BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313A08f
(521 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 25 1.2
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 23 6.2
AY645021-1|AAT92557.1| 163|Anopheles gambiae even-skipped protein. 23 8.2
AJ973471-1|CAJ01518.1| 122|Anopheles gambiae hypothetical prote... 23 8.2
AJ697731-1|CAG26924.1| 122|Anopheles gambiae putative chemosens... 23 8.2
AJ697730-1|CAG26923.1| 122|Anopheles gambiae putative chemosens... 23 8.2
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 8.2
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 25.4 bits (53), Expect = 1.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 360 TLILTMSRPIVVSLFATKAILYTKYYPTKSILLCRS*W 473
TL + S IV ++ + ++L+ YP K +LC + W
Sbjct: 195 TLCVAASIWIVGTIISCPSLLFFTTYPMKDHILCYAEW 232
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.0 bits (47), Expect = 6.2
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 371 NDVTANCRVALRNESYTLHKILPNKVDPL-VSLMMVEKVPDSTYEMVGG 514
N ANC L N L +LPN + L SL+ +E + V G
Sbjct: 936 NSDLANCFSDLINPGSDLTSLLPNSFEALDQSLLTMETTTTIIRDRVSG 984
>AY645021-1|AAT92557.1| 163|Anopheles gambiae even-skipped protein.
Length = 163
Score = 22.6 bits (46), Expect = 8.2
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 116 GSPRPSPYPLP 84
G PR +PYPLP
Sbjct: 1 GYPRYTPYPLP 11
>AJ973471-1|CAJ01518.1| 122|Anopheles gambiae hypothetical protein
protein.
Length = 122
Score = 22.6 bits (46), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 287 KPMDKKKVLVKVHPEGKFVVDLDK 358
KP + KK+L K PEG + +K
Sbjct: 94 KPQEWKKLLDKYDPEGIYKSKFEK 117
>AJ697731-1|CAG26924.1| 122|Anopheles gambiae putative chemosensory
protein CSP2 protein.
Length = 122
Score = 22.6 bits (46), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 287 KPMDKKKVLVKVHPEGKFVVDLDK 358
KP + KK+L K PEG + +K
Sbjct: 94 KPQEWKKLLDKYDPEGIYKSKFEK 117
>AJ697730-1|CAG26923.1| 122|Anopheles gambiae putative chemosensory
protein CSP1 protein.
Length = 122
Score = 22.6 bits (46), Expect = 8.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 287 KPMDKKKVLVKVHPEGKFVVDLDK 358
KP + KK+L K PEG + +K
Sbjct: 94 KPQEWKKLLDKYDPEGIYKSKFEK 117
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 22.6 bits (46), Expect = 8.2
Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -2
Query: 319 FYEDLLFIHRFNHFSDVRSLFLQELQLLAQH--TNFSVEFITLGLKTTK 179
F + H+FN + D + ++ ++ + QH ++ +F T +K K
Sbjct: 1299 FASETYHYHQFNLYYDAQRTSVKNVKFVLQHKQADYDQDFQTADVKHPK 1347
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,603
Number of Sequences: 2352
Number of extensions: 9079
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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