Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312H07f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 294 1e-79
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 294 1e-79
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 294 1e-79
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 294 1e-79
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 234 2e-61
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 76 9e-14
CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein. 31 3.2
BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying pro... 31 3.2
AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein. 31 3.2
AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens ... 31 3.2
BC037399-1|AAH37399.1| 446|Homo sapiens KIAA0415 protein protein. 29 7.5
BC008841-1|AAH08841.2| 391|Homo sapiens KIAA0415 protein protein. 29 7.5
AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptas... 29 7.5
AB007875-1|BAA24845.1| 634|Homo sapiens KIAA0415 protein. 29 7.5
AK223187-1|BAD96907.1| 201|Homo sapiens hypothetical protein FL... 29 9.9
AK127331-1|BAC86934.1| 178|Homo sapiens , member 1 (TRPV1). pr... 29 9.9
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 294 bits (722), Expect = 1e-79
Identities = 134/173 (77%), Positives = 150/173 (86%)
Frame = +3
Query: 3 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 182
RR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSE
Sbjct: 11 RRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSE 70
Query: 183 CSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLT 362
C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT
Sbjct: 71 CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLT 130
Query: 363 EAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCG 521
EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCG
Sbjct: 131 PEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCG 183
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 294 bits (722), Expect = 1e-79
Identities = 134/173 (77%), Positives = 150/173 (86%)
Frame = +3
Query: 3 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 182
RR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSE
Sbjct: 11 RRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSE 70
Query: 183 CSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLT 362
C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT
Sbjct: 71 CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLT 130
Query: 363 EAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCG 521
EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCG
Sbjct: 131 PEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCG 183
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 294 bits (722), Expect = 1e-79
Identities = 134/173 (77%), Positives = 150/173 (86%)
Frame = +3
Query: 3 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 182
RR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSE
Sbjct: 11 RRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSE 70
Query: 183 CSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLT 362
C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT
Sbjct: 71 CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLT 130
Query: 363 EAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCG 521
EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCG
Sbjct: 131 PEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCG 183
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 294 bits (722), Expect = 1e-79
Identities = 134/173 (77%), Positives = 150/173 (86%)
Frame = +3
Query: 3 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 182
RR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSE
Sbjct: 11 RRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSE 70
Query: 183 CSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLT 362
C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT
Sbjct: 71 CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLT 130
Query: 363 EAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCG 521
EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCG
Sbjct: 131 PEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCG 183
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 234 bits (572), Expect = 2e-61
Identities = 117/173 (67%), Positives = 133/173 (76%)
Frame = +3
Query: 3 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 182
RR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGG
Sbjct: 11 RRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG------------------- 51
Query: 183 CSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLT 362
C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT
Sbjct: 52 C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLT 110
Query: 363 EAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCG 521
EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCG
Sbjct: 111 PEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCG 163
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 75.8 bits (178), Expect = 9e-14
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +3
Query: 357 LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCG 521
LT EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCG
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCG 55
>CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein.
Length = 201
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 336 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 482
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying
protein 6 protein.
Length = 201
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 336 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 482
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein.
Length = 201
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 336 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 482
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ11749 fis, clone HEMBA1005558, weakly similar to
NUCLEAR PROTEIN SNF7. ).
Length = 201
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 336 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 482
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>BC037399-1|AAH37399.1| 446|Homo sapiens KIAA0415 protein protein.
Length = 446
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 505 RLATQASKRPVWNCSSRAPSTL 440
R A AS+RP+W+ S RAPS L
Sbjct: 329 RSAPAASERPLWDTSLRAPSCL 350
>BC008841-1|AAH08841.2| 391|Homo sapiens KIAA0415 protein protein.
Length = 391
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 505 RLATQASKRPVWNCSSRAPSTL 440
R A AS+RP+W+ S RAPS L
Sbjct: 69 RSAPAASERPLWDTSLRAPSCL 90
>AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptase
protein.
Length = 523
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 202 RVLRVEHSDPQEKLPVSRRSARYLVFPPRERTE 104
R R E PQ+ + V RS R L PPR RT+
Sbjct: 411 RTARCELRSPQQPVSVPGRSPRALWRPPRRRTQ 443
>AB007875-1|BAA24845.1| 634|Homo sapiens KIAA0415 protein.
Length = 634
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 505 RLATQASKRPVWNCSSRAPSTL 440
R A AS+RP+W+ S RAPS L
Sbjct: 506 RSAPAASERPLWDTSLRAPSCL 527
>AK223187-1|BAD96907.1| 201|Homo sapiens hypothetical protein
FLJ11749 variant protein.
Length = 201
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 336 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 482
GRKK +++TE +AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQGKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AK127331-1|BAC86934.1| 178|Homo sapiens , member 1 (TRPV1).
protein.
Length = 178
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 267 NAIVVVDATPFRQWYESHYTLPLGRKKGAKLT 362
N I+ V TPF W + H++ P G LT
Sbjct: 5 NPIIAVFRTPFAPWLQFHWSAPFSAWLGTVLT 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,770,647
Number of Sequences: 237096
Number of extensions: 1613367
Number of successful extensions: 3756
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3756
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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