Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313A08f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interact... 243 3e-64
D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p4... 243 3e-64
BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome, ma... 243 3e-64
BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome, ma... 243 3e-64
AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase s... 243 3e-64
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 62 1e-09
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 62 1e-09
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 62 1e-09
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 62 1e-09
D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42 pr... 59 1e-08
CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein. 59 1e-08
BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome, ma... 59 1e-08
BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome, ma... 59 1e-08
AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens ... 59 1e-08
AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulato... 59 1e-08
BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome, ma... 52 1e-06
L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulat... 51 3e-06
CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein. 51 3e-06
BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome, ma... 51 3e-06
BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome, ma... 51 3e-06
BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome, ma... 51 3e-06
BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome, ma... 51 3e-06
AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase s... 51 3e-06
U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein. 42 0.002
BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome, ma... 42 0.002
BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome, ma... 42 0.002
BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome, ma... 42 0.002
BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome, ma... 42 0.002
AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo sa... 42 0.002
AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein. 40 0.005
BC011933-1|AAH11933.1| 259|Homo sapiens chromosome 6 open readi... 39 0.012
BC006293-1|AAH06293.2| 259|Homo sapiens C6orf153 protein protein. 39 0.012
AL136304-5|CAI19798.1| 259|Homo sapiens protein ( Human DNA seq... 39 0.012
M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human immunodef... 35 0.15
CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein. 35 0.15
BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein. 35 0.15
BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome, ma... 35 0.15
BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome, ma... 35 0.15
BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome, ma... 35 0.15
AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase s... 35 0.15
Y19209-1|CAB76829.1| 600|Homo sapiens type II hair keratin 3 pr... 31 1.9
X07695-1|CAA30534.1| 408|Homo sapiens cytokeratin 4 (408 AA) pr... 31 1.9
BC069647-1|AAH69647.1| 600|Homo sapiens keratin 84 protein. 31 1.9
BC042174-1|AAH42174.1| 534|Homo sapiens KRT4 protein protein. 31 1.9
BC003630-1|AAH03630.2| 324|Homo sapiens KRT4 protein protein. 31 1.9
AY043326-1|AAL14196.1| 534|Homo sapiens keratin 4 protein. 31 1.9
AJ628420-1|CAF31524.1| 598|Homo sapiens type II hair keratin 4 ... 31 1.9
BC113686-1|AAI13687.1| 511|Homo sapiens keratin 72 protein. 31 3.2
AY033496-1|AAK55109.1| 511|Homo sapiens keratin protein K6irs p... 31 3.2
AY033495-1|AAK55108.1| 510|Homo sapiens keratin protein K6irs p... 31 3.2
AK093060-1|BAC04039.1| 398|Homo sapiens protein ( Homo sapiens ... 31 3.2
Y19212-1|CAB76832.1| 551|Homo sapiens cytokeratin protein. 30 4.3
Y17282-1|CAA76730.1| 551|Homo sapiens cytokeratin type II protein. 30 4.3
AJ508777-1|CAD48514.1| 529|Homo sapiens keratin 6 irs4 protein. 30 4.3
Y19210-1|CAB76830.1| 507|Homo sapiens type II hair keratin 5 pr... 30 5.7
Y19208-1|CAB76828.1| 493|Homo sapiens type II hair keratin 3 pr... 30 5.7
Y13621-1|CAA73943.1| 505|Homo sapiens keratin protein. 30 5.7
X99142-1|CAA67579.1| 483|Homo sapiens type II intermediate fila... 30 5.7
X99141-1|CAA67578.1| 493|Homo sapiens type II intermediate fila... 30 5.7
X99140-1|CAA67577.1| 507|Homo sapiens type II intermediate fila... 30 5.7
X81420-1|CAA57180.1| 425|Homo sapiens hair type II basic kerati... 30 5.7
X80197-1|CAA56488.1| 257|Homo sapiens keratin like protein. 30 5.7
BC128063-1|AAI28064.1| 493|Homo sapiens keratin 83 protein. 30 5.7
BC126935-1|AAI26936.1| 447|Homo sapiens KRT83 protein protein. 30 5.7
BC117467-1|AAI17468.1| 505|Homo sapiens keratin, hair, basic, 1... 30 5.7
BC117465-1|AAI17466.1| 505|Homo sapiens keratin, hair, basic, 1... 30 5.7
BC069585-1|AAH69585.1| 486|Homo sapiens keratin 86 protein. 30 5.7
BC069546-1|AAH69546.1| 493|Homo sapiens keratin 83 protein. 30 5.7
BC006452-1|AAH06452.1| 244|Homo sapiens KRT81 protein protein. 30 5.7
AJ000263-1|CAA03979.1| 486|Homo sapiens keratin protein Hb6 pro... 30 5.7
L42612-1|AAC41771.1| 564|Homo sapiens keratin type II protein. 29 7.5
BC034535-1|AAH34535.1| 564|Homo sapiens keratin 6B protein. 29 7.5
V01516-1|CAA24760.1| 357|Homo sapiens protein ( Human messenger... 29 9.9
L42611-1|AAC41770.1| 564|Homo sapiens keratin type II protein. 29 9.9
L42610-1|AAB60696.1| 384|Homo sapiens keratin type II protein. 29 9.9
L42601-1|AAC41769.1| 564|Homo sapiens keratin type II protein. 29 9.9
L42592-1|AAC41768.1| 564|Homo sapiens keratin type II protein. 29 9.9
L42583-1|AAC41767.1| 564|Homo sapiens keratin type II protein. 29 9.9
L00205-1|AAA59466.1| 563|Homo sapiens KRTL1 protein. 29 9.9
BT006899-1|AAP35545.1| 564|Homo sapiens keratin 6A protein. 29 9.9
BC139753-1|AAI39754.1| 564|Homo sapiens keratin 6A protein. 29 9.9
BC130585-1|AAI30586.1| 564|Homo sapiens keratin 6C protein. 29 9.9
BC130583-1|AAI30584.1| 564|Homo sapiens keratin 6C protein. 29 9.9
BC125058-1|AAI25059.1| 564|Homo sapiens keratin 6A protein. 29 9.9
BC110639-1|AAI10640.1| 564|Homo sapiens keratin 6C protein. 29 9.9
BC069269-1|AAH69269.1| 564|Homo sapiens keratin 6A protein. 29 9.9
BC014152-1|AAH14152.1| 564|Homo sapiens keratin 6A protein. 29 9.9
BC008807-1|AAH08807.1| 564|Homo sapiens keratin 6A protein. 29 9.9
>L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interactor
protein.
Length = 406
Score = 243 bits (594), Expect = 3e-64
Identities = 118/148 (79%), Positives = 130/148 (87%), Gaps = 1/148 (0%)
Frame = +2
Query: 80 KMEVDTVK-GEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXX 256
+ME++ K G G R YY++KIEELQLIV +KSQNLRRLQAQRNELNAKVR+LR
Sbjct: 8 QMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 257 XXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKIL 436
GSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKN+DINDVT NCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 437 PNKVDPLVSLMMVEKVPDSTYEMVGGLD 520
PNKVDPLVSLMMVEKVPDSTYEM+GGLD
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLD 155
>D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p45
protein.
Length = 406
Score = 243 bits (594), Expect = 3e-64
Identities = 118/148 (79%), Positives = 130/148 (87%), Gaps = 1/148 (0%)
Frame = +2
Query: 80 KMEVDTVK-GEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXX 256
+ME++ K G G R YY++KIEELQLIV +KSQNLRRLQAQRNELNAKVR+LR
Sbjct: 8 QMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLRRELQLLQ 67
Query: 257 XXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKIL 436
GSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKN+DINDVT NCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 437 PNKVDPLVSLMMVEKVPDSTYEMVGGLD 520
PNKVDPLVSLMMVEKVPDSTYEM+GGLD
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLD 155
>BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 243 bits (594), Expect = 3e-64
Identities = 118/148 (79%), Positives = 130/148 (87%), Gaps = 1/148 (0%)
Frame = +2
Query: 80 KMEVDTVK-GEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXX 256
+ME++ K G G R YY++KIEELQLIV +KSQNLRRLQAQRNELNAKVR+LR
Sbjct: 8 QMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 257 XXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKIL 436
GSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKN+DINDVT NCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 437 PNKVDPLVSLMMVEKVPDSTYEMVGGLD 520
PNKVDPLVSLMMVEKVPDSTYEM+GGLD
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLD 155
>BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 243 bits (594), Expect = 3e-64
Identities = 118/148 (79%), Positives = 130/148 (87%), Gaps = 1/148 (0%)
Frame = +2
Query: 80 KMEVDTVK-GEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXX 256
+ME++ K G G R YY++KIEELQLIV +KSQNLRRLQAQRNELNAKVR+LR
Sbjct: 8 QMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 67
Query: 257 XXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKIL 436
GSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKN+DINDVT NCRVALRN+SYTLHKIL
Sbjct: 68 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 127
Query: 437 PNKVDPLVSLMMVEKVPDSTYEMVGGLD 520
PNKVDPLVSLMMVEKVPDSTYEM+GGLD
Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEMIGGLD 155
>AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase
subunit 5 variant protein.
Length = 345
Score = 243 bits (594), Expect = 3e-64
Identities = 118/148 (79%), Positives = 130/148 (87%), Gaps = 1/148 (0%)
Frame = +2
Query: 80 KMEVDTVK-GEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXX 256
+ME++ K G G R YY++KIEELQLIV +KSQNLRRLQAQRNELNAKVR+LR
Sbjct: 4 EMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQ 63
Query: 257 XXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKIL 436
GSYVGEVV+ MDKKKVLVKVHPEGKFVVD+DKN+DINDVT NCRVALRN+SYTLHKIL
Sbjct: 64 EQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKIL 123
Query: 437 PNKVDPLVSLMMVEKVPDSTYEMVGGLD 520
PNKVDPLVSLMMVEKVPDSTYEM+GGLD
Sbjct: 124 PNKVDPLVSLMMVEKVPDSTYEMIGGLD 151
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 62.1 bits (144), Expect = 1e-09
Identities = 30/70 (42%), Positives = 39/70 (55%)
Frame = +2
Query: 305 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 484
K ++ V KFVVDL V D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 485 PDSTYEMVGG 514
PD TY VGG
Sbjct: 170 PDVTYSDVGG 179
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 62.1 bits (144), Expect = 1e-09
Identities = 30/70 (42%), Positives = 39/70 (55%)
Frame = +2
Query: 305 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 484
K ++ V KFVVDL V D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 485 PDSTYEMVGG 514
PD TY VGG
Sbjct: 170 PDVTYSDVGG 179
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 62.1 bits (144), Expect = 1e-09
Identities = 30/70 (42%), Positives = 39/70 (55%)
Frame = +2
Query: 305 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 484
K ++ V KFVVDL V D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 86 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 145
Query: 485 PDSTYEMVGG 514
PD TY VGG
Sbjct: 146 PDVTYSDVGG 155
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 62.1 bits (144), Expect = 1e-09
Identities = 30/70 (42%), Positives = 39/70 (55%)
Frame = +2
Query: 305 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 484
K ++ V KFVVDL V D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 485 PDSTYEMVGG 514
PD TY VGG
Sbjct: 170 PDVTYSDVGG 179
>D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42
protein.
Length = 389
Score = 58.8 bits (136), Expect = 1e-08
Identities = 35/113 (30%), Positives = 56/113 (49%)
Frame = +2
Query: 179 LRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDK 358
L+ L+ Q EL + G VGEV+K + ++K +VK ++VV +
Sbjct: 26 LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRR 85
Query: 359 NVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGL 517
+D + + RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 86 QLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGL 138
>CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein.
Length = 389
Score = 58.8 bits (136), Expect = 1e-08
Identities = 35/113 (30%), Positives = 56/113 (49%)
Frame = +2
Query: 179 LRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDK 358
L+ L+ Q EL + G VGEV+K + ++K +VK ++VV +
Sbjct: 26 LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRR 85
Query: 359 NVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGL 517
+D + + RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 86 QLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGL 138
>BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 58.8 bits (136), Expect = 1e-08
Identities = 35/113 (30%), Positives = 56/113 (49%)
Frame = +2
Query: 179 LRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDK 358
L+ L+ Q EL + G VGEV+K + ++K +VK ++VV +
Sbjct: 26 LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRR 85
Query: 359 NVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGL 517
+D + + RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 86 QLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGL 138
>BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 58.8 bits (136), Expect = 1e-08
Identities = 35/113 (30%), Positives = 56/113 (49%)
Frame = +2
Query: 179 LRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDK 358
L+ L+ Q EL + G VGEV+K + ++K +VK ++VV +
Sbjct: 26 LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRR 85
Query: 359 NVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGL 517
+D + + RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 86 QLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGL 138
>AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens
clone 23598 mRNA, complete cds. ).
Length = 280
Score = 58.8 bits (136), Expect = 1e-08
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 440 NKVDPLVSLMMVEKVPDSTYEMVGGLD 520
NKVDPLVSLMMVEKVPDSTYEM+GGLD
Sbjct: 3 NKVDPLVSLMMVEKVPDSTYEMIGGLD 29
>AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulatory
subunit protein.
Length = 389
Score = 58.8 bits (136), Expect = 1e-08
Identities = 35/113 (30%), Positives = 56/113 (49%)
Frame = +2
Query: 179 LRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDK 358
L+ L+ Q EL + G VGEV+K + ++K +VK ++VV +
Sbjct: 26 LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRR 85
Query: 359 NVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGL 517
+D + + RVAL + T+ + LP +VDPLV M E + +Y +GGL
Sbjct: 86 QLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGL 138
>BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 52.0 bits (119), Expect = 1e-06
Identities = 34/131 (25%), Positives = 60/131 (45%)
Frame = +2
Query: 128 ITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKK 307
+ K+E ++ + + + +R Q Q L K R VG + + +D +
Sbjct: 62 LLKLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNR 120
Query: 308 VLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 487
+V + V + VD + + C V L ++ + + +L + DPLV++M VEK P
Sbjct: 121 AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
Query: 488 DSTYEMVGGLD 520
TY +GGLD
Sbjct: 181 QETYADIGGLD 191
>L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulatory
subunit protein.
Length = 440
Score = 50.8 bits (116), Expect = 3e-06
Identities = 34/131 (25%), Positives = 59/131 (45%)
Frame = +2
Query: 128 ITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKK 307
+ K+E ++ + + + +R Q Q L K R VG + + +D
Sbjct: 62 LLKLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH 120
Query: 308 VLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 487
+V + V + VD + + C V L ++ + + +L + DPLV++M VEK P
Sbjct: 121 AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
Query: 488 DSTYEMVGGLD 520
TY +GGLD
Sbjct: 181 QETYADIGGLD 191
>CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein.
Length = 440
Score = 50.8 bits (116), Expect = 3e-06
Identities = 34/131 (25%), Positives = 59/131 (45%)
Frame = +2
Query: 128 ITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKK 307
+ K+E ++ + + + +R Q Q L K R VG + + +D
Sbjct: 62 LLKLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH 120
Query: 308 VLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 487
+V + V + VD + + C V L ++ + + +L + DPLV++M VEK P
Sbjct: 121 AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
Query: 488 DSTYEMVGGLD 520
TY +GGLD
Sbjct: 181 QETYADIGGLD 191
>BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 50.8 bits (116), Expect = 3e-06
Identities = 34/131 (25%), Positives = 59/131 (45%)
Frame = +2
Query: 128 ITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKK 307
+ K+E ++ + + + +R Q Q L K R VG + + +D
Sbjct: 62 LLKLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH 120
Query: 308 VLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 487
+V + V + VD + + C V L ++ + + +L + DPLV++M VEK P
Sbjct: 121 AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
Query: 488 DSTYEMVGGLD 520
TY +GGLD
Sbjct: 181 QETYADIGGLD 191
>BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 50.8 bits (116), Expect = 3e-06
Identities = 34/131 (25%), Positives = 59/131 (45%)
Frame = +2
Query: 128 ITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKK 307
+ K+E ++ + + + +R Q Q L K R VG + + +D
Sbjct: 62 LLKLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH 120
Query: 308 VLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 487
+V + V + VD + + C V L ++ + + +L + DPLV++M VEK P
Sbjct: 121 AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
Query: 488 DSTYEMVGGLD 520
TY +GGLD
Sbjct: 181 QETYADIGGLD 191
>BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 50.8 bits (116), Expect = 3e-06
Identities = 34/131 (25%), Positives = 59/131 (45%)
Frame = +2
Query: 128 ITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKK 307
+ K+E ++ + + + +R Q Q L K R VG + + +D
Sbjct: 62 LLKLERIKGYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH 120
Query: 308 VLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 487
+V + V + VD + + C V L ++ + + +L + DPLV++M VEK P
Sbjct: 121 AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
Query: 488 DSTYEMVGGLD 520
TY +GGLD
Sbjct: 181 QETYADIGGLD 191
>BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 50.8 bits (116), Expect = 3e-06
Identities = 34/131 (25%), Positives = 59/131 (45%)
Frame = +2
Query: 128 ITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKK 307
+ K+E ++ + + + +R Q Q L K R VG + + +D
Sbjct: 62 LLKLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH 120
Query: 308 VLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 487
+V + V + VD + + C V L ++ + + +L + DPLV++M VEK P
Sbjct: 121 AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
Query: 488 DSTYEMVGGLD 520
TY +GGLD
Sbjct: 181 QETYADIGGLD 191
>AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase
subunit 1 variant protein.
Length = 440
Score = 50.8 bits (116), Expect = 3e-06
Identities = 34/131 (25%), Positives = 59/131 (45%)
Frame = +2
Query: 128 ITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKK 307
+ K+E ++ + + + +R Q Q L K R VG + + +D
Sbjct: 62 LLKLERIKDYLLMEEEFIRN-QEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH 120
Query: 308 VLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 487
+V + V + VD + + C V L ++ + + +L + DPLV++M VEK P
Sbjct: 121 AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
Query: 488 DSTYEMVGGLD 520
TY +GGLD
Sbjct: 181 QETYADIGGLD 191
>U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein.
Length = 418
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/83 (24%), Positives = 40/83 (48%)
Frame = +2
Query: 272 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 451
+G+ ++ +D+ +V + V + +D + N VAL S L +LP + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 452 PLVSLMMVEKVPDSTYEMVGGLD 520
+ ++ ++ PD Y +GG+D
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMD 171
>BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/83 (24%), Positives = 40/83 (48%)
Frame = +2
Query: 272 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 451
+G+ ++ +D+ +V + V + +D + N VAL S L +LP + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 452 PLVSLMMVEKVPDSTYEMVGGLD 520
+ ++ ++ PD Y +GG+D
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMD 171
>BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/83 (24%), Positives = 40/83 (48%)
Frame = +2
Query: 272 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 451
+G+ ++ +D+ +V + V + +D + N VAL S L +LP + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 452 PLVSLMMVEKVPDSTYEMVGGLD 520
+ ++ ++ PD Y +GG+D
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMD 171
>BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 387
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/83 (24%), Positives = 40/83 (48%)
Frame = +2
Query: 272 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 451
+G+ ++ +D+ +V + V + +D + N VAL S L +LP + D
Sbjct: 58 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 117
Query: 452 PLVSLMMVEKVPDSTYEMVGGLD 520
+ ++ ++ PD Y +GG+D
Sbjct: 118 SSIMMLTSDQKPDVMYADIGGMD 140
>BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/83 (24%), Positives = 40/83 (48%)
Frame = +2
Query: 272 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 451
+G+ ++ +D+ +V + V + +D + N VAL S L +LP + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 452 PLVSLMMVEKVPDSTYEMVGGLD 520
+ ++ ++ PD Y +GG+D
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMD 171
>AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo
sapiens] protein.
Length = 418
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/83 (24%), Positives = 40/83 (48%)
Frame = +2
Query: 272 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 451
+G+ ++ +D+ +V + V + +D + N VAL S L +LP + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 452 PLVSLMMVEKVPDSTYEMVGGLD 520
+ ++ ++ PD Y +GG+D
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMD 171
>AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein.
Length = 418
Score = 39.9 bits (89), Expect = 0.005
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = +2
Query: 272 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 451
+G+ ++ +D+ +V + V + +D + N VAL S L +LP + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSSYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 452 PLVSLMMVEKVPDSTYEMVGGLD 520
+ ++ + PD Y +GG+D
Sbjct: 149 SSIMMLTSGQKPDVMYADIGGMD 171
>BC011933-1|AAH11933.1| 259|Homo sapiens chromosome 6 open reading
frame 153 protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.012
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 53 Q*RNMTLTTKMEVDTVKGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVR 226
Q + + L K E +G RPY++ K E+ QL +AEK + L+R + N L+ K R
Sbjct: 187 QQQELHLALKQERRAQAQQGHRPYFLKKSEQRQLALAEKFKELKRSKKLENFLSRKRR 244
>BC006293-1|AAH06293.2| 259|Homo sapiens C6orf153 protein protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.012
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 53 Q*RNMTLTTKMEVDTVKGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVR 226
Q + + L K E +G RPY++ K E+ QL +AEK + L+R + N L+ K R
Sbjct: 187 QQQELHLALKQERRAQAQQGHRPYFLKKSEQRQLALAEKFKELKRSKKLENFLSRKRR 244
>AL136304-5|CAI19798.1| 259|Homo sapiens protein ( Human DNA
sequence from clone RP1-20C7 on chromosome 6p12.3-21.2
Contains the PPP2R5D gene for delta variant of protein
phosphatase 2).
Length = 259
Score = 38.7 bits (86), Expect = 0.012
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 53 Q*RNMTLTTKMEVDTVKGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVR 226
Q + + L K E +G RPY++ K E+ QL +AEK + L+R + N L+ K R
Sbjct: 187 QQQELHLALKQERRAQAQQGHRPYFLKKSEQRQLALAEKFKELKRSKKLENFLSRKRR 244
>M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human
immunodeficiency virus tat transactivator binding
protein-1 (tbp-1) mRNA, complete cds. ).
Length = 404
Score = 35.1 bits (77), Expect = 0.15
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 302 KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEK 481
K ++K + + + VD + V + +SY + + LP + D V M V++
Sbjct: 85 KCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDE 144
Query: 482 VPDSTYEMVGGLD 520
P Y +GGLD
Sbjct: 145 RPTEQYSDIGGLD 157
>CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein.
Length = 404
Score = 35.1 bits (77), Expect = 0.15
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 302 KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEK 481
K ++K + + + VD + V + +SY + + LP + D V M V++
Sbjct: 85 KCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDE 144
Query: 482 VPDSTYEMVGGLD 520
P Y +GGLD
Sbjct: 145 RPTEQYSDIGGLD 157
>BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein.
Length = 491
Score = 35.1 bits (77), Expect = 0.15
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 302 KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEK 481
K ++K + + + VD + V + +SY + + LP + D V M V++
Sbjct: 172 KCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDE 231
Query: 482 VPDSTYEMVGGLD 520
P Y +GGLD
Sbjct: 232 RPTEQYSDIGGLD 244
>BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 35.1 bits (77), Expect = 0.15
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 302 KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEK 481
K ++K + + + VD + V + +SY + + LP + D V M V++
Sbjct: 120 KCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDE 179
Query: 482 VPDSTYEMVGGLD 520
P Y +GGLD
Sbjct: 180 RPTEQYSDIGGLD 192
>BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 35.1 bits (77), Expect = 0.15
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 302 KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEK 481
K ++K + + + VD + V + +SY + + LP + D V M V++
Sbjct: 120 KCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDE 179
Query: 482 VPDSTYEMVGGLD 520
P Y +GGLD
Sbjct: 180 RPTEQYSDIGGLD 192
>BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 35.1 bits (77), Expect = 0.15
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 302 KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEK 481
K ++K + + + VD + V + +SY + + LP + D V M V++
Sbjct: 120 KCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDE 179
Query: 482 VPDSTYEMVGGLD 520
P Y +GGLD
Sbjct: 180 RPTEQYSDIGGLD 192
>AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase
subunit 3 variant protein.
Length = 424
Score = 35.1 bits (77), Expect = 0.15
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 302 KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEK 481
K ++K + + + VD + V + +SY + + LP + D V M V++
Sbjct: 105 KCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDE 164
Query: 482 VPDSTYEMVGGLD 520
P Y +GGLD
Sbjct: 165 RPTEQYSDIGGLD 177
>Y19209-1|CAB76829.1| 600|Homo sapiens type II hair keratin 3
protein.
Length = 600
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EE+Q+ + NLR ++ + NEL ++ L+
Sbjct: 355 WYQTKYEEMQVTAGQHCDNLRNIRNEINELTRLIQRLK 392
>X07695-1|CAA30534.1| 408|Homo sapiens cytokeratin 4 (408 AA)
protein.
Length = 408
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 125 YITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
Y TK+++LQ+ V + NL+ +++ ELN ++ LR
Sbjct: 218 YQTKVQQLQISVDQHGDNLKNTKSEIAELNRMIQRLR 254
>BC069647-1|AAH69647.1| 600|Homo sapiens keratin 84 protein.
Length = 600
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EE+Q+ + NLR ++ + NEL ++ L+
Sbjct: 355 WYQTKYEEMQVTAGQHCDNLRNIRNEINELTRLIQRLK 392
>BC042174-1|AAH42174.1| 534|Homo sapiens KRT4 protein protein.
Length = 534
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 125 YITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
Y TK+++LQ+ V + NL+ +++ ELN ++ LR
Sbjct: 344 YQTKVQQLQISVDQHGDNLKNTKSEIAELNRMIQRLR 380
>BC003630-1|AAH03630.2| 324|Homo sapiens KRT4 protein protein.
Length = 324
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 125 YITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
Y TK+++LQ+ V + NL+ +++ ELN ++ LR
Sbjct: 134 YQTKVQQLQISVDQHGDNLKNTKSEIAELNRMIQRLR 170
>AY043326-1|AAL14196.1| 534|Homo sapiens keratin 4 protein.
Length = 534
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 125 YITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
Y TK+++LQ+ V + NL+ +++ ELN ++ LR
Sbjct: 344 YQTKVQQLQISVDQHGDNLKNTKSEIAELNRMIQRLR 380
>AJ628420-1|CAF31524.1| 598|Homo sapiens type II hair keratin 4
protein.
Length = 598
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EE+Q+ + NLR ++ + NEL ++ L+
Sbjct: 353 WYQTKYEEMQVTAGQHCDNLRNIRNEINELTRLIQRLK 390
>BC113686-1|AAI13687.1| 511|Homo sapiens keratin 72 protein.
Length = 511
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 125 YITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
Y TKI+ELQ+ + +L+ +A+ +ELN ++ +R
Sbjct: 318 YQTKIQELQVTAGQHGDDLKLTKAEISELNRLIQRIR 354
>AY033496-1|AAK55109.1| 511|Homo sapiens keratin protein K6irs
protein.
Length = 511
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 125 YITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
Y TKI+ELQ+ + +L+ +A+ +ELN ++ +R
Sbjct: 318 YQTKIQELQVTAGQHGDDLKLTKAEISELNRLIQRIR 354
>AY033495-1|AAK55108.1| 510|Homo sapiens keratin protein K6irs
protein.
Length = 510
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 125 YITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
Y TKI+ELQ+ + +L+ +A+ +ELN ++ +R
Sbjct: 318 YQTKIQELQVTAGQHGDDLKLTKAEISELNRLIQRIR 354
>AK093060-1|BAC04039.1| 398|Homo sapiens protein ( Homo sapiens
cDNA FLJ35741 fis, clone TESTI2004163, moderately
similar to Mus musculus mRNA for type II cytokeratin. ).
Length = 398
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 125 YITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
Y TKI+ELQ+ + +L+ +A+ +ELN ++ +R
Sbjct: 205 YQTKIQELQVTAGQHGDDLKLTKAEISELNRLIQRIR 241
>Y19212-1|CAB76832.1| 551|Homo sapiens cytokeratin protein.
Length = 551
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + +E+N ++ LR
Sbjct: 341 WYQTKYEELQVTAGRHGDDLRNTKQEISEMNRMIQRLR 378
>Y17282-1|CAA76730.1| 551|Homo sapiens cytokeratin type II protein.
Length = 551
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + +E+N ++ LR
Sbjct: 341 WYQTKYEELQVTAGRHGDDLRNTKQEISEMNRMIQRLR 378
>AJ508777-1|CAD48514.1| 529|Homo sapiens keratin 6 irs4 protein.
Length = 529
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 125 YITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
Y TKI+ELQL + +L+ +++ ELN ++ +R
Sbjct: 333 YQTKIQELQLAASRHGDDLKHTRSEMVELNRLIQRIR 369
>Y19210-1|CAB76830.1| 507|Homo sapiens type II hair keratin 5
protein.
Length = 507
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 313 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 349
>Y19208-1|CAB76828.1| 493|Homo sapiens type II hair keratin 3
protein.
Length = 493
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 301 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 337
>Y13621-1|CAA73943.1| 505|Homo sapiens keratin protein.
Length = 505
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 296 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 332
>X99142-1|CAA67579.1| 483|Homo sapiens type II intermediate
filament of hair keratin protein.
Length = 483
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 293 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 329
>X99141-1|CAA67578.1| 493|Homo sapiens type II intermediate
filament of hair keratin protein.
Length = 493
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 301 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 337
>X99140-1|CAA67577.1| 507|Homo sapiens type II intermediate
filament of hair keratin protein.
Length = 507
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 313 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 349
>X81420-1|CAA57180.1| 425|Homo sapiens hair type II basic keratin
protein.
Length = 425
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 216 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 252
>X80197-1|CAA56488.1| 257|Homo sapiens keratin like protein.
Length = 257
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 48 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 84
>BC128063-1|AAI28064.1| 493|Homo sapiens keratin 83 protein.
Length = 493
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 301 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 337
>BC126935-1|AAI26936.1| 447|Homo sapiens KRT83 protein protein.
Length = 447
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 301 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 337
>BC117467-1|AAI17468.1| 505|Homo sapiens keratin, hair, basic, 1
protein.
Length = 505
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 296 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 332
>BC117465-1|AAI17466.1| 505|Homo sapiens keratin, hair, basic, 1
protein.
Length = 505
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 296 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 332
>BC069585-1|AAH69585.1| 486|Homo sapiens keratin 86 protein.
Length = 486
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 296 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 332
>BC069546-1|AAH69546.1| 493|Homo sapiens keratin 83 protein.
Length = 493
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 301 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 337
>BC006452-1|AAH06452.1| 244|Homo sapiens KRT81 protein protein.
Length = 244
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 35 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 71
>AJ000263-1|CAA03979.1| 486|Homo sapiens keratin protein Hb6
protein.
Length = 486
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRML 232
+Y +K EE++ V + LRR + + NELN ++ L
Sbjct: 296 WYRSKCEEMKATVIRHGETLRRTKEEINELNRMIQRL 332
>L42612-1|AAC41771.1| 564|Homo sapiens keratin type II protein.
Length = 564
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQITAGRHGDDLRNTKQEIAEINRMIQRLR 392
>BC034535-1|AAH34535.1| 564|Homo sapiens keratin 6B protein.
Length = 564
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQITAGRHGDDLRNTKQEIAEINRMIQRLR 392
>V01516-1|CAA24760.1| 357|Homo sapiens protein ( Human messenger
fragment encoding cytoskeletal keratin (type II). mRNA
from cultured epidermal cells from human foreskin. ).
Length = 357
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 148 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 185
>L42611-1|AAC41770.1| 564|Homo sapiens keratin type II protein.
Length = 564
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 392
>L42610-1|AAB60696.1| 384|Homo sapiens keratin type II protein.
Length = 384
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 175 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 212
>L42601-1|AAC41769.1| 564|Homo sapiens keratin type II protein.
Length = 564
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 392
>L42592-1|AAC41768.1| 564|Homo sapiens keratin type II protein.
Length = 564
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 392
>L42583-1|AAC41767.1| 564|Homo sapiens keratin type II protein.
Length = 564
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 392
>L00205-1|AAA59466.1| 563|Homo sapiens KRTL1 protein.
Length = 563
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 354 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 391
>BT006899-1|AAP35545.1| 564|Homo sapiens keratin 6A protein.
Length = 564
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 392
>BC139753-1|AAI39754.1| 564|Homo sapiens keratin 6A protein.
Length = 564
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 392
>BC130585-1|AAI30586.1| 564|Homo sapiens keratin 6C protein.
Length = 564
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 392
>BC130583-1|AAI30584.1| 564|Homo sapiens keratin 6C protein.
Length = 564
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 392
>BC125058-1|AAI25059.1| 564|Homo sapiens keratin 6A protein.
Length = 564
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 392
>BC110639-1|AAI10640.1| 564|Homo sapiens keratin 6C protein.
Length = 564
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 392
>BC069269-1|AAH69269.1| 564|Homo sapiens keratin 6A protein.
Length = 564
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 392
>BC014152-1|AAH14152.1| 564|Homo sapiens keratin 6A protein.
Length = 564
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 392
>BC008807-1|AAH08807.1| 564|Homo sapiens keratin 6A protein.
Length = 564
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 122 YYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLR 235
+Y TK EELQ+ +LR + + E+N ++ LR
Sbjct: 355 WYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLR 392
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,394,669
Number of Sequences: 237096
Number of extensions: 1370756
Number of successful extensions: 3977
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 3894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3977
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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