Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312H05f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0605 + 4497308-4497472,4497719-4497904,4498898-4499003,449... 55 4e-08
05_01_0562 + 4907937-4907990,4908890-4909075,4909180-4909285,490... 50 1e-06
02_05_0261 + 27243898-27243938,27244068-27244157,27244293-272443... 49 3e-06
02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217 48 6e-06
08_01_0008 - 65366-65497,65588-65759,65846-65972,66058-66140,662... 46 1e-05
01_06_0175 + 27229878-27230056,27231102-27231159,27231230-272312... 44 7e-05
06_03_1487 + 30477615-30477658,30477778-30477891,30477941-304780... 40 0.002
02_03_0176 + 16010806-16011095,16011983-16012061,16012389-160124... 37 0.009
01_03_0302 + 14790674-14791354 33 0.14
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 31 0.42
04_04_0814 + 28266590-28266615,28266780-28266860,28266986-282670... 30 0.98
01_02_0130 - 11424904-11425142,11425295-11425416,11425461-114255... 30 0.98
10_08_0964 + 21906737-21907993 30 1.3
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 29 2.3
09_04_0260 - 16197522-16197669,16198027-16198130,16198508-161987... 29 3.0
07_01_0146 - 1068314-1068656,1069349-1069507,1069642-1069835 29 3.0
02_03_0238 + 16730444-16730448,16730484-16730586,16732043-167320... 29 3.0
10_08_0383 - 17424194-17425567 28 4.0
04_04_1445 - 33658355-33658417,33658536-33658669,33659056-336591... 28 4.0
12_01_1023 + 10458092-10458397,10459126-10459254,10459335-104595... 28 5.2
09_04_0168 - 15295442-15295477,15295478-15295552,15295660-152957... 28 5.2
11_01_0699 - 5757410-5757458,5757760-5757831,5758084-5758152,575... 27 9.1
10_01_0171 + 1917520-1918056,1919201-1919336,1921873-1922060,192... 27 9.1
05_01_0421 + 3308692-3309070,3309199-3309339,3309776-3309897,331... 27 9.1
03_02_0459 + 8649448-8651994 27 9.1
>01_01_0605 +
4497308-4497472,4497719-4497904,4498898-4499003,
4499062-4499216,4499341-4499424,4499498-4499589,
4499729-4499837,4499944-4500030,4500153-4500245,
4501144-4501341,4501481-4501632,4501724-4501874,
4501975-4502073,4502159-4502326,4502624-4502702,
4502870-4503000
Length = 684
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/68 (33%), Positives = 40/68 (58%)
Frame = +1
Query: 253 KRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRTQH 432
KR M FM F+ A R + P L E++K LG MW+ ++ EEK P+I+++ + ++
Sbjct: 600 KRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMWQKMTGEEKQPYIQQSQVDKKRY 659
Query: 433 KKQHPDYK 456
+K+ Y+
Sbjct: 660 EKESAVYR 667
>05_01_0562 +
4907937-4907990,4908890-4909075,4909180-4909285,
4909377-4909513,4909989-4910072,4910157-4910248,
4910358-4910466,4910554-4910640,4910737-4910829,
4911384-4911581,4911659-4911810,4911910-4912060,
4912174-4912272,4912362-4912535,4912680-4912758,
4912858-4912979
Length = 640
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/68 (29%), Positives = 39/68 (57%)
Frame = +1
Query: 253 KRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRTQH 432
KR + FM F++A R L P L E++K LG W+ ++ EEK P+++++ + ++
Sbjct: 559 KRAIAPFMYFSKAERANLKNSNPELATTEIAKKLGERWQKMTAEEKQPYVEQSQVDKKRY 618
Query: 433 KKQHPDYK 456
++ Y+
Sbjct: 619 AEESAAYR 626
>02_05_0261 +
27243898-27243938,27244068-27244157,27244293-27244350,
27244441-27244485,27244778-27244855,27244940-27245041,
27245150-27245173
Length = 145
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 253 KRPMNAFMVFAQAMRRRLSAERPSLHN-AELSKSLGSMWKNLSEEEKLPFIKEADKLRTQ 429
KRP +AF VF R+ A P + A +SK+ G W+ +SE+EK P++ +A + +
Sbjct: 34 KRPPSAFFVFMSEFRQEYQAAHPDNKSVAAVSKAAGEKWRAMSEQEKAPYVDKAGQKKQD 93
Query: 430 HKKQHPDY 453
++K ++
Sbjct: 94 YEKTKANF 101
>02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217
Length = 504
Score = 47.6 bits (108), Expect = 6e-06
Identities = 24/68 (35%), Positives = 39/68 (57%)
Frame = +1
Query: 253 KRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRTQH 432
K+PM+A+ V+ Q R L AE+ ++ E+ + G WK +SE EK PF A K R ++
Sbjct: 286 KQPMSAYFVYTQQRRAALVAEKKNV--PEIGRITGEEWKAMSEAEKAPFEAAARKQREEY 343
Query: 433 KKQHPDYK 456
+ + Y+
Sbjct: 344 QVEMAAYR 351
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/67 (29%), Positives = 40/67 (59%)
Frame = +1
Query: 253 KRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRTQH 432
K+P ++F++F++ RR+L+ ERP + ++ L+ + WK L E EK + +A + +
Sbjct: 415 KKPASSFLLFSKEARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAWNGKAAEAMAAY 474
Query: 433 KKQHPDY 453
K+ +Y
Sbjct: 475 KRDMEEY 481
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 253 KRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPF 399
K+P A++++ + + E P E+S +LG+ WK L EEK P+
Sbjct: 158 KKPCPAYVLWCKDQWNEIKKESPDADFKEVSNALGAKWKALGAEEKQPY 206
>08_01_0008 -
65366-65497,65588-65759,65846-65972,66058-66140,
66232-66329
Length = 203
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +1
Query: 253 KRPMNAFMVFAQAMRRRLSAERPSLHNAE-LSKSLGSMWKNLSEEEKLPFIKEADKLRTQ 429
KRP AF +F R+ AE P + ++K G WK++S+E+K P++ +A +L+ +
Sbjct: 93 KRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAELKAE 152
Query: 430 H 432
+
Sbjct: 153 Y 153
>01_06_0175 +
27229878-27230056,27231102-27231159,27231230-27231274,
27232711-27232791,27232884-27232922
Length = 133
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 208 PQPTKGGGCMRRPHVKRPMNAFMVFAQAMRRRLSAERPSLHN-AELSKSLGSMWKNLSEE 384
P KG + R K+P AF F + R+ E PS+ + E+ K+ G W ++ E
Sbjct: 35 PSRKKGQPLVDRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFE 94
Query: 385 EKLPFIKEADKLRTQHKK 438
E++ + A + R +++K
Sbjct: 95 ERVKYYDIATEKRAEYEK 112
>06_03_1487 +
30477615-30477658,30477778-30477891,30477941-30478028,
30478186-30478230,30478330-30478410,30478498-30478608,
30478907-30478927
Length = 167
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 286 QAMRRRLSAERPSLHN-AELSKSLGSMWKNLSEEEKLPFIKEADKLRTQHKKQHPDY-KY 459
+ R+ + P + A + K+ G WK+L+E +K P++ +A+KL+ ++ K Y K
Sbjct: 64 EEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNKAIAAYNKG 123
Query: 460 QPRRRKPP 483
+ +K P
Sbjct: 124 ESTAKKAP 131
>02_03_0176 +
16010806-16011095,16011983-16012061,16012389-16012464,
16012541-16012630,16012878-16013031,16013172-16013181,
16013240-16013407,16014087-16014485,16014580-16014990
Length = 558
Score = 37.1 bits (82), Expect = 0.009
Identities = 22/83 (26%), Positives = 42/83 (50%)
Frame = +1
Query: 247 HVKRPMNAFMVFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRT 426
H K + + F Q R+L E P + +SK +G W NL E+K + ++ + +
Sbjct: 375 HPKPNRSGYNFFFQDQHRKLKPEYPG-QDRLISKMIGERWNNLGPEDKAVYQEKGVEDKA 433
Query: 427 QHKKQHPDYKYQPRRRKPPLASA 495
++++Q Y+ Q R P+++A
Sbjct: 434 RYQRQLALYREQ--RTGQPISNA 454
>01_03_0302 + 14790674-14791354
Length = 226
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 199 TILPQPTKGGGCMRRP--HVKRPMNAFMVFAQAMRRRLS 309
T LPQP KG GC R P V+ PM +++ A RR S
Sbjct: 73 TSLPQPKKGRGCPRHPLEEVEEPMTG-LIYCVATRRARS 110
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 31.5 bits (68), Expect = 0.42
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +1
Query: 316 RPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRTQHKKQHPDYKYQPRRR 474
R H++E K L W+ + + + P + RT+H + P+ PRRR
Sbjct: 248 RKGRHDSEEPKDLLPPWRRVRHDSEEPKDLSPPRRRTRHDSEEPEDLSPPRRR 300
>04_04_0814 +
28266590-28266615,28266780-28266860,28266986-28267043,
28267143-28267187,28268653-28268721,28268821-28268931,
28269038-28269046
Length = 132
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 253 KRPMNAFMVFAQAMRRRLSAERPSLHN-AELSKSLGSMWKNLSEEEKLPF 399
KR + F F R + + P+ A ++K+ G W+ +S+EEK +
Sbjct: 26 KRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSDEEKAQY 75
>01_02_0130 -
11424904-11425142,11425295-11425416,11425461-11425546,
11425642-11425858,11426788-11426832,11428385-11428593,
11428706-11428936
Length = 382
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +1
Query: 355 GSMW-KNLSEEEKLP--FIKEADKLRTQHKKQHPDYKY 459
GSMW N E++L +K AD Q + HPDY++
Sbjct: 341 GSMWTSNQEHEQQLTKSLLKAADDWLCQRRVNHPDYRF 378
>10_08_0964 + 21906737-21907993
Length = 418
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 249 VWTTHTPTTFRWLRQYCIVV 190
+WTT++P+ W R+YCI V
Sbjct: 325 IWTTNSPSFDDWERRYCIYV 344
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -3
Query: 318 SFGRQTAAHRLREHHECIHRSLDVWT---THTPTTFRWL 211
S G++ ++H+ + H+C+HR + P TF+WL
Sbjct: 823 SCGKRFSSHKYLKRHQCVHRDERPFKCPWDGCPMTFKWL 861
>09_04_0260 -
16197522-16197669,16198027-16198130,16198508-16198719,
16198795-16198900,16199006-16199119,16199200-16199417,
16199837-16199900,16199982-16200335,16200609-16200767,
16201486-16202907
Length = 966
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +2
Query: 305 CRPNDPPCTTPNSANH*DPCGKI*AKRRSCLSLKKQISYER 427
C D P PNS N +PCG+ ++R + + + +
Sbjct: 466 CLDGDKPAKEPNSDNQNEPCGESNVEKRRVMEWLRNLGLSK 506
>07_01_0146 - 1068314-1068656,1069349-1069507,1069642-1069835
Length = 231
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 379 EEEKLPFIKEADKLRTQHKKQHPDYKYQPRRRKPPLASASTP 504
EEE++ ++EA + T+ K P Y P + +AS+S+P
Sbjct: 142 EEEEVVVVEEAAEEDTEGKNYSPGYTPSPDHPETGVASSSSP 183
>02_03_0238 +
16730444-16730448,16730484-16730586,16732043-16732099,
16732198-16732346,16732450-16732545,16732620-16732695,
16732810-16732883,16732991-16733408
Length = 325
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 301 RLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRTQHK 435
R + P L + K +WK +SEEE L KE DK + H+
Sbjct: 16 RKEFDHPKLQADTIGKRF--LWKCISEEELLQATKELDKELSMHE 58
>10_08_0383 - 17424194-17425567
Length = 457
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 430 HKKQHPDYKYQPRRRKPPLASASTP 504
H HP ++ PRRR P +S+S+P
Sbjct: 89 HAPPHPPPRHLPRRRSPFTSSSSSP 113
>04_04_1445 -
33658355-33658417,33658536-33658669,33659056-33659116,
33659197-33659356,33660032-33660081,33662237-33662290,
33662630-33662704,33662821-33662949,33663065-33663152,
33663266-33663372,33663513-33663561,33663657-33663760,
33663941-33663980,33664409-33664659,33664674-33664686,
33665846-33666355,33666437-33667657,33667973-33668221,
33668305-33668531
Length = 1194
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 238 RRPHVKRPMNAFMVFAQAMRRRLSAERPSLH 330
R H + P + A+ +RR LS RPSLH
Sbjct: 29 RSTHRRTPHGSDSTVARLLRRALSRSRPSLH 59
>12_01_1023 +
10458092-10458397,10459126-10459254,10459335-10459553,
10459649-10459987,10460095-10460199,10460697-10460807,
10461438-10461688,10462023-10462146,10462440-10462716,
10463212-10463357,10463449-10463598,10463678-10463910,
10464246-10464375,10464406-10464510,10464636-10464914
Length = 967
Score = 27.9 bits (59), Expect = 5.2
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = -1
Query: 512 LTLGVEAEASGGFRRRGWYL*SGCCFLCCVRNLSAS----LMKGSFSSSLKFFHMDPNDL 345
L+ G + SG RRG G C L + S ++KGS S FH+ N L
Sbjct: 438 LSSGEYIQMSGRAGRRGIDQ-RGICILMVDEKMEPSTAKMILKGSADSLNSAFHLSYNML 496
Query: 344 LSSALCREG 318
L+ C +G
Sbjct: 497 LNQIRCEDG 505
>09_04_0168 -
15295442-15295477,15295478-15295552,15295660-15295722,
15296095-15296319,15296421-15296562,15296678-15296839,
15298148-15298320,15300352-15300882
Length = 468
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -3
Query: 252 DVWTTHTPTTFRWL-RQYCIVVKY 184
D+WT HTP F L R Y +VK+
Sbjct: 182 DLWTDHTPWPFNQLPRSYSFLVKH 205
>11_01_0699 -
5757410-5757458,5757760-5757831,5758084-5758152,
5758329-5758477,5758568-5758699,5758784-5759109,
5759330-5759399,5759684-5759738,5760322-5760377,
5760500-5760700,5761466-5761651,5761756-5761906,
5761978-5762206,5762321-5762582,5762858-5762959
Length = 702
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 231 PTTFRWLRQYCIVVKYFHE-FSDGLVYLQLVPGPVAL 124
PT F+ ++ C +KY HE + +L L PG + L
Sbjct: 130 PTRFKIIKGTCEGLKYLHEGLKPPIYHLDLKPGNILL 166
>10_01_0171 +
1917520-1918056,1919201-1919336,1921873-1922060,
1922491-1922694,1923913-1924425
Length = 525
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 334 AELSKSLGSMWKNLSEEEKLPFIKEADKLRTQHKKQHPDYKYQPRRRK 477
A+ + GS W+ +EE + PF+ E + P+ +Q R+K
Sbjct: 142 ADRQRWKGSRWRPWAEERQAPFVVELASRSRRRDGLSPEALWQEYRQK 189
>05_01_0421 +
3308692-3309070,3309199-3309339,3309776-3309897,
3310369-3310632,3310719-3310849,3311254-3311461,
3311564-3311632,3311722-3311799,3312448-3312621
Length = 521
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 273 HGVRASDAPPFVGRTTLPAQRRTQQIIRIHVEKFKR 380
HG AS P + T P R++ +I+R+ V++ ++
Sbjct: 97 HGTLASRPLPPIHPPTTPRVRKSSRIVRLEVDRLQK 132
>03_02_0459 + 8649448-8651994
Length = 848
Score = 27.1 bits (57), Expect = 9.1
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +1
Query: 277 VFAQAMRRRLSAERPSLHNAELSKSLGSMWKNLSEEEKLPFIKEADKLRTQHKKQHPDYK 456
V A M R+ + RP+ A+L+K++ + + SEE K +KEA K+ TQ + +
Sbjct: 469 VRAAEMYTRVLSIRPNHWRAQLNKAVALLGQGESEEAK-KALKEAFKM-TQRVEVYDAIS 526
Query: 457 Y----QPRRRKPP 483
+ Q ++ KPP
Sbjct: 527 HLKTLQKKKPKPP 539
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,638,620
Number of Sequences: 37544
Number of extensions: 361083
Number of successful extensions: 1183
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -