Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312G02f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.2  
AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical prote...    23   8.2  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 64   PTSYLLEDPPRSLDVRQMIY 5
            P   ++ D PR++ VR++IY
Sbjct: 1710 PVQVVVYDDPRTVRVREIIY 1729


>AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical
          protein protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 55 YLLEDPPRSLDVRQM 11
          Y+ + PPR++ VRQ+
Sbjct: 50 YIFQSPPRAVRVRQL 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,047
Number of Sequences: 2352
Number of extensions: 6314
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)