Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313A02f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73105-3|CAA97441.2|  205|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U28993-6|AAK31498.2|  639|Caenorhabditis elegans Hypothetical pr...    28   3.5  
AF316599-1|AAG38591.1|  639|Caenorhabditis elegans paracaspase p...    28   3.5  
Z77659-6|CAB01167.1|  401|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z66511-1|CAA91314.1|  537|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z81458-4|CAB03824.1|  623|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AL132949-35|CAI70419.1|  466|Caenorhabditis elegans Hypothetical...    27   8.1  
AL132949-34|CAB61101.3|  574|Caenorhabditis elegans Hypothetical...    27   8.1  
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z73105-3|CAA97441.2|  205|Caenorhabditis elegans Hypothetical
           protein R13.2 protein.
          Length = 205

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/67 (23%), Positives = 27/67 (40%)
 Frame = +3

Query: 138 YPAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKEFVEAQNKITRPYLDACPVQKSINE 317
           Y + + D +   D  G+K   P    ++P  +  K   +  N   RPY    P+      
Sbjct: 42  YESQQSDSSSSVDESGSKTSSPTSMQQNPSQDGRKNRKKGTNLYGRPYCPGRPLSMEERT 101

Query: 318 RLTELWN 338
           R+ +L N
Sbjct: 102 RIIQLHN 108


>U28993-6|AAK31498.2|  639|Caenorhabditis elegans Hypothetical
           protein F22D3.6 protein.
          Length = 639

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = +3

Query: 99  GTTILSSRNMLYDYPAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKEFVEAQNKI 269
           G T+ S    L        DE     +H  +   P RW+ DP+   TKE  E   K+
Sbjct: 66  GQTVGSLLARLQFLSRTYEDEFDSIQFHLRRKFKPLRWIPDPEQQVTKEIDEGNIKL 122


>AF316599-1|AAG38591.1|  639|Caenorhabditis elegans paracaspase
           protein.
          Length = 639

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = +3

Query: 99  GTTILSSRNMLYDYPAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKEFVEAQNKI 269
           G T+ S    L        DE     +H  +   P RW+ DP+   TKE  E   K+
Sbjct: 66  GQTVGSLLARLQFLSRTYEDEFDSIQFHLRRKFKPLRWIPDPEQQVTKEIDEGNIKL 122


>Z77659-6|CAB01167.1|  401|Caenorhabditis elegans Hypothetical
           protein F23B12.6 protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/58 (24%), Positives = 25/58 (43%)
 Frame = +3

Query: 123 NMLYDYPAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKEFVEAQNKITRPYLDACP 296
           N  Y     +R ET++ + + + + +P++   D D  E   F +        YL  CP
Sbjct: 21  NFTYSSTEQKRIETMLFENYNSLVLEPFKTTSDEDLAELTIFRQKHASYLLRYLKNCP 78


>Z66511-1|CAA91314.1|  537|Caenorhabditis elegans Hypothetical
           protein F07A11.1 protein.
          Length = 537

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = +1

Query: 361 SGRAADTSSSRTPVCRTKMRCTCKMVSTANLACSWTRTLCPKTARW 498
           SG A D  +  T  CR   RC   M     L  +   T+ P  A W
Sbjct: 490 SGAALDGVAHATTSCRRCARCARPMERKTTLFVNRGETILPHQANW 535


>Z81458-4|CAB03824.1|  623|Caenorhabditis elegans Hypothetical
           protein C03E10.5 protein.
          Length = 623

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +1

Query: 337 TTLNIHAPSGRAADTSSSRTPVCRTKMRCTCKMVSTANLACSWTRTLCP-KTARWRF 504
           TT+    P+   + T+++ TP        T  + +T+    + T T CP K  R+ F
Sbjct: 177 TTMVTSTPTTEKSSTTTTSTPTSEATSTTTAMITTTSGTTENPTTTDCPTKVCRYGF 233


>AL132949-35|CAI70419.1|  466|Caenorhabditis elegans Hypothetical
           protein Y53F4B.27b protein.
          Length = 466

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 291 CPVQKSINERLTELWNYPKYSCPFRKGSRYFFFKNTGL 404
           CP     +E+   LW + K+ CP       F  +N GL
Sbjct: 398 CPFSTP-HEQTGILWQFSKFECPINTSKIAFICENFGL 434


>AL132949-34|CAB61101.3|  574|Caenorhabditis elegans Hypothetical
           protein Y53F4B.27a protein.
          Length = 574

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 291 CPVQKSINERLTELWNYPKYSCPFRKGSRYFFFKNTGL 404
           CP     +E+   LW + K+ CP       F  +N GL
Sbjct: 506 CPFSTP-HEQTGILWQFSKFECPINTSKIAFICENFGL 542


>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
           protein C33E10.6 protein.
          Length = 1014

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = +3

Query: 12  PSIHHHLHTIKRPVYVPGDSTINRIVTCT-GTTILSSRNMLYDYPAVRRDETVVDDYHGT 188
           P   H LH    P Y P ++ +N   TC    T+      +  Y A+ +    +D  HG 
Sbjct: 679 PKDIHDLHN-DFPFY-PQNTKVNNQKTCKLMNTLFDKEKYVIHYKALIK---ALD--HGL 731

Query: 189 KIKDPYRWLEDPDSNETKEFV 251
           K+K  YR L   +SN  K ++
Sbjct: 732 KLKKVYRILTFDESNWMKGYI 752


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,133,145
Number of Sequences: 27780
Number of extensions: 243433
Number of successful extensions: 688
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)