Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312F12f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016687-11|ABL01528.1|  646|Caenorhabditis elegans Hypothetical...    31   0.50 
U42843-4|AAA83595.1|  178|Caenorhabditis elegans Hypothetical pr...    30   0.87 
AL023821-1|CAA19438.2|  355|Caenorhabditis elegans Hypothetical ...    30   0.87 
AF099919-5|AAC68804.1|  188|Caenorhabditis elegans Hypothetical ...    29   2.0  
U13644-8|AAB52679.1|  471|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AC084158-16|AAK68571.2|  347|Caenorhabditis elegans Hypothetical...    29   2.7  
U41276-2|AAA82471.1|   82|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z68297-2|CAA92594.3|  522|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U64836-4|AAG24059.1|  417|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AF016686-15|AAB66231.3|  572|Caenorhabditis elegans C-type lecti...    27   6.2  
AC006783-1|AAF60677.1|  143|Caenorhabditis elegans Hypothetical ...    27   6.2  
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z32683-13|CAA83630.1|  386|Caenorhabditis elegans Hypothetical p...    27   8.1  
U00048-14|AAB53834.1|  270|Caenorhabditis elegans Hypothetical p...    27   8.1  

>AF016687-11|ABL01528.1|  646|Caenorhabditis elegans Hypothetical
           protein T21D12.7 protein.
          Length = 646

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -1

Query: 128 CREQNCCRQAKVPAHLCSVDE-DCETRMRVLAENGYGGRV 12
           C EQ  C+QAK   H+C     +C   M  L ENG   R+
Sbjct: 359 CPEQYMCQQAKNLEHICCTKPLNCPAGMDALRENGGRPRI 398


>U42843-4|AAA83595.1|  178|Caenorhabditis elegans Hypothetical
           protein T19E7.1 protein.
          Length = 178

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 276 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTSGRKCN 425
           +V W+ A N+CR      VS++   EN FV +   + N   IW    K N
Sbjct: 68  DVMWIPAENVCRSMGGHLVSIKDESENLFVHKLRKKNN---IWIGLNKLN 114


>AL023821-1|CAA19438.2|  355|Caenorhabditis elegans Hypothetical
           protein Y102A5B.2 protein.
          Length = 355

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 291 DARNICRRHCMDAVSLETPQENEFVK 368
           DA+ IC+  C + VS+ +  EN F++
Sbjct: 252 DAQEICKTRCANLVSISSANENRFIR 277


>AF099919-5|AAC68804.1|  188|Caenorhabditis elegans Hypothetical
           protein F40G9.10 protein.
          Length = 188

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 291 DARNICRRHCMDAVSLETPQENEFVKQRIARGN 389
           DA N CR    +  S+ +  EN+F+ Q  A GN
Sbjct: 73  DAHNACRSEGSELASIHSLTENQFLVQLSAAGN 105


>U13644-8|AAB52679.1|  471|Caenorhabditis elegans Hypothetical
           protein F56D2.1 protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/63 (22%), Positives = 28/63 (44%)
 Frame = +3

Query: 213 DARGVLHSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNI 392
           D  G++ S    W+H  + + E +   A+N  R +    +   T +     K+ +  GN+
Sbjct: 355 DTSGIMKSVAHEWKHLASAATEEEVAMAKNQFRTNLYQNLETNTQKAGFNAKELLYTGNL 414

Query: 393 RYI 401
           R +
Sbjct: 415 RQL 417


>AC084158-16|AAK68571.2|  347|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.26 protein.
          Length = 347

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 408 SGRKCNFAGCDRGDLQPPNVNGWFWSXFGSQDRAHH 515
           +GR+  F  C  GD +   +  +F+  FG Q R+ +
Sbjct: 295 TGREMRFLKCPLGDPRVAKIRMYFYKKFGEQSRSSY 330


>U41276-2|AAA82471.1|   82|Caenorhabditis elegans Hypothetical
           protein C52B11.4 protein.
          Length = 82

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
 Frame = +3

Query: 363 VKQRIARGNIRYIWTSGRK-----CNFAGCDRGDLQPPNVNG 473
           V Q++   N+R+IW +GRK      N   C      PPN  G
Sbjct: 30  VDQKLNNRNLRFIWLNGRKGKERAANCHCCKTTQASPPNHAG 71


>Z68297-2|CAA92594.3|  522|Caenorhabditis elegans Hypothetical
           protein F11A10.3 protein.
          Length = 522

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 273 LEVDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNI 392
           +E + LD R    R C +A+ ++T  E+   K+R+ R  I
Sbjct: 371 MENNELDVRKTFLRDCREALGIDTAAEDRERKERLERERI 410


>U64836-4|AAG24059.1|  417|Caenorhabditis elegans Hypothetical
           protein F10G2.3 protein.
          Length = 417

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 276 EVDWLDARNICRRHCMDAVSLETPQENEFV 365
           E  ++ A+N C + C D  ++ T  EN ++
Sbjct: 175 EASFVVAQNTCEQFCGDLATIHTANENRYI 204


>AF016686-15|AAB66231.3|  572|Caenorhabditis elegans C-type lectin
           protein 43 protein.
          Length = 572

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 279 VDWLDARNICRRHCMDAVSLETPQENEFVKQRI 377
           +D  DAR +C+R   D VS+ +  EN F++  +
Sbjct: 343 LDEPDARQVCQRVSGDLVSIHSQAENLFLQSLV 375


>AC006783-1|AAF60677.1|  143|Caenorhabditis elegans Hypothetical
           protein Y48D7A.1 protein.
          Length = 143

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +3

Query: 303 ICRRHCMDAV--SLETPQENEFVKQRIARGNIRYIWTSGRKCNFAGCD 440
           IC +H M  +  ++ETP +   + ++   G +RY+  +   C+FA  D
Sbjct: 66  ICVQHHMQCLQANVETP-DKVVINKKKPSGQVRYLGKNNFLCSFASSD 112


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
           protein Y46B2A.3 protein.
          Length = 1145

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 402 WTSGRKCNFAGCDRGDLQPPNVNGW 476
           WT+G     +G  RG  Q P + GW
Sbjct: 475 WTNGANGTTSGTSRGFTQRPTIAGW 499



 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 402 WTSGRKCNFAGCDRGDLQPPNVNGW 476
           WT+G     +G  RG  Q P + GW
Sbjct: 523 WTNGANGTTSGTSRGFTQRPTIAGW 547



 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 402 WTSGRKCNFAGCDRGDLQPPNVNGW 476
           WT+G     +G  RG  Q P + GW
Sbjct: 601 WTNGANGTTSGTSRGFTQRPTIAGW 625



 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 402 WTSGRKCNFAGCDRGDLQPPNVNGW 476
           WT+G     +G  RG  Q P + GW
Sbjct: 649 WTNGANGTTSGTSRGFTQRPTIAGW 673



 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 402 WTSGRKCNFAGCDRGDLQPPNVNGW 476
           WT+G     +G  RG  Q P + GW
Sbjct: 721 WTNGANGTTSGTSRGFTQRPTIAGW 745



 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 402 WTSGRKCNFAGCDRGDLQPPNVNGW 476
           WT+G     +G  RG  Q P + GW
Sbjct: 799 WTNGANGTTSGTSRGFTQRPTIAGW 823


>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
           protein D2005.5 protein.
          Length = 1119

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 307 QMFLASSQSTSKLRVGACSQLKKYECSTPRASRYVEWRTR 188
           ++ +A+S     L V AC+ + KY CS+  A + V+ R R
Sbjct: 829 KVIVATSVVEEGLDVTACNLIIKYNCSSGSAIQLVQQRGR 868


>Z32683-13|CAA83630.1|  386|Caenorhabditis elegans Hypothetical
           protein R07E5.10a protein.
          Length = 386

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 310 RQMFLASSQSTSKLRVGACSQLKKYECSTPRASRY 206
           R +FL   ++ S  R    + LK + C  PRA+ Y
Sbjct: 84  RSLFLFVCRNPSCSRTNDAANLKAFRCQLPRANDY 118


>U00048-14|AAB53834.1|  270|Caenorhabditis elegans Hypothetical
           protein C05D11.13 protein.
          Length = 270

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +3

Query: 276 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWT 407
           E +   A+N  RR   DA+  ETP+E E  +QR A    +Y+ T
Sbjct: 181 EAELRRAKNAQRRR--DAIKNETPEEAENRRQRDAARRRQYLQT 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,130,948
Number of Sequences: 27780
Number of extensions: 285207
Number of successful extensions: 763
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)