Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS313A01f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    28   0.22 
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   2.0  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   2.7  
AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    23   4.7  
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    23   6.2  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   8.2  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 27.9 bits (59), Expect = 0.22
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 74  TDLSSPSTCTQNKRPEHTPLPSPV 145
           +D+SSP   T +  P+ TP P+PV
Sbjct: 168 SDMSSPGAPTGSSSPQITPRPTPV 191


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 235 PKPYARWTRYRRRPSLCAS 179
           P P +RW R+RRR  L  S
Sbjct: 3   PLPQSRWWRWRRRHLLTGS 21


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 267 TNVIYKSGRVLRNPMQGGP 211
           T   YK+G++  NP   GP
Sbjct: 53  TTAAYKAGKIAPNPFTAGP 71


>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical protein
           protein.
          Length = 195

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +1

Query: 169 LSLKTRTGMVVAGSGSTLHRVSEHPSTLVYYICSLLVFTYLQTG 300
           L  K R       +  T+  + EH   L + I +L V TYL  G
Sbjct: 105 LERKLRQAADEGSTNGTVITIGEHTIRLPHNISNLTVNTYLING 148


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 148 EHGRREWCVFRAFILCTGRW 89
           E+G   + VF  F L TG+W
Sbjct: 95  ENGHEVYAVFPRFHLYTGQW 114


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 256 IQEWKGAPKPYARWTRYRRRPSLCASSDSD 167
           ++EWK   +P      ++R  S+ ASS +D
Sbjct: 457 LREWKPFSEPTRHLDIFKRWKSILASSRTD 486


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,068
Number of Sequences: 2352
Number of extensions: 13774
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)