Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312H01f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical pr... 40 8e-04
Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical pr... 40 8e-04
Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical pr... 40 0.001
U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein. 40 0.001
AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin prote... 36 0.023
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 35 0.041
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 35 0.041
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 35 0.041
AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin prote... 34 0.054
Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical pr... 29 2.7
U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane p... 29 2.7
AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin prote... 29 2.7
Z82086-2|CAB04995.2| 309|Caenorhabditis elegans Hypothetical pr... 28 3.5
U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein... 27 6.2
U37429-7|AAA79351.2| 218|Caenorhabditis elegans Hypothetical pr... 27 6.2
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF040646-3|AAK31541.1| 946|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical
protein F07A5.1b protein.
Length = 434
Score = 40.3 bits (90), Expect = 8e-04
Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Frame = +3
Query: 84 DWSEFRRKELVSYFNYTNMYTHNMYALRYAFCELLNLVNVVGQIFILDLFLGGSFRNYGA 263
D +FRR + Y ++ + ++ Y+ +L + NV+ Q+ ++ FL +G
Sbjct: 168 DHFKFRRAHKMGYLSWIT-FNSAFPSVLYSLTKLFFITNVIIQVNLVCKFLDVDSWTWGF 226
Query: 264 -AVAAFTH-TPRIPNDFTNFTSVNPMD-----------EFFPKLTKCWLRNYGPSGSLEL 404
+ F H TPR P +F++F+ ++FP L C + +
Sbjct: 227 DLLGKFIHPTPRAP-EFSSFSDKQRFAAILTDGSYNRFQYFPILVGCEYQLQESVSNFVN 285
Query: 405 KDRLCVLPLNIVNEKXXXXXXXXXXXXTAFSILAVV 512
C++P+N++NEK TA S++ V
Sbjct: 286 HKAQCIIPMNVINEKIFIGLYFWLLVLTALSVIGTV 321
>Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical
protein F07A5.1a protein.
Length = 432
Score = 40.3 bits (90), Expect = 8e-04
Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Frame = +3
Query: 84 DWSEFRRKELVSYFNYTNMYTHNMYALRYAFCELLNLVNVVGQIFILDLFLGGSFRNYGA 263
D +FRR + Y ++ + ++ Y+ +L + NV+ Q+ ++ FL +G
Sbjct: 168 DHFKFRRAHKMGYLSWIT-FNSAFPSVLYSLTKLFFITNVIIQVNLVCKFLDVDSWTWGF 226
Query: 264 -AVAAFTH-TPRIPNDFTNFTSVNPMD-----------EFFPKLTKCWLRNYGPSGSLEL 404
+ F H TPR P +F++F+ ++FP L C + +
Sbjct: 227 DLLGKFIHPTPRAP-EFSSFSDKQRFAAILTDGSYNRFQYFPILVGCEYQLQESVSNFVN 285
Query: 405 KDRLCVLPLNIVNEKXXXXXXXXXXXXTAFSILAVV 512
C++P+N++NEK TA S++ V
Sbjct: 286 HKAQCIIPMNVINEKIFIGLYFWLLVLTALSVIGTV 321
>Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical
protein R12H7.1 protein.
Length = 386
Score = 39.9 bits (89), Expect = 0.001
Identities = 31/94 (32%), Positives = 43/94 (45%)
Frame = +3
Query: 168 YAFCELLNLVNVVGQIFILDLFLGGSFRNYGAAVAAFTHTPRIPNDFTNFTSVNPMDEFF 347
Y ++L VN+VGQIF+L+ FLG + YG V ND N F
Sbjct: 199 YISVKILYTVNIVGQIFLLNTFLGNRSKWYGLQVL---------NDLMNGREWEESGH-F 248
Query: 348 PKLTKCWLRNYGPSGSLELKDRLCVLPLNIVNEK 449
P++T C G++ CVL +N+ NEK
Sbjct: 249 PRVTLCDF-EVKVLGNVHRHTVQCVLMINMFNEK 281
>U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein.
Length = 386
Score = 39.9 bits (89), Expect = 0.001
Identities = 31/94 (32%), Positives = 43/94 (45%)
Frame = +3
Query: 168 YAFCELLNLVNVVGQIFILDLFLGGSFRNYGAAVAAFTHTPRIPNDFTNFTSVNPMDEFF 347
Y ++L VN+VGQIF+L+ FLG + YG V ND N F
Sbjct: 199 YISVKILYTVNIVGQIFLLNTFLGNRSKWYGLQVL---------NDLMNGREWEESGH-F 248
Query: 348 PKLTKCWLRNYGPSGSLELKDRLCVLPLNIVNEK 449
P++T C G++ CVL +N+ NEK
Sbjct: 249 PRVTLCDF-EVKVLGNVHRHTVQCVLMINMFNEK 281
>AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin protein
15 protein.
Length = 382
Score = 35.5 bits (78), Expect = 0.023
Identities = 27/105 (25%), Positives = 48/105 (45%)
Frame = +3
Query: 135 NMYTHNMYALRYAFCELLNLVNVVGQIFILDLFLGGSFRNYGAAVAAFTHTPRIPNDFTN 314
N+ N + Y + L LVN++ Q+F++ FLG ++ + F +N
Sbjct: 178 NIIGRNWVSFNYILTKFLFLVNLIAQMFLIHFFLGFDLDDFISLRVGFG---------SN 228
Query: 315 FTSVNPMDEFFPKLTKCWLRNYGPSGSLELKDRLCVLPLNIVNEK 449
+ + + FP+ T C GS++ CVL +N++NEK
Sbjct: 229 WIA----NGIFPRQTMCDF-EIRKKGSIQKYSVQCVLSMNMLNEK 268
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 34.7 bits (76), Expect = 0.041
Identities = 32/100 (32%), Positives = 44/100 (44%)
Frame = +3
Query: 150 NMYALRYAFCELLNLVNVVGQIFILDLFLGGSFRNYGAAVAAFTHTPRIPNDFTNFTSVN 329
N L Y F ++L L NVV Q+F+L+ FLG YG I D N
Sbjct: 186 NYVTLLYVFIKMLYLGNVVLQVFMLNSFLGTDNLFYGF---------HILRDLLNGREWE 236
Query: 330 PMDEFFPKLTKCWLRNYGPSGSLELKDRLCVLPLNIVNEK 449
+ FP++T C G++ CVL +N+ NEK
Sbjct: 237 -VSGNFPRVTMCDF-EVRVLGNVHHHTVQCVLMINMFNEK 274
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 34.7 bits (76), Expect = 0.041
Identities = 32/100 (32%), Positives = 44/100 (44%)
Frame = +3
Query: 150 NMYALRYAFCELLNLVNVVGQIFILDLFLGGSFRNYGAAVAAFTHTPRIPNDFTNFTSVN 329
N L Y F ++L L NVV Q+F+L+ FLG YG I D N
Sbjct: 186 NYVTLLYVFIKMLYLGNVVLQVFMLNSFLGTDNLFYGF---------HILRDLLNGREWE 236
Query: 330 PMDEFFPKLTKCWLRNYGPSGSLELKDRLCVLPLNIVNEK 449
+ FP++T C G++ CVL +N+ NEK
Sbjct: 237 -VSGNFPRVTMCDF-EVRVLGNVHHHTVQCVLMINMFNEK 274
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 34.7 bits (76), Expect = 0.041
Identities = 32/100 (32%), Positives = 44/100 (44%)
Frame = +3
Query: 150 NMYALRYAFCELLNLVNVVGQIFILDLFLGGSFRNYGAAVAAFTHTPRIPNDFTNFTSVN 329
N L Y F ++L L NVV Q+F+L+ FLG YG I D N
Sbjct: 186 NYVTLLYVFIKMLYLGNVVLQVFMLNSFLGTDNLFYGF---------HILRDLLNGREWE 236
Query: 330 PMDEFFPKLTKCWLRNYGPSGSLELKDRLCVLPLNIVNEK 449
+ FP++T C G++ CVL +N+ NEK
Sbjct: 237 -VSGNFPRVTMCDF-EVRVLGNVHHHTVQCVLMINMFNEK 274
>AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin protein
13 protein.
Length = 385
Score = 34.3 bits (75), Expect = 0.054
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Frame = +3
Query: 120 YFNYTNMYTHNMYALRYA--FCELLNLVNVVGQIFILDLFLGGSFRNYGAAVAAFTHTPR 293
+ YT+ +T+ L Y F + L LV +V Q IL+ FLG S+ +G +
Sbjct: 169 FAKYTSAFTYGGSYLTYLYLFVKFLYLVQIVFQFIILNNFLGTSYTFWGLGIL------- 221
Query: 294 IPNDFTNFTSVNPMDEFFPKLTKCWLRNYGPSGSLELKDRLCVLPLNIVNEK 449
+D N FP++T C G+ CVL +N+ NEK
Sbjct: 222 --SDILNGREWEESGH-FPRVTMCDF-EVRVLGNKHRHTVQCVLMINMFNEK 269
>Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.2 protein.
Length = 382
Score = 33.1 bits (72), Expect = 0.12
Identities = 33/123 (26%), Positives = 56/123 (45%)
Frame = +3
Query: 81 KDWSEFRRKELVSYFNYTNMYTHNMYALRYAFCELLNLVNVVGQIFILDLFLGGSFRNYG 260
K+ + F R ++ S + MY + Y+ ++L LVN + Q I+ +FLG RN
Sbjct: 157 KEMARFMRTKITSVHTPSLFSFIRMYMV-YSVIKILYLVNAIAQFVIIAIFLGQK-RNLF 214
Query: 261 AAVAAFTHTPRIPNDFTNFTSVNPMDEFFPKLTKCWLRNYGPSGSLELKDRLCVLPLNIV 440
F + + N T T+ FP++T C + +G+ + CV+ +N
Sbjct: 215 WGWTLFMN---LLNGITWETT-----GLFPRVTFCDFQVREMAGNNRDETVECVIGINEF 266
Query: 441 NEK 449
NEK
Sbjct: 267 NEK 269
>Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical
protein W04D2.3 protein.
Length = 465
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 114 VSYFNYTNMYTHNMYALRYAFCELLNLVNVVGQIFILDLFLGGSFRN-YGAAV 269
V++ N+ Y+ + Y F ++L +NV Q+++++ FLG + + YG V
Sbjct: 186 VTFLNF--QYSSGFISWIYLFTKVLYFLNVFAQLYLMNYFLGTNRHHWYGFGV 236
>Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical
protein C36H8.2 protein.
Length = 389
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 345 FPKLTKCWLRNYGPSGSLELKDRLCVLPLNIVNEK 449
FP++ C P+ S++L LCVL LNI EK
Sbjct: 242 FPRIVHCDFNRRRPA-SVQLDTVLCVLTLNIYYEK 275
>U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane
protein protein.
Length = 363
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 345 FPKLTKCWLRNYGPSGSLELKDRLCVLPLNIVNEK 449
FP++ C P+ S++L LCVL LNI EK
Sbjct: 216 FPRIVHCDFNRRRPA-SVQLDTVLCVLTLNIYYEK 249
>AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin protein
16 protein.
Length = 372
Score = 28.7 bits (61), Expect = 2.7
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +3
Query: 168 YAFCELLNLVNVVGQIFILDLFLGGSFRNYGAAVAAFTHTPRIPNDFTNFTSVNPMDE-- 341
Y +LL L+N+V Q F+L+ FL ++ +G + F + + E
Sbjct: 180 YLVMKLLILLNIVLQFFLLNSFLNTAYTFWGWGI------------FWDMVNGRHWQESG 227
Query: 342 FFPKLTKCWLRNYGPSGSLELKDRLCVLPLNIVNEK 449
FP+++ C + N G++ CVL +N+ NEK
Sbjct: 228 HFPRVSFCDI-NVRELGNIHHWSLQCVLMVNMFNEK 262
>Z82086-2|CAB04995.2| 309|Caenorhabditis elegans Hypothetical
protein ZK228.3 protein.
Length = 309
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 27 EGGRLKALAADLSSPMVSKDWSEFRRKELVSY 122
E G+++ ++ADL+ V+KDW E +L +Y
Sbjct: 141 EPGKMR-ISADLTEKYVTKDWKEVGEAQLEAY 171
>U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein 12
protein.
Length = 408
Score = 27.5 bits (58), Expect = 6.2
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Frame = +3
Query: 168 YAFCELLNLVNVVGQIFILDLFLGGSFRNYGAAVAAFTHTPRIPNDFTNFTSVNPMDEFF 347
Y F + L L+NV+ Q +L LG +GA V + + N++ P F
Sbjct: 201 YLFMKALFLINVLFQFVLLKRMLGVDSYFWGAEVTSDLWS---GNEW-------PETGNF 250
Query: 348 PKLTKC--WLRNYGPSGSLELKDRLCVLPLNIVNEKXXXXXXXXXXXXTAFSILAVVFRF 521
P++T C +RN ++ CVL +N+ NEK T +I ++ F
Sbjct: 251 PRVTMCEYEVRNL---DNIHKHSVQCVLMINMFNEKIFVALWWWLCFLTVVTITNTIYWF 307
>U37429-7|AAA79351.2| 218|Caenorhabditis elegans Hypothetical
protein F09E5.11 protein.
Length = 218
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 66 SPMVSKDWSEFRRKELVSYFNYTNMYT 146
+P VSK EF +K++VSY + N+ T
Sbjct: 26 TPEVSKSCKEFYKKDVVSYKDLVNIKT 52
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
C13F10.4 protein.
Length = 2076
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +1
Query: 235 LVVHSVTMVLQLQLLRTPHAYLTILP 312
LV+ S+ +++Q+ L +PH+ +T+LP
Sbjct: 1742 LVIKSMQILVQIPSLCSPHSRVTVLP 1767
>AF040646-3|AAK31541.1| 946|Caenorhabditis elegans Hypothetical
protein H17B01.4a protein.
Length = 946
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 6 RYLWKMWEGGRLKALAADLSS---PM-VSKDWSEFRRKELVSYFNYTNMYTHN 152
RYLWK+W G + L + P+ V + + ++ L S ++N THN
Sbjct: 505 RYLWKLWLGEHFQPLESPFDGEKVPLFVQRTTAHYQLDGLASVV-FSNKLTHN 556
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,493,382
Number of Sequences: 27780
Number of extensions: 268039
Number of successful extensions: 652
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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