SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312H05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      58   4e-11
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      58   4e-11
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   2.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   5.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   5.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   6.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 58.4 bits (135), Expect = 4e-11
 Identities = 25/75 (33%), Positives = 46/75 (61%)
 Frame = +1

Query: 229 GCMRRPHVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKE 408
           G  ++PH+K+P+NAFM++ + MR ++ AE     +A +++ LG  W  L  EE+  + + 
Sbjct: 472 GEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGREEQAKYYEL 531

Query: 409 ADKLRTQHKKQHPDY 453
           A + R  H + +PD+
Sbjct: 532 ARRERQLHMQLYPDW 546


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 58.4 bits (135), Expect = 4e-11
 Identities = 25/75 (33%), Positives = 46/75 (61%)
 Frame = +1

Query: 229 GCMRRPHVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKE 408
           G  ++PH+K+P+NAFM++ + MR ++ AE     +A +++ LG  W  L  EE+  + + 
Sbjct: 364 GEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGREEQAKYYEL 423

Query: 409 ADKLRTQHKKQHPDY 453
           A + R  H + +PD+
Sbjct: 424 ARRERQLHMQLYPDW 438


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 349 SLGSMWKN-LSEEEKLPFIKEADKLR 423
           SLG  W+N +S    +PFIK+  K++
Sbjct: 264 SLG-WWENYISRHSPIPFIKKLGKIK 288


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 349 SLGSMWKN-LSEEEKLPFIKEADKLR 423
           SLG  W+N +S    +PFIK+  K++
Sbjct: 264 SLG-WWENYISRHSPIPFIKKLGKIK 288


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 349 SLGSMWKN-LSEEEKLPFIKEADKLR 423
           SLG  W+N +S    +PFIK+  K++
Sbjct: 264 SLG-WWENYISRHSPIPFIKKLGKIK 288


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 349 SLGSMWKN-LSEEEKLPFIKEADKLR 423
           SLG  W+N +S    +PFIK+  K++
Sbjct: 264 SLG-WWENYISRHSPIPFIKKLGKIK 288


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 14/63 (22%), Positives = 31/63 (49%)
 Frame = +1

Query: 166 VGKLVKIFDYDTILPQPTKGGGCMRRPHVKRPMNAFMVFAQAMRRRLSAERPSLHNAELS 345
           +GK++ + + D +     KGGG ++    +  + A +     M  R+  E+P + ++E+ 
Sbjct: 122 LGKMIGLPE-DFLACSGGKGGGVIQGTASEATLVALLGAKARMIDRVKKEKPEMSDSEIV 180

Query: 346 KSL 354
             L
Sbjct: 181 AKL 183


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 272 SWCSRKRCAAVCRPNDPP 325
           S  S   CA  CR  +PP
Sbjct: 101 SLSSPDECARACREGEPP 118


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 272 SWCSRKRCAAVCRPNDPP 325
           S  S   CA  CR  +PP
Sbjct: 101 SLSSPDECARACREGEPP 118


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 303 FVGRTTLPAQRRTQQIIRIHVEKFKR 380
           F+G TT   +RR+    R  +  FKR
Sbjct: 167 FIGGTTGKLRRRSTAASRSRLAAFKR 192


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 288 SDAPPFVGRTTLPAQ 332
           ++A P+V  TT+P Q
Sbjct: 325 NEAQPYVRNTTVPTQ 339


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 288 SDAPPFVGRTTLPAQ 332
           ++A P+V  TT+P Q
Sbjct: 273 NEAQPYVRNTTVPTQ 287


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 288 SDAPPFVGRTTLPAQ 332
           ++A P+V  TT+P Q
Sbjct: 456 NEAQPYVRNTTVPTQ 470


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,478
Number of Sequences: 336
Number of extensions: 2915
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -