Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312H04f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 276 3e-73
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 252 4e-66
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 230 1e-59
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 214 1e-54
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 186 4e-46
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 179 4e-44
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 171 8e-42
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 129 3e-29
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 127 2e-28
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 119 5e-26
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 94 2e-18
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 94 2e-18
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 81 1e-14
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 74 2e-12
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 70 3e-11
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 61 1e-08
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 57 2e-07
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 42 0.011
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 38 0.18
UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 33 4.0
UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina ... 33 4.0
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 5.2
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_A5UZX2 Cluster: Putative uncharacterized protein precur... 32 6.9
UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:... 32 6.9
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 32 6.9
UniRef50_A0L8H8 Cluster: DNA repair protein RecN; n=2; cellular ... 32 9.2
UniRef50_Q751B7 Cluster: AGL211Cp; n=1; Eremothecium gossypii|Re... 32 9.2
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 32 9.2
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 276 bits (676), Expect = 3e-73
Identities = 125/160 (78%), Positives = 141/160 (88%)
Frame = -3
Query: 516 RGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATP 337
RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP
Sbjct: 49 RGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTP 108
Query: 336 FRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHT 157
+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF
Sbjct: 109 YRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQ 168
Query: 156 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 37
G+LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 252 bits (617), Expect = 4e-66
Identities = 116/161 (72%), Positives = 138/161 (85%), Gaps = 2/161 (1%)
Frame = -3
Query: 519 SRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDAT 340
+RGGNTK RALRL+TGNF+W SE RKTRI DVVYNASNNELVRTKTLVKN+IVV+DAT
Sbjct: 48 TRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDAT 107
Query: 339 PFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALEEQ 166
PFRQWYE+HY LPLGRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE ALE+Q
Sbjct: 108 PFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQ 167
Query: 165 FHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 43
F +GR+LAC++SRPGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 168 FTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 230 bits (563), Expect = 1e-59
Identities = 111/157 (70%), Positives = 128/157 (81%)
Frame = -3
Query: 507 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 328
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 91
Query: 327 WYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRL 148
WYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF G+L
Sbjct: 92 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKL 151
Query: 147 LACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 37
LAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 152 LACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 214 bits (522), Expect = 1e-54
Identities = 104/168 (61%), Positives = 127/168 (75%), Gaps = 8/168 (4%)
Frame = -3
Query: 516 RGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATP 337
RGGN K+RALRLDTGN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+AIV VDA P
Sbjct: 50 RGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAP 109
Query: 336 FRQWYESHYTLPLGRKK--------GAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEG 181
F+QWY +HY + +GRKK A+ E E A K+S RK R+ ++
Sbjct: 110 FKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDP 169
Query: 180 ALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 37
+EEQF +GRLLAC++SRPGQCGRADGYILEGKELEFY++K++ K+ K
Sbjct: 170 HIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 186 bits (452), Expect = 4e-46
Identities = 84/101 (83%), Positives = 91/101 (90%)
Frame = -3
Query: 516 RGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATP 337
RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP
Sbjct: 49 RGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTP 108
Query: 336 FRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 214
+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 109 YRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 179 bits (435), Expect = 4e-44
Identities = 93/158 (58%), Positives = 115/158 (72%)
Frame = -3
Query: 516 RGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATP 337
RGGN K+RALRLD+GNFSWGS+ TRKTR++DVVYNAS+NELVRTKTLVKNAIV VD TP
Sbjct: 49 RGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTP 108
Query: 336 FRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHT 157
F+ W+++HY L LG K +E +A S+K A A V L +QF +
Sbjct: 109 FKLWFKTHYGLELG-----KSSEDPQA------SEKVA---------ALVPRTLLDQFSS 148
Query: 156 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 43
GRLLAC++SRPGQCGR DGY+LEG+EL FY R++ K+
Sbjct: 149 GRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 186
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 171 bits (416), Expect = 8e-42
Identities = 89/172 (51%), Positives = 115/172 (66%), Gaps = 13/172 (7%)
Frame = -3
Query: 519 SRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDAT 340
+RGGN K RALRLDTGNF+W SE + R++DVVYNA++NELVRTKTLVKN IV VDA
Sbjct: 48 ARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAA 107
Query: 339 PFRQWYESHYTLPL-GRKKGAKLTEAEE--------AIINK----KRSQKTARKYLARQR 199
PF++WY HY + L KK K A E A +K K S K R++ R+R
Sbjct: 108 PFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWTRRRR 167
Query: 198 LAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 43
+VE A+ +Q GR+LA + SRPGQ GRADG +LEG EL+FYL++++ K+
Sbjct: 168 NHRVEKAIADQLREGRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 129 bits (312), Expect = 3e-29
Identities = 78/188 (41%), Positives = 110/188 (58%), Gaps = 30/188 (15%)
Frame = -3
Query: 516 RGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATP 337
R G K RALRL+ GNFSW S+ T+ T+I++VVYNAS+N+ VRT TLVK AI+ +D P
Sbjct: 49 RYGIIKRRALRLENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVKGAIIEIDPAP 108
Query: 336 FRQWYESHYTLPLGRKKGAKLTEA-----EEAII------NKKRS--------------- 235
FR W+ Y + K E+ E+ ++ NK+++
Sbjct: 109 FRLWFLKFYGKDIASTDYYKSLESATFKTEKKVVVPKEEENKEKTIAQQIAETQVALMNP 168
Query: 234 QKTARKYLARQ----RLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFY 67
KT +K A++ + K + AL E F +GR+LAC++SRPGQ G +GYILEGKEL+FY
Sbjct: 169 SKTMQKKYAKKLEVLKNMKFDEALLEGFQSGRVLACISSRPGQTGSVEGYILEGKELDFY 228
Query: 66 LRKIKSKR 43
+KI K+
Sbjct: 229 SKKISDKK 236
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 127 bits (306), Expect = 2e-28
Identities = 57/86 (66%), Positives = 71/86 (82%)
Frame = -3
Query: 516 RGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATP 337
RGGNTK+RALR DT N+SWGSE TRKTRI+DVVY A+NNELVRT+TLVK+AIV VDA P
Sbjct: 147 RGGNTKWRALRFDTCNYSWGSEALTRKTRILDVVYIATNNELVRTQTLVKSAIVQVDAAP 206
Query: 336 FRQWYESHYTLPLGRKKGAKLTEAEE 259
F+QWY +HY + +GRKK + + ++
Sbjct: 207 FKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 119 bits (286), Expect = 5e-26
Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 9/120 (7%)
Frame = -3
Query: 369 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 211
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 210 ARQRL--AKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 37
RQ L A VE +L+E+F TGRLLAC++S+PGQ GRADGY+ EGKELEF+ +K+K+K+AK
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 94.3 bits (224), Expect = 2e-18
Identities = 46/86 (53%), Positives = 55/86 (63%)
Frame = -3
Query: 294 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQC 115
R+ + T EE ++NKKRS+KT +KY R AC+ASRPGQC
Sbjct: 64 RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQC 123
Query: 114 GRADGYILEGKELEFYLRKIKSKRAK 37
GRADGYILEGKELEFYLRKIK+K+ K
Sbjct: 124 GRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 93.9 bits (223), Expect = 2e-18
Identities = 65/157 (41%), Positives = 86/157 (54%)
Frame = -3
Query: 516 RGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATP 337
RGG K RAL L GNFS+ S T K +I+ V +N S+NELVRT TL K +IV +D
Sbjct: 49 RGGGVKTRALFLSYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTKGSIVYLDIAK 108
Query: 336 FRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHT 157
+ TL K+ AE+ I NK L +Q +
Sbjct: 109 TL----IYNTLIRNLNSNPKI--AEDTISNK---------------------ILIDQILS 141
Query: 156 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 46
G++LA + SRPGQ GRADGYILEG+EL+++L+KI+ K
Sbjct: 142 GKILARICSRPGQSGRADGYILEGQELDYFLKKIQKK 178
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 81.4 bits (192), Expect = 1e-14
Identities = 36/62 (58%), Positives = 47/62 (75%)
Frame = -3
Query: 516 RGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATP 337
RGGN K RALRL G+F+WGS + K RI+ VVYN+++NELVRT TLVK +V +D+ P
Sbjct: 58 RGGNIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTLVKGCVVQIDSAP 117
Query: 336 FR 331
F+
Sbjct: 118 FK 119
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = -3
Query: 171 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 46
+Q +LA ++SRPGQ G ADGYILEG EL FY +K+ K
Sbjct: 133 DQIRGDHILARISSRPGQVGTADGYILEGPELLFYQKKLAPK 174
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 73.7 bits (173), Expect = 2e-12
Identities = 41/82 (50%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = -3
Query: 294 RKKGAKLTEAEEAIINKKRSQKTARKYLAR-QRLAKVEGALEEQFHTGRLLACVASRPGQ 118
R + + E I K R +K AR KVE ALE+QF GRL A V+SRPGQ
Sbjct: 59 RLESGNFSWGSEGIARKVRVIVVEKKQAARFAAQGKVEPALEKQFEAGRLYAVVSSRPGQ 118
Query: 117 CGRADGYILEGKELEFYLRKIK 52
GR DGYILEG+EL FY R I+
Sbjct: 119 SGRVDGYILEGEELAFYQRAIR 140
Score = 51.6 bits (118), Expect = 1e-05
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -3
Query: 519 SRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 418
+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 48 TRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 70.1 bits (164), Expect = 3e-11
Identities = 31/62 (50%), Positives = 45/62 (72%)
Frame = -3
Query: 516 RGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATP 337
RGGN KY+ALRLD G+F + + R +++ VVY+ S+NELVRT TL K+++V + A P
Sbjct: 49 RGGNRKYKALRLDMGHFKFITTGKFRMAKLLQVVYHPSSNELVRTNTLTKSSVVKISAEP 108
Query: 336 FR 331
F+
Sbjct: 109 FK 110
Score = 52.8 bits (121), Expect = 5e-06
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = -3
Query: 189 VEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 46
V+ +L E F G L A + SRPGQ G A G++L+G EL+FY K K
Sbjct: 120 VDPSLHESFEKGHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 61.3 bits (142), Expect = 1e-08
Identities = 39/92 (42%), Positives = 54/92 (58%)
Frame = -3
Query: 396 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 217
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 216 YLARQRLAKVEGALEEQFHTGRLLACVASRPG 121
RQ+ K++ +EEQF +GRLLA ++S PG
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSGRLLAAISSYPG 110
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 57.2 bits (132), Expect = 2e-07
Identities = 23/61 (37%), Positives = 41/61 (67%)
Frame = -3
Query: 516 RGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATP 337
RGGN K++A+ L G+F W + ++ ++I+ V+YN +N +LV+ + L K I+ +D+ P
Sbjct: 43 RGGNFKFKAISLGKGSFQWKTMQLSKNSKILSVLYNQANLKLVQKRNLSKGTIIKIDSMP 102
Query: 336 F 334
F
Sbjct: 103 F 103
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 41.5 bits (93), Expect = 0.011
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = -3
Query: 513 GGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 355
GGN K RALRL+ S + T+KT+I V N+++ VR K L K AI+
Sbjct: 48 GGNQKVRALRLEYATVSNPATGETKKTKIEAVEANSADPNYVRRKLLTKGAII 100
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 37.5 bits (83), Expect = 0.18
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = -3
Query: 456 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 292
SE ST+ T ++ + AS EL KTL K A+ ++D PF W + L R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233
Query: 291 KKGAKLTEAEEAIINKKRS 235
G L A+E +INK+ +
Sbjct: 234 MSGDLLNYAQE-LINKQNT 251
>UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 738
Score = 33.9 bits (74), Expect = 2.3
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = -3
Query: 294 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRP 124
+K+G K E I + RK RQ+ K++ +EEQF +GRLLA ++S P
Sbjct: 273 KKEGEKGDGPVEEI---NKGNHVVRKLEKRQQDHKLDPHIEEQFGSGRLLAAISSYP 326
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 33.1 bits (72), Expect = 4.0
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 273 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 163
T EE I+NKK S+K +KY ++ AK+ L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141
>UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 90
Score = 33.1 bits (72), Expect = 4.0
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 324 YESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA-RKYLARQRLAKVEGALEE 169
Y + +TL R + A EA E ++ K +K A K LA+ L K+EG LEE
Sbjct: 31 YRNIWTLNGSRNRSATSKEACEKLLAKNCLRKIACEKLLAKNCLRKIEGLLEE 83
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 5.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 360 IVVVDATPFRQWYESHYTLPLGRKK 286
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 5.2
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -3
Query: 345 ATPFRQWYESHYTLPLGRKKGAKLTEAE 262
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
>UniRef50_A5UZX2 Cluster: Putative uncharacterized protein
precursor; n=2; Roseiflexus|Rep: Putative
uncharacterized protein precursor - Roseiflexus sp. RS-1
Length = 953
Score = 32.3 bits (70), Expect = 6.9
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 177 LEEQFHTGRL-LACVASRPGQCGRADGYILEGKELEFYLR 61
LE QF L + V + PGQ GR+D Y + G EL FYLR
Sbjct: 841 LEWQFPMAILEVRLVGAEPGQEGRSDDYQVSG-ELRFYLR 879
>UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:
PV1H14180_P - Plasmodium vivax
Length = 1011
Score = 32.3 bits (70), Expect = 6.9
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = -3
Query: 288 KGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEG 181
+G KL EAE+ ++ +++S+ A K L ++ + ++EG
Sbjct: 586 EGGKLMEAEKKLLEEEKSRVDAEKKLMQEEMTRIEG 621
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 32.3 bits (70), Expect = 6.9
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 392 NSLLDALYTTSMIRVLRVEHSDPQEKLPVS 481
N L D +Y T I +R EH DP++ LP S
Sbjct: 309 NLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
>UniRef50_A0L8H8 Cluster: DNA repair protein RecN; n=2; cellular
organisms|Rep: DNA repair protein RecN - Magnetococcus
sp. (strain MC-1)
Length = 560
Score = 31.9 bits (69), Expect = 9.2
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -3
Query: 342 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 163
T +R WYESH L R+KG E + + +TA Y ++ ++E
Sbjct: 162 TLYRSWYESHKALEQLREKGRDAAERRAFLSFQLEELETAGVYPGEEQ--ELEHQRTRLA 219
Query: 162 HTGRL 148
H GRL
Sbjct: 220 HAGRL 224
>UniRef50_Q751B7 Cluster: AGL211Cp; n=1; Eremothecium gossypii|Rep:
AGL211Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 612
Score = 31.9 bits (69), Expect = 9.2
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = -3
Query: 336 FRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHT 157
F W +SH +PL R++ ++ E NK+R +K + L R + + ALE +
Sbjct: 512 FTNWEDSHIGVPLSREEVTEINTKEVEAANKER-EKAVEEELQEAR-ERQKQALEAKRGP 569
Query: 156 GRLL 145
G++L
Sbjct: 570 GKIL 573
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 31.9 bits (69), Expect = 9.2
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -3
Query: 519 SRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 355
S GGN+K+ LR D N + +TRK +I V N+++ V+ + + ++
Sbjct: 47 SYGGNSKFALLRCDYANVYNPKDKTTRKVKINTVKENSADPHYVQRNIMNRGTVI 101
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,762,159
Number of Sequences: 1657284
Number of extensions: 7888090
Number of successful extensions: 24487
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24470
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -