Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312G06f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 335 1e-92
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 335 1e-92
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 282 1e-76
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 222 2e-70
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 203 7e-53
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 203 7e-53
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 190 7e-49
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 114 3e-26
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 87 7e-18
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 87 7e-18
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 85 4e-17
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 85 4e-17
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 85 4e-17
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 53 1e-07
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 7e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 42 2e-04
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 39 0.002
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 38 0.003
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.006
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.094
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.094
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.094
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.16
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.16
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.22
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.5
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 2.7
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 4.7
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 335 bits (823), Expect = 1e-92
Identities = 157/172 (91%), Positives = 162/172 (94%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI
Sbjct: 14 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 73
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 365
DIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQT
Sbjct: 74 DIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQT 133
Query: 366 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYXP 521
REHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGY P
Sbjct: 134 REHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNP 185
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 335 bits (823), Expect = 1e-92
Identities = 157/172 (91%), Positives = 162/172 (94%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI
Sbjct: 14 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 73
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 365
DIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQT
Sbjct: 74 DIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQT 133
Query: 366 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYXP 521
REHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGY P
Sbjct: 134 REHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNP 185
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 282 bits (691), Expect = 1e-76
Identities = 136/159 (85%), Positives = 143/159 (89%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI
Sbjct: 14 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 73
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 365
DIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQT
Sbjct: 74 DIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQT 133
Query: 366 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 482
REHALLA TLGVKQL V+ T P S R + I++
Sbjct: 134 REHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 222 bits (542), Expect(2) = 2e-70
Identities = 101/104 (97%), Positives = 104/104 (100%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI
Sbjct: 14 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 73
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 317
DIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 74 DIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 61.3 bits (142), Expect(2) = 2e-70
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +3
Query: 408 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYXP 521
L+V NKMDSTEPP+SE RF EI EVS +IKKIGY P
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNP 151
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 203 bits (495), Expect = 7e-53
Identities = 95/167 (56%), Positives = 123/167 (73%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+
Sbjct: 177 GHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTM 236
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 365
DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT
Sbjct: 237 DIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQT 296
Query: 366 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 506
+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ +
Sbjct: 297 KEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTR 341
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 203 bits (495), Expect = 7e-53
Identities = 95/167 (56%), Positives = 123/167 (73%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+
Sbjct: 195 GHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTM 254
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 365
DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT
Sbjct: 255 DIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQT 314
Query: 366 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 506
+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ +
Sbjct: 315 KEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTR 359
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 190 bits (462), Expect = 7e-49
Identities = 83/172 (48%), Positives = 123/172 (71%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D ERE+G T+
Sbjct: 116 GHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTV 175
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 365
++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQT
Sbjct: 176 EVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQT 235
Query: 366 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYXP 521
REH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+ P
Sbjct: 236 REHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNP 287
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 114 bits (275), Expect = 3e-26
Identities = 51/54 (94%), Positives = 52/54 (96%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 167
GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 14 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 87.0 bits (206), Expect = 7e-18
Identities = 47/100 (47%), Positives = 63/100 (63%)
Frame = +3
Query: 144 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 323
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 324 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 443
G E QT+EH +LA +GVK + + +NK D E
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 87.0 bits (206), Expect = 7e-18
Identities = 47/100 (47%), Positives = 63/100 (63%)
Frame = +3
Query: 144 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 323
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 324 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 443
G E QT+EH +LA +GVK + + +NK D E
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 84.6 bits (200), Expect = 4e-17
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +3
Query: 144 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 323
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 324 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 497
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 147 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 196
Query: 498 IKKIGY 515
+ + GY
Sbjct: 197 LNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 84.6 bits (200), Expect = 4e-17
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +3
Query: 144 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 323
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 324 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 497
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 498 IKKIGY 515
+ + GY
Sbjct: 198 LNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 84.6 bits (200), Expect = 4e-17
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +3
Query: 144 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 323
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 324 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 497
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 498 IKKIGY 515
+ + GY
Sbjct: 198 LNEFGY 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 56.0 bits (129), Expect = 2e-08
Identities = 46/142 (32%), Positives = 64/142 (45%)
Frame = +3
Query: 9 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 188
HVD GKST L+ CG + +K+ +LDKL+ ERERGIT+
Sbjct: 50 HVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERERGITVK 91
Query: 189 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 368
Y + +ID PGH DF + + D +L+VAA G QT
Sbjct: 92 AQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTI 144
Query: 369 EHALLAFTLGVKQLIVGVNKMD 434
+ LAF + Q+I +NK+D
Sbjct: 145 ANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 52.8 bits (121), Expect = 1e-07
Identities = 45/142 (31%), Positives = 62/142 (43%)
Frame = +3
Query: 9 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 188
H+DSGK+T T ++Y G ID E+ +G +D + ER+RGITI
Sbjct: 52 HIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQRGITIQ 101
Query: 189 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 368
A + + IID PGH DF + D AVL++ G G G+ T
Sbjct: 102 SAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQSQTFTV 156
Query: 369 EHALLAFTLGVKQLIVGVNKMD 434
L + + I VNKMD
Sbjct: 157 NRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 50.0 bits (114), Expect = 1e-06
Identities = 35/107 (32%), Positives = 49/107 (45%)
Frame = +3
Query: 9 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 188
HVD+GK+T T L+Y G I A + KG+ V D L ERERGIT+
Sbjct: 33 HVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERERGITVQ 79
Query: 189 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 329
A + + + +ID PGH DF + D V+++ G
Sbjct: 80 SAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect = 7e-05
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +3
Query: 114 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 290
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 291 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 434
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/96 (30%), Positives = 49/96 (51%)
Frame = +3
Query: 225 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 404
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 405 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 512
++I+ +NK D E + + E K+V +K +G
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMG 158
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 38.7 bits (86), Expect = 0.002
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Frame = +3
Query: 9 HVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWVLDKLKA 161
HVD GKST T L+ K G I K +F K+ QE + + + L+K
Sbjct: 27 HVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFELEKKDL 86
Query: 162 ERERGI----TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 329
E +G T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 87 EFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 38.3 bits (85), Expect = 0.003
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Frame = +3
Query: 9 HVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWVLDKLKA 161
HVD GKST T L+ K G I K +F K+ QE + + + L+K
Sbjct: 27 HVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFELEKKDL 86
Query: 162 ERERGI----TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 329
E +G T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 87 EFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 222 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 401
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 402 KQLIVGVNKMDSTEPPYSEPRFEEI 476
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.094
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 144 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 314
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.094
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 144 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 314
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.094
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 427 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 299
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.16
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 147 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 311
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 312 VAAGTG 329
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.16
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 147 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 311
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 312 VAAGTG 329
V A G
Sbjct: 107 VDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.22
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +3
Query: 231 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 410
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 411 IVGVNKMDSTEPPYSEPR 464
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 69 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 170
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 69 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 170
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 2.7
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 410 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 252
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 251 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 132
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 225 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 320
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,329,448
Number of Sequences: 27780
Number of extensions: 256380
Number of successful extensions: 799
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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