Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312F12f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ413174-1|ABD83327.1| 650|Homo sapiens actin-binding LIM prote... 33 0.80
BC001665-1|AAH01665.1| 544|Homo sapiens ABLIM3 protein protein. 33 0.80
AB075881-1|BAD38663.1| 169|Homo sapiens putative protein produc... 33 0.80
AB020650-1|BAA74866.2| 691|Homo sapiens KIAA0843 protein protein. 33 0.80
BC035581-1|AAH35581.1| 801|Homo sapiens PR domain containing 4 ... 32 1.4
AL133083-1|CAB61401.1| 725|Homo sapiens hypothetical protein pr... 32 1.4
BC093046-1|AAH93046.1| 592|Homo sapiens signal peptide peptidas... 31 2.4
BC028391-1|AAH28391.2| 511|Homo sapiens signal peptide peptidas... 31 2.4
BC001788-1|AAH01788.1| 117|Homo sapiens SPPL2B protein protein. 31 2.4
AY169315-1|AAO12540.1| 592|Homo sapiens intramembrane protease ... 31 2.4
AJ420897-1|CAD13134.1| 564|Homo sapiens SPPL2b protein protein. 31 2.4
AJ345027-1|CAC87788.1| 592|Homo sapiens presenilin-like protein... 31 2.4
AB040965-1|BAA96056.1| 601|Homo sapiens KIAA1532 protein protein. 31 2.4
X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific proteo... 31 3.2
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 31 3.2
J05062-1|AAA35726.1| 480|Homo sapiens protein ( Human cartilage... 31 3.2
AF144757-1|AAD55249.2| 801|Homo sapiens PR-domain zinc-finger p... 31 3.2
BC027971-1|AAH27971.1| 911|Homo sapiens brevican protein. 29 7.5
BC022938-1|AAH22938.1| 911|Homo sapiens brevican protein. 29 7.5
BC010571-1|AAH10571.1| 911|Homo sapiens brevican protein. 29 7.5
BC009117-1|AAH09117.1| 911|Homo sapiens brevican protein. 29 7.5
AY358372-1|AAQ88738.1| 911|Homo sapiens Brevican Core Pro protein. 29 7.5
AL590666-18|CAI16352.1| 911|Homo sapiens brevican protein. 29 7.5
AL365181-12|CAI13056.1| 911|Homo sapiens brevican protein. 29 7.5
AL137504-1|CAB70776.1| 330|Homo sapiens hypothetical protein pr... 29 7.5
AF228710-1|AAG23134.1| 911|Homo sapiens chondroitin sulfate pro... 29 7.5
AB209570-1|BAD92807.1| 850|Homo sapiens brevican isoform 1 vari... 29 7.5
AY314007-1|AAP79900.1| 232|Homo sapiens type I transmembrane C-... 29 9.9
AY314006-1|AAP79899.1| 1817|Homo sapiens DEC-205/DCL-1 fusion pr... 29 9.9
AY184222-1|AAN85434.1| 1873|Homo sapiens DEC-205/DCL-1 fusion pr... 29 9.9
AF499000-1|AAN77050.1| 232|Homo sapiens C-type lectin BIMLEC pr... 29 9.9
AC009961-2|AAY14942.1| 232|Homo sapiens unknown protein. 29 9.9
>DQ413174-1|ABD83327.1| 650|Homo sapiens actin-binding LIM protein
3 protein.
Length = 650
Score = 32.7 bits (71), Expect = 0.80
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -1
Query: 437 TAGEITFTTRSPNVTYVSASDPLLYKFVFLGCF*GNSVHAMPAADV 300
TAG SP Y++ SDPL+ K L + N +H P+AD+
Sbjct: 524 TAGYEMSLNGSPRSHYLADSDPLISKSASLPAYRRNGLHRTPSADL 569
>BC001665-1|AAH01665.1| 544|Homo sapiens ABLIM3 protein protein.
Length = 544
Score = 32.7 bits (71), Expect = 0.80
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -1
Query: 437 TAGEITFTTRSPNVTYVSASDPLLYKFVFLGCF*GNSVHAMPAADV 300
TAG SP Y++ SDPL+ K L + N +H P+AD+
Sbjct: 446 TAGYEMSLNGSPRSHYLADSDPLISKSASLPAYRRNGLHRTPSADL 491
>AB075881-1|BAD38663.1| 169|Homo sapiens putative protein product
of HMFN1661 protein.
Length = 169
Score = 32.7 bits (71), Expect = 0.80
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -1
Query: 437 TAGEITFTTRSPNVTYVSASDPLLYKFVFLGCF*GNSVHAMPAADV 300
TAG SP Y++ SDPL+ K L + N +H P+AD+
Sbjct: 43 TAGYEMSLNGSPRSHYLADSDPLISKSASLPAYRRNGLHRTPSADL 88
>AB020650-1|BAA74866.2| 691|Homo sapiens KIAA0843 protein protein.
Length = 691
Score = 32.7 bits (71), Expect = 0.80
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -1
Query: 437 TAGEITFTTRSPNVTYVSASDPLLYKFVFLGCF*GNSVHAMPAADV 300
TAG SP Y++ SDPL+ K L + N +H P+AD+
Sbjct: 565 TAGYEMSLNGSPRSHYLADSDPLISKSASLPAYRRNGLHRTPSADL 610
>BC035581-1|AAH35581.1| 801|Homo sapiens PR domain containing 4
protein.
Length = 801
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -3
Query: 468 SHLEAVGHRGHSRRNYIYDQKSKCNVCFRE--RSFALQIRFPGVFLRKQRPCNACGRCSL 295
+HL GH G ++ ++K KC++C + L + F G K C+ C +
Sbjct: 569 NHLPTQGHSGSHGPSHSKERKWKCSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFS 628
Query: 294 RPAN 283
P+N
Sbjct: 629 DPSN 632
>AL133083-1|CAB61401.1| 725|Homo sapiens hypothetical protein
protein.
Length = 725
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -3
Query: 468 SHLEAVGHRGHSRRNYIYDQKSKCNVCFRE--RSFALQIRFPGVFLRKQRPCNACGRCSL 295
+HL GH G ++ ++K KC++C + L + F G K C+ C +
Sbjct: 493 NHLPTQGHSGSHGPSHSKERKWKCSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFS 552
Query: 294 RPAN 283
P+N
Sbjct: 553 DPSN 556
>BC093046-1|AAH93046.1| 592|Homo sapiens signal peptide
peptidase-like 2B protein.
Length = 592
Score = 31.1 bits (67), Expect = 2.4
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -2
Query: 463 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 341
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 276 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 313
>BC028391-1|AAH28391.2| 511|Homo sapiens signal peptide
peptidase-like 2B protein.
Length = 511
Score = 31.1 bits (67), Expect = 2.4
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -2
Query: 463 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 341
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 276 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 313
>BC001788-1|AAH01788.1| 117|Homo sapiens SPPL2B protein protein.
Length = 117
Score = 31.1 bits (67), Expect = 2.4
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -2
Query: 463 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 341
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 74 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 111
>AY169315-1|AAO12540.1| 592|Homo sapiens intramembrane protease
protein.
Length = 592
Score = 31.1 bits (67), Expect = 2.4
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -2
Query: 463 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 341
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 276 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 313
>AJ420897-1|CAD13134.1| 564|Homo sapiens SPPL2b protein protein.
Length = 564
Score = 31.1 bits (67), Expect = 2.4
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -2
Query: 463 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 341
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 248 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 285
>AJ345027-1|CAC87788.1| 592|Homo sapiens presenilin-like protein 1
protein.
Length = 592
Score = 31.1 bits (67), Expect = 2.4
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -2
Query: 463 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 341
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 276 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 313
>AB040965-1|BAA96056.1| 601|Homo sapiens KIAA1532 protein protein.
Length = 601
Score = 31.1 bits (67), Expect = 2.4
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -2
Query: 463 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 341
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 285 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 322
>X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific
proteoglycan (600 AA) protein.
Length = 600
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 249 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFV 365
+ H P R W+DA CR S+ TP+E EFV
Sbjct: 402 YRHFPDRET---WVDAERRCREQQSHLSSIVTPEEQEFV 437
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 249 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFV 365
+ H P R W+DA CR S+ TP+E EFV
Sbjct: 2179 YRHFPDRET---WVDAERRCREQQSHLSSIVTPEEQEFV 2214
>J05062-1|AAA35726.1| 480|Homo sapiens protein ( Human
cartilage-specific proteoglycan core protein (CSPCP)
mRNA, 3' end. ).
Length = 480
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 249 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFV 365
+ H P R W+DA CR S+ TP+E EFV
Sbjct: 282 YRHFPDRET---WVDAERRCREQQSHLSSIVTPEEQEFV 317
>AF144757-1|AAD55249.2| 801|Homo sapiens PR-domain zinc-finger
protein PFM1 protein.
Length = 801
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -3
Query: 468 SHLEAVGHRGHSRRNYIYDQKSKCNVCFRE--RSFALQIRFPGVFLRKQRPCNACGRCSL 295
+HL GH G ++ ++K KC++C + L + F G K C+ C +
Sbjct: 569 NHLPTQGHSGSIGPSHSKERKWKCSMCPQAFISPSKLHVYFMGHMGMKPHKCDFCSKAFS 628
Query: 294 RPAN 283
P+N
Sbjct: 629 DPSN 632
>BC027971-1|AAH27971.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 249 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQR 374
++H TR W +A CR + S+ TP+E +F+ R
Sbjct: 700 YKHFSTRR---SWEEAETQCRMYGAHLASISTPEEQDFINNR 738
>BC022938-1|AAH22938.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 249 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQR 374
++H TR W +A CR + S+ TP+E +F+ R
Sbjct: 700 YKHFSTRR---SWEEAETQCRMYGAHLASISTPEEQDFINNR 738
>BC010571-1|AAH10571.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 249 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQR 374
++H TR W +A CR + S+ TP+E +F+ R
Sbjct: 700 YKHFSTRR---SWEEAETQCRMYGAHLASISTPEEQDFINNR 738
>BC009117-1|AAH09117.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 249 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQR 374
++H TR W +A CR + S+ TP+E +F+ R
Sbjct: 700 YKHFSTRR---SWEEAETQCRMYGAHLASISTPEEQDFINNR 738
>AY358372-1|AAQ88738.1| 911|Homo sapiens Brevican Core Pro protein.
Length = 911
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 249 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQR 374
++H TR W +A CR + S+ TP+E +F+ R
Sbjct: 700 YKHFSTRR---SWEEAETQCRMYGAHLASISTPEEQDFINNR 738
>AL590666-18|CAI16352.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 249 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQR 374
++H TR W +A CR + S+ TP+E +F+ R
Sbjct: 700 YKHFSTRR---SWEEAETQCRMYGAHLASISTPEEQDFINNR 738
>AL365181-12|CAI13056.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 249 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQR 374
++H TR W +A CR + S+ TP+E +F+ R
Sbjct: 700 YKHFSTRR---SWEEAETQCRMYGAHLASISTPEEQDFINNR 738
>AL137504-1|CAB70776.1| 330|Homo sapiens hypothetical protein
protein.
Length = 330
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 249 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQR 374
++H TR W +A CR + S+ TP+E +F+ R
Sbjct: 119 YKHFSTRR---SWEEAETQCRMYGAHLASISTPEEQDFINNR 157
>AF228710-1|AAG23134.1| 911|Homo sapiens chondroitin sulfate
proteoglycan BEHAB/brevican protein.
Length = 911
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 249 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQR 374
++H TR W +A CR + S+ TP+E +F+ R
Sbjct: 700 YKHFSTRR---SWEEAETQCRMYGAHLASISTPEEQDFINNR 738
>AB209570-1|BAD92807.1| 850|Homo sapiens brevican isoform 1 variant
protein.
Length = 850
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 249 WEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQR 374
++H TR W +A CR + S+ TP+E +F+ R
Sbjct: 639 YKHFSTRR---SWEEAETQCRMYGAHLASISTPEEQDFINNR 677
>AY314007-1|AAP79900.1| 232|Homo sapiens type I transmembrane
C-type lectin receptor DCL-1 protein.
Length = 232
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 237 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFV 365
Y F E S+E D RN C H D +S+ +EN F+
Sbjct: 37 YIFLQEAIKVESIE----DVRNQCTDHGADMISIHNEEENAFI 75
>AY314006-1|AAP79899.1| 1817|Homo sapiens DEC-205/DCL-1 fusion protein
variant V33-2 protein.
Length = 1817
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 237 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFV 365
Y F E S+E D RN C H D +S+ +EN F+
Sbjct: 1622 YIFLQEAIKVESIE----DVRNQCTDHGADMISIHNEEENAFI 1660
>AY184222-1|AAN85434.1| 1873|Homo sapiens DEC-205/DCL-1 fusion protein
variant V34-2 protein.
Length = 1873
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 237 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFV 365
Y F E S+E D RN C H D +S+ +EN F+
Sbjct: 1678 YIFLQEAIKVESIE----DVRNQCTDHGADMISIHNEEENAFI 1716
>AF499000-1|AAN77050.1| 232|Homo sapiens C-type lectin BIMLEC
precursor protein.
Length = 232
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 237 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFV 365
Y F E S+E D RN C H D +S+ +EN F+
Sbjct: 37 YIFLQEAIKVESIE----DVRNQCTDHGADMISIHNEEENAFI 75
>AC009961-2|AAY14942.1| 232|Homo sapiens unknown protein.
Length = 232
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 237 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFV 365
Y F E S+E D RN C H D +S+ +EN F+
Sbjct: 37 YIFLQEAIKVESIE----DVRNQCTDHGADMISIHNEEENAFI 75
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,818,745
Number of Sequences: 237096
Number of extensions: 1896877
Number of successful extensions: 4757
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 4582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4757
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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