Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313A05f
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g20210.1 68417.m02954 terpene synthase/cyclase family protein...    30   1.1  
At4g01540.1 68417.m00200 no apical meristem (NAM) family protein...    28   4.4  
At3g50280.1 68416.m05498 transferase family protein similar to a...    27   7.7  
At3g50160.1 68416.m05483 hypothetical protein contains Pfam prof...    27   7.7  
At2g31620.1 68415.m03863 receptor-like protein kinase-related co...    27   7.7  

>At4g20210.1 68417.m02954 terpene synthase/cyclase family protein
           (+)-delta-cadinene synthase isozyme XC14,
           Gossypiumarboreum, PIR2:S68366
          Length = 600

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = -2

Query: 280 FEYLKLEHHHFFLSEYYLTKEESKIFIMTNQFTCM*FVNQTFCHKY 143
           F+Y+ +E+H F ++ Y+  K   K  ++   FT +  ++ T C +Y
Sbjct: 314 FKYVIVENHFFAITMYFEPKFSQKRIMLAKYFTVLVLLDDT-CDRY 358


>At4g01540.1 68417.m00200 no apical meristem (NAM) family protein
           similar to  NAC1 (GI:7716952) {Medicago truncatula};
           contains Pfam PF02365 : No apical meristem (NAM) protein
          Length = 423

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = -1

Query: 326 KFQRPKAFDPSTNCIIRILKTRTSSLFLIRILSNKRRKQDFYYDESIYLYVVCQSNILSQ 147
           K + P+A D   N    ++KT    LF++     + RK+  +    IYL  +   NI+S 
Sbjct: 355 KQEIPRAVDAPMNNESSLVKTEKKGLFIVEDAMERNRKKPRF----IYLMKMIIGNIISV 410

Query: 146 IL 141
           +L
Sbjct: 411 LL 412


>At3g50280.1 68416.m05498 transferase family protein similar to
           anthranilate N-hydroxycinnamoyl/benzoyltransferase,
           Dianthus caryophyllus, PIR:T10717 [gi:2239091]; contains
           Pfam transferase family domain PF002458
          Length = 443

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/48 (25%), Positives = 26/48 (54%)
 Frame = -1

Query: 302 DPSTNCIIRILKTRTSSLFLIRILSNKRRKQDFYYDESIYLYVVCQSN 159
           DP T+ I R+  + +S+L +    + +  K + + DE++  Y+ C  +
Sbjct: 50  DPETHFISRLRTSLSSALDIYFPFAGRLNKVENHEDETVSFYINCDGS 97


>At3g50160.1 68416.m05483 hypothetical protein contains Pfam profile
           PF03140: Plant protein of unknown function
          Length = 511

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 436 KEIXXVYINRVLFFVEDNSQTAWRNICTITENDYNNKN 323
           +EI  + +N  +  + DN+ T+W N+C      Y  +N
Sbjct: 79  REIWVISLNDKMKTLGDNATTSWDNLCIYRVPPYLQEN 116


>At2g31620.1 68415.m03863 receptor-like protein kinase-related
           contains Pfam profile: PF01657 Domain of unknown
           function that is usually associated with protein kinase
           domain Pfam:PF00069; similar to receptor-like protein
           kinase 4 (GI:13506745) and receptor-like protein kinase
           5 (GI:13506747) [Arabidopsis thaliana]
          Length = 255

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -2

Query: 418 YINRVLFFVEDNSQTAWRNICTITENDYNNKNSNGQRLLTHL 293
           +I+ VL   + NS    ++IC  +E  Y  KNS   RL  HL
Sbjct: 20  FIHNVLSLNQTNSYL--QHICINSEGKYKAKNSYESRLKDHL 59


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,192,100
Number of Sequences: 28952
Number of extensions: 190182
Number of successful extensions: 411
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)