDVTYNDVGG 172
>07_03_1770 -
29382508-29382591,29382901-29383041,29383134-29383520,
29383685-29383930,29385396-29385437,29385973-29386461
Length = 462
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 431 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLD 520
IL ++VDP+VS+M VEK P +Y +GGLD
Sbjct: 184 ILQDEVDPMVSVMKVEKAPLESYADIGGLD 213
>03_02_0691 +
10432615-10433109,10433155-10433216,10433526-10433565,
10434562-10434807,10435020-10435189,10435323-10435539,
10435615-10435755,10435943-10436026
Length = 484
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 431 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLD 520
IL ++VDP+VS+M VEK P +Y +GGLD
Sbjct: 206 ILQDEVDPMVSVMKVEKAPLESYADIGGLD 235
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 35.5 bits (78), Expect = 0.026
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = +2
Query: 272 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 451
+G+ ++ +D +V + V + ++ + + VAL S L +LP + D
Sbjct: 39 IGQFMEMVDGNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEAD 98
Query: 452 PLVSLMMVEKVPDSTYEMVGGLD 520
+SL+ + P+ TY +GG D
Sbjct: 99 SSISLLGSSEKPNVTYTDIGGCD 121
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 32.7 bits (71), Expect = 0.18
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 362 VDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLD 520
VD + + V + +SY + LP++ D V M V++ P Y +GGL+
Sbjct: 116 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 168
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 32.3 bits (70), Expect = 0.24
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 395 VALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLD 520
V + +SY + LP++ D V M V++ P Y +GGL+
Sbjct: 130 VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 171
>12_02_1080 - 25911521-25911922
Length = 133
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 137 SWLCSTGGSPRPSPYPLPF 81
+W+CS G SPRP P+P+
Sbjct: 18 TWICSGGESPRPLLIPVPY 36
>04_02_0046 - 9181351-9181791,9182143-9182439
Length = 245
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = +2
Query: 284 VKPMDKKKVL---VKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYT----LHKILPN 442
+KP DK + VK+ GK + D+ D +++ + LR++S LH I P+
Sbjct: 48 IKPGDKVLMFNSRVKLFGHGKLHSKWEGPFDVIDTSSHGAITLRDDSGNIFKPLHSIAPS 107
Query: 443 KVDPLVSLMMVEKVPDSTYEMVG 511
+ PL+ ++ V S +G
Sbjct: 108 TLKPLIQALVPFMVGKSLMPYIG 130
>09_02_0524 -
10207711-10208154,10208237-10208338,10208439-10208531,
10208612-10208683,10208730-10208798,10208928-10209175,
10209256-10209370
Length = 380
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 137 IEELQLIVAEKSQNLRRLQAQRNELNAKVR 226
+EE+Q + E Q LQ+QR ELN++ R
Sbjct: 309 LEEVQKLTVENLQLKGELQSQREELNSQKR 338
>07_01_0817 +
6533316-6533849,6533996-6534064,6534528-6534767,
6537747-6537965,6538041-6538133,6538231-6538332,
6538415-6538858
Length = 566
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 137 IEELQLIVAEKSQNLRRLQAQRNELNAKVR 226
+EE+Q + E Q LQ+QR ELN++ R
Sbjct: 495 LEEVQKLTVENLQLKGELQSQREELNSQKR 524
>02_04_0160 -
20427774-20428217,20428301-20428402,20428503-20428595,
20428675-20428860,20428966-20429213,20429292-20429412,
20430674-20430718,20431086-20431138,20431152-20431173
Length = 437
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 137 IEELQLIVAEKSQNLRRLQAQRNELNAKVR 226
+EE+Q + E Q LQ+QR ELN++ R
Sbjct: 366 LEEVQKLTVENLQLKGELQSQREELNSQKR 395
>02_01_0642 - 4803464-4805665,4806231-4806320
Length = 763
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 131 TKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+K+E +Q+ V EK L Q + E+N++V L+
Sbjct: 474 SKVESIQIAVQEKDSELSETQRRLAEVNSEVVELK 508
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,679,006
Number of Sequences: 37544
Number of extensions: 241104
Number of successful extensions: 715
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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