Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313A05f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73425-4|CAA97786.1|  667|Caenorhabditis elegans Hypothetical pr...    34   0.071
Z70755-2|CAA94785.1|  220|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z49966-5|CAA90245.1|  445|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U61954-11|AAL08035.1|  238|Caenorhabditis elegans Hypothetical p...    27   8.1  

>Z73425-4|CAA97786.1|  667|Caenorhabditis elegans Hypothetical
           protein F12F6.8 protein.
          Length = 667

 Score = 33.9 bits (74), Expect = 0.071
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -2

Query: 364 NICTITENDYNNKNSNGQRLLTHLQIV*FEYLKLEHH 254
           N+C++  +D N KN NG   L +LQI+    L  EHH
Sbjct: 191 NLCSLDISDANIKNLNGISHLKNLQILCIRNLDFEHH 227


>Z70755-2|CAA94785.1|  220|Caenorhabditis elegans Hypothetical
           protein K06A4.2 protein.
          Length = 220

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 110 FFDPIVTY--IMSIFVTECLIDKLHTGKLIRHNKN 208
           FF+P   +  +  IFV  CL+D +H   L+R + N
Sbjct: 42  FFNPSTRFRLLKIIFVLMCLVDIMHWAYLLRDDTN 76


>Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical
           protein F13D2.1 protein.
          Length = 1342

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/48 (25%), Positives = 29/48 (60%)
 Frame = -1

Query: 281 IRILKTRTSSLFLIRILSNKRRKQDFYYDESIYLYVVCQSNILSQILT 138
           I I K   + + +IR+++N+R K  F  D  +Y+  +  ++++S +++
Sbjct: 66  IGIPKEWQNDVSVIRVIANRRIKNGFSNDTMLYIPNLSNTSLVSSLIS 113


>Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical
           protein F13D2.1 protein.
          Length = 1342

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/48 (25%), Positives = 29/48 (60%)
 Frame = -1

Query: 281 IRILKTRTSSLFLIRILSNKRRKQDFYYDESIYLYVVCQSNILSQILT 138
           I I K   + + +IR+++N+R K  F  D  +Y+  +  ++++S +++
Sbjct: 66  IGIPKEWQNDVSVIRVIANRRIKNGFSNDTMLYIPNLSNTSLVSSLIS 113


>Z49966-5|CAA90245.1|  445|Caenorhabditis elegans Hypothetical
           protein F35C11.5 protein.
          Length = 445

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -2

Query: 256 HHFFLSEYYLTKEESKIFIMTNQFTCM*FVNQTFCHK 146
           H  FLS Y   K  S IF+  N F  + FV     +K
Sbjct: 33  HSIFLSAYKPNKFISSIFVCCNSFLLLNFVESFLFYK 69


>U61954-11|AAL08035.1|  238|Caenorhabditis elegans Hypothetical
           protein F41H10.12 protein.
          Length = 238

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 24/77 (31%), Positives = 34/77 (44%)
 Frame = -2

Query: 388 DNSQTAWRNICTITENDYNNKNSNGQRLLTHLQIV*FEYLKLEHHHFFLSEYYLTKEESK 209
           D+S  A  N  ++ E DY+ K  NG        ++ FE    +  HF  SEY LT+    
Sbjct: 171 DSSPEATENSFSVEEEDYSYK-LNG--------VIIFEGENRDEGHFLFSEYTLTE---T 218

Query: 208 IFIMTNQFTCM*FVNQT 158
            F ++   T   FV  T
Sbjct: 219 FFTVSRSLTNFIFVELT 235


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,343,175
Number of Sequences: 27780
Number of extensions: 228451
Number of successful extensions: 452
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)