Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312G06f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 303 3e-83
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 303 3e-83
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 303 3e-83
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 303 3e-83
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 178 2e-45
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 170 4e-43
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 90 1e-18
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 86 1e-17
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 53 1e-07
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 53 1e-07
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 48 4e-06
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 46 1e-05
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 46 2e-05
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 43 1e-04
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 42 3e-04
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 42 3e-04
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 40 8e-04
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 40 8e-04
At5g13650.2 68418.m01585 elongation factor family protein contai... 38 0.003
At5g13650.1 68418.m01584 elongation factor family protein contai... 38 0.003
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 36 0.017
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 36 0.017
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 34 0.050
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 34 0.067
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 31 0.62
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 0.82
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 0.82
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.1
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.1
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 1.4
At5g19470.1 68418.m02320 MutT/nudix family protein similar to SP... 28 4.4
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 4.4
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 27 7.7
At4g20430.1 68417.m02981 subtilase family protein contains Pfam ... 27 7.7
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 303 bits (745), Expect = 3e-83
Identities = 142/172 (82%), Positives = 155/172 (90%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITI
Sbjct: 14 GHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITI 73
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 365
DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQT
Sbjct: 74 DIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQT 133
Query: 366 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYXP 521
REHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GY P
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 303 bits (745), Expect = 3e-83
Identities = 142/172 (82%), Positives = 155/172 (90%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITI
Sbjct: 14 GHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITI 73
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 365
DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQT
Sbjct: 74 DIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQT 133
Query: 366 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYXP 521
REHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GY P
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 303 bits (745), Expect = 3e-83
Identities = 142/172 (82%), Positives = 155/172 (90%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITI
Sbjct: 14 GHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITI 73
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 365
DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQT
Sbjct: 74 DIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQT 133
Query: 366 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYXP 521
REHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GY P
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 303 bits (745), Expect = 3e-83
Identities = 142/172 (82%), Positives = 155/172 (90%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITI
Sbjct: 14 GHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITI 73
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 365
DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQT
Sbjct: 74 DIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQT 133
Query: 366 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYXP 521
REHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GY P
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNP 185
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 178 bits (433), Expect = 2e-45
Identities = 83/167 (49%), Positives = 118/167 (70%), Gaps = 1/167 (0%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+ ERERGIT+
Sbjct: 246 GHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEERERGITM 305
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQ 362
+A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG GQ
Sbjct: 306 TVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQ 365
Query: 363 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 503
TREHA + GV+Q+IV +NKMD YS+ RF+ IK+ V S+++
Sbjct: 366 TREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFLQ 410
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 170 bits (414), Expect = 4e-43
Identities = 78/170 (45%), Positives = 117/170 (68%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D + ER +G T+
Sbjct: 108 GHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTV 167
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 365
++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQT
Sbjct: 168 EVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQT 227
Query: 366 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 515
REH LA TLGV +LIV VNKMD +S+ R++EI++++ ++K GY
Sbjct: 228 REHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGY 277
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 89.8 bits (213), Expect = 1e-18
Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 1/165 (0%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVD GK+T T L I +K+++ +D ER RGITI
Sbjct: 86 GHVDHGKTTLTAALTMALASIGSSVAKKYDE---------------IDAAPEERARGITI 130
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 365
+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G QT
Sbjct: 131 NTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QT 183
Query: 366 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE-EIKKEVSSY 497
+EH LLA +GV ++V +NK D + E E+++ +SSY
Sbjct: 184 KEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSY 228
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 86.2 bits (204), Expect = 1e-17
Identities = 58/166 (34%), Positives = 83/166 (50%)
Frame = +3
Query: 6 GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 185
GHVD GK+T T + K E GK +DK E++RGITI
Sbjct: 74 GHVDHGKTTLTAAIT---------------KVLAEEGKAKAIAFDEIDKAPEEKKRGITI 118
Query: 186 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 365
A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G QT
Sbjct: 119 ATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QT 171
Query: 366 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 503
+EH LLA +GV L+ +NK+D + P E +E+ S+ K
Sbjct: 172 KEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYK 217
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 53.2 bits (122), Expect = 1e-07
Identities = 39/122 (31%), Positives = 58/122 (47%)
Frame = +3
Query: 9 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 188
H+DSGK+T T +++ G I E E ++ G G+ +D + ERE+GITI
Sbjct: 73 HIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLEREKGITIQ 122
Query: 189 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 368
A Y V IID PGH DF + D A+L++ + G I+ + Q R
Sbjct: 123 SAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMR 182
Query: 369 EH 374
+
Sbjct: 183 RY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 53.2 bits (122), Expect = 1e-07
Identities = 39/122 (31%), Positives = 58/122 (47%)
Frame = +3
Query: 9 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 188
H+DSGK+T T +++ G I E E ++ G G+ +D + ERE+GITI
Sbjct: 73 HIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLEREKGITIQ 122
Query: 189 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 368
A Y V IID PGH DF + D A+L++ + G I+ + Q R
Sbjct: 123 SAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMR 182
Query: 369 EH 374
+
Sbjct: 183 RY 184
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 48.0 bits (109), Expect = 4e-06
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
Frame = +3
Query: 9 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 188
H+D GKST L+ G + R + K F LD + ERERGITI
Sbjct: 94 HIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERERGITIK 137
Query: 189 IAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 356
+ + +E + + + +ID PGH DF + + + A+L+V A G EA
Sbjct: 138 LQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VEA----- 191
Query: 357 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 500
QT + LA + ++I +NK+D P +EP E++ +E+ I
Sbjct: 192 -QTLANVYLALENNL-EIIPVLNKIDL---PGAEP--EKVLREIEEVI 232
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 46.4 bits (105), Expect = 1e-05
Identities = 34/107 (31%), Positives = 49/107 (45%)
Frame = +3
Query: 9 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 188
HVD GK+T HLI GG + GK F +D L E+ R IT+
Sbjct: 17 HVDHGKTTLADHLIASSGG--------GVLHPRLAGKLRF-----MDYLDEEQRRAITMK 63
Query: 189 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 329
+ + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 64 SSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/107 (29%), Positives = 50/107 (46%)
Frame = +3
Query: 9 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 188
H+D+GK+TTT ++Y G + E+ +G+ W ++ E+ERGITI
Sbjct: 104 HIDAGKTTTTERILYYTGR---------NYKIGEVHEGTATMDW----MEQEQERGITIT 150
Query: 189 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 329
A K+ + IID PGH DF + D A+ + + G
Sbjct: 151 SAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 42.7 bits (96), Expect = 1e-04
Identities = 52/171 (30%), Positives = 73/171 (42%), Gaps = 9/171 (5%)
Frame = +3
Query: 9 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 188
H+D GKST L+ G I K G G +Y LDKL +RERGIT+
Sbjct: 74 HIDHGKSTLADRLMELTGTIKK-------------GHGQPQY---LDKL--QRERGITVK 115
Query: 189 IALWKF---------ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 341
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 116 AQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG---- 171
Query: 342 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 494
QT + LAF + ++ +NK+D P ++P E +K ++ S
Sbjct: 172 ---VQAQTVANFYLAFEANL-TIVPVINKIDQ---PTADP--ERVKAQLKS 213
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 41.5 bits (93), Expect = 3e-04
Identities = 25/95 (26%), Positives = 46/95 (48%)
Frame = +3
Query: 210 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 389
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 390 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 494
+ +K +I+ NK+D + + E I+K +++
Sbjct: 178 MMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 41.5 bits (93), Expect = 3e-04
Identities = 25/95 (26%), Positives = 46/95 (48%)
Frame = +3
Query: 210 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 389
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 390 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 494
+ +K +I+ NK+D + + E I+K +++
Sbjct: 178 MMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = +3
Query: 222 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 401
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 402 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 494
K +I+ NK+D + + + E+I++ +++
Sbjct: 174 KDIIIIQNKIDLIQENEAIKQHEDIQRFITN 204
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 40.3 bits (90), Expect = 8e-04
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +3
Query: 204 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 371
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 372 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 500
H + +K +I+ NK+D + + + E I+K + + +
Sbjct: 166 HLAAVEIMQLKHIIILQNKIDLIQENVAINQHEAIQKFIMNTV 208
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 38.3 bits (85), Expect = 0.003
Identities = 35/109 (32%), Positives = 46/109 (42%)
Frame = +3
Query: 141 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 320
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 179
Query: 321 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 467
G QTR A G ++V VNK+D P + P F
Sbjct: 180 VEGPMP-------QTRFVLKKALEFG-HAVVVVVNKIDR---PSARPEF 217
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 38.3 bits (85), Expect = 0.003
Identities = 35/109 (32%), Positives = 46/109 (42%)
Frame = +3
Query: 141 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 320
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 178
Query: 321 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 467
G QTR A G ++V VNK+D P + P F
Sbjct: 179 VEGPMP-------QTRFVLKKALEFG-HAVVVVVNKIDR---PSARPEF 216
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.017
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 162 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 326
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 327 G 329
G
Sbjct: 245 G 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.017
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 162 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 326
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 327 G 329
G
Sbjct: 245 G 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 34.3 bits (75), Expect = 0.050
Identities = 28/90 (31%), Positives = 43/90 (47%)
Frame = +3
Query: 225 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 404
+T +D PGH F + G + D VL+VAA G QT E A + V
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMP-------QTLEAIAHARSANV- 321
Query: 405 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 494
++V +NK D P + P E++K +++S
Sbjct: 322 PVVVAINKCDK---PGANP--EKVKYQLTS 346
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 33.9 bits (74), Expect = 0.067
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Frame = +3
Query: 9 HVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLKAERERG 176
HVD GKST T L+ G I + + + A E +G + K + + E
Sbjct: 27 HVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDE-- 84
Query: 177 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 314
++ + ++Y + +ID+PGH DF + D A+++V
Sbjct: 85 -SLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 30.7 bits (66), Expect = 0.62
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +3
Query: 234 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 410
I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 411 IVGVNKMDSTEPPYSEPRFE-EIKKEV 488
+ +DS E E R E + KEV
Sbjct: 286 NLSTFTLDSDEE--DEVREESNVAKEV 310
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 0.82
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 231 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 410
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 411 IVGVNKMD 434
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 0.82
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +3
Query: 225 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 404
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 405 QLIVGVNKMD 434
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 231 IIDAPGHRDFIKNMITGTSQADCAVLIV 314
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 231 IIDAPGHRDFIKNMITGTSQADCAVLIV 314
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 29.5 bits (63), Expect = 1.4
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Frame = +3
Query: 150 KLKAERERGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 317
K+ A GIT I +K +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 318 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 434
A G QT E A+ +++ +NK+D
Sbjct: 585 ADDG-------IRPQTNE-AIAHAKAAAVPIVIAINKID 615
>At5g19470.1 68418.m02320 MutT/nudix family protein similar to
SP|P41888 Thiamine pyrophosphokinase (EC 2.7.6.2) (TPK)
(Thiamine kinase) {Schizosaccharomyces pombe}; contains
Pfam profile PF00293: NUDIX domain
Length = 365
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 360 QTREHALLAFTLGVKQLIVGV-NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 515
+TR A + LG K +I G+ N++ +P ++ P F I++ + Y GY
Sbjct: 145 RTRAVAHVIKILGNKGIIPGIRNELYPVKPSFNAPAFFSIERAAAPYFGLKGY 197
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 336 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 494
E+G +TR+H G++ LI+ ++D E R E K VS+
Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 390 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 497
T GV++ G+ + +S PP S R E++ E S++
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH 53
>At4g20430.1 68417.m02981 subtilase family protein contains Pfam
profile: PF00082 subtilase family
Length = 856
Score = 27.1 bits (57), Expect = 7.7
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -1
Query: 407 LFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSIN 234
+FDT E L G+ F +TGT ++ IS GS D L I+VS+ N
Sbjct: 714 IFDTSFEDYMSFLCGINGSAPVVFNYTGTNCLRNNATIS--GS-DLNLPSITVSKLNN 768
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,707,268
Number of Sequences: 28952
Number of extensions: 240259
Number of successful extensions: 794
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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