Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS313A01f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipi... 54 8e-08
At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipi... 54 8e-08
At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipi... 54 8e-08
At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipi... 54 8e-08
At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipi... 54 8e-08
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 33 0.15
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 33 0.15
At5g65910.1 68418.m08296 BSD domain-containing protein contains ... 31 0.47
At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family... 29 2.5
At1g11840.2 68414.m01362 lactoylglutathione lyase, putative / gl... 29 2.5
At1g11840.1 68414.m01361 lactoylglutathione lyase, putative / gl... 29 2.5
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 28 3.3
At1g54490.1 68414.m06215 5'-3' exoribonuclease (XRN4) identical ... 28 3.3
At5g67340.1 68418.m08492 armadillo/beta-catenin repeat family pr... 28 4.4
At1g59640.2 68414.m06708 basic helix-loop-helix (bHLH) family pr... 27 5.8
At5g17500.1 68418.m02053 glycosyl hydrolase family 5 protein / c... 27 7.7
At3g23640.1 68416.m02973 glycosyl hydrolase family 31 protein si... 27 7.7
>At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipid
subunit 3 / V-ATPase 16 kDa proteolipid subunit 3
(AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 53.6 bits (123), Expect = 8e-08
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 7 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 99
AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 124 AQQPKLFVGMILILIFAEALALYGLIVGIIL 154
Score = 30.3 bits (65), Expect = 0.82
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 13 QPRLFVGMILILIFAEVLGLYGLIVAIYL 99
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVII 75
>At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipid
subunit 1 / V-ATPase 16 kDa proteolipid subunit 1
(AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 53.6 bits (123), Expect = 8e-08
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 7 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 99
AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 124 AQQPKLFVGMILILIFAEALALYGLIVGIIL 154
Score = 30.3 bits (65), Expect = 0.82
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 13 QPRLFVGMILILIFAEVLGLYGLIVAIYL 99
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVII 75
>At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipid
subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
(AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16
kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16
kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}
GI:926929; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 53.6 bits (123), Expect = 8e-08
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 7 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 99
AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 124 AQQPKLFVGMILILIFAEALALYGLIVGIIL 154
Score = 30.3 bits (65), Expect = 0.82
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 13 QPRLFVGMILILIFAEVLGLYGLIVAIYL 99
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVII 75
>At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipid
subunit 4 / V-ATPase 16 kDa proteolipid subunit 4
(AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP
synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 166
Score = 53.6 bits (123), Expect = 8e-08
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 7 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 99
AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 126 AQQPKLFVGMILILIFAEALALYGLIVGIIL 156
Score = 30.3 bits (65), Expect = 0.82
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 13 QPRLFVGMILILIFAEVLGLYGLIVAIYL 99
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 49 RPELVMKSIVPVVMAGVLGIYGLIIAVII 77
>At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipid
subunit 2 / V-ATPase 16 kDa proteolipid subunit 2
(AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP
synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis
thaliana}, nearly identical to vacuolar H+-ATPase
proteolipid (16 kDa) subunit GI:755147 from [Gossypium
hirsutum]
Length = 165
Score = 53.6 bits (123), Expect = 8e-08
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +1
Query: 7 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 99
AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 125 AQQPKLFVGMILILIFAEALALYGLIVGIIL 155
Score = 30.3 bits (65), Expect = 0.82
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 13 QPRLFVGMILILIFAEVLGLYGLIVAIYL 99
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 48 RPELVMKSIVPVVMAGVLGIYGLIIAVII 76
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 7 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 99
AQ LFV +++I IF LGL+G+IV I +
Sbjct: 141 AQNSTLFVKILVIEIFGSALGLFGVIVGIIM 171
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 10 QQPRLFVGMILILIFAEVLGLYGLIVAIYL 99
+ PR+ ++ +IF E + +YG+IVAI L
Sbjct: 58 EAPRITSKNLISVIFCEAVAIYGVIVAIIL 87
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 7 AQQPRLFVGMILILIFAEVLGLYGLIVAIYL 99
AQ LFV +++I IF LGL+G+IV I +
Sbjct: 139 AQNSTLFVKILVIEIFGSALGLFGVIVGIIM 169
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 10 QQPRLFVGMILILIFAEVLGLYGLIVAIYL 99
+ PR+ ++ +IF E + +YG+IVAI L
Sbjct: 56 EAPRITSKNLISVIFCEAVAIYGVIVAIIL 85
>At5g65910.1 68418.m08296 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 432
Score = 31.1 bits (67), Expect = 0.47
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -3
Query: 231 NPMQGGPATGDDHPCARLQTQIMS---IEARSTGDGSGVCSGRLFCVQVDGDDKSVKTQY 61
NP++ D HP + QI+ IE RST S S R VQVD +D +
Sbjct: 289 NPVESSDVETDKHPIESKEIQIVDKSVIEERSTSTAS---SSRFINVQVDDEDDDDADDW 345
Query: 60 FSENKNKNHS 31
++ + + S
Sbjct: 346 LNDEETSSVS 355
>At1g21580.1 68414.m02698 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1696
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 276 EQGTNVIYKSGRVLRNPMQGGPATGDDHPCARLQTQIMSIEARSTGDGSGV 124
+ + + K +LR P G P P + +Q ++E +STG + V
Sbjct: 1455 QSNNSYVRKGNSLLRKPSHGSPGAALGIPPSAIQLNHFTVEDKSTGSSNMV 1505
>At1g11840.2 68414.m01362 lactoylglutathione lyase, putative /
glyoxalase I, putative highly similar to putative
lactoylglutathione lyase SP:Q39366 from [Brassica
oleracea]
Length = 283
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -3
Query: 270 GTNVIYKSGRVLR--NPMQGGPATGDDHPCARLQTQIMS 160
GT+ +YKSG V++ N GG T + P L T+I+S
Sbjct: 223 GTDDVYKSGEVIKIVNQELGGKITREAGPLPGLGTKIVS 261
>At1g11840.1 68414.m01361 lactoylglutathione lyase, putative /
glyoxalase I, putative highly similar to putative
lactoylglutathione lyase SP:Q39366 from [Brassica
oleracea]
Length = 283
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -3
Query: 270 GTNVIYKSGRVLR--NPMQGGPATGDDHPCARLQTQIMS 160
GT+ +YKSG V++ N GG T + P L T+I+S
Sbjct: 223 GTDDVYKSGEVIKIVNQELGGKITREAGPLPGLGTKIVS 261
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 68 VFTDLSSPSTCTQNKRPEHTPLPSP 142
+F L++ + C N P+H P+PSP
Sbjct: 18 IFFTLTAATDCGCNPSPKHKPVPSP 42
>At1g54490.1 68414.m06215 5'-3' exoribonuclease (XRN4) identical to
XRN4 [Arabidopsis thaliana] GI:11875626; contains Pfam
domain PF03159: Putative 5'-3' exonuclease domain
Length = 947
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 200 SPVAGPPCIGFRSTLPLLYITFVPCSFSHISRP 298
SPV G PCI L + Y+ P SHIS P
Sbjct: 671 SPVNGLPCIEQNRALNVTYL--CPAKHSHISEP 701
>At5g67340.1 68418.m08492 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 707
Score = 27.9 bits (59), Expect = 4.4
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +1
Query: 55 AEVL-GLYGLIVAIYLYXXXXXXXXXXXVARAPSLYAHYLSLKTRTGMVVAGSGSTLHRV 231
AE L GL L ++ Y R PS + LSL+ T V+ SG T RV
Sbjct: 209 AEYLDGLISLTTQMHEYLSDIKQAQLRCPVRVPSDFRCSLSLELMTDPVIVASGQTFERV 268
>At1g59640.2 68414.m06708 basic helix-loop-helix (bHLH) family
protein
Length = 343
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 275 SFSHISRPVQPCCCGCSASRDVNLYIFTKN 364
SF H ++ C C CS ++ IF++N
Sbjct: 259 SFKHCNKRSDLCFCSCSPKTELKTTIFSQN 288
>At5g17500.1 68418.m02053 glycosyl hydrolase family 5 protein /
cellulase family protein predicted protein F3F19.15 -
Arabidopsis thaliana, EMBL:AC007357
Length = 526
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = -3
Query: 225 MQGGPATGDDHPCARLQTQIMSIEARSTGDGSGVCSGRLFCVQVDGDDKSV 73
++G A G R+ T+I I A G L C+ VD D+ V
Sbjct: 453 LEGETAVGKSVKLGRICTKIEQISATKMHLSFNTSDGSLVCLDVDSDNNVV 503
>At3g23640.1 68416.m02973 glycosyl hydrolase family 31 protein
similar to alpha-glucosidase II from SP:Q9F234 [Bacillus
thermoamyloliquefaciens]; contains Pfam profile: PF01055
Glycosyl hydrolases family 31
Length = 991
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -3
Query: 162 SIEARSTGDGSGVCSGRLFCVQV 94
SIEARS G GSG S RL C++V
Sbjct: 864 SIEARSVGAGSGGFS-RLVCLRV 885
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,907,983
Number of Sequences: 28952
Number of extensions: 260873
Number of successful extensions: 718
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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