Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312F10f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0783 + 11151007-11151343,11153375-11153530,11153898-11153992     27   6.9  
12_01_1063 + 10974522-10974776,10975094-10975599,10976243-109763...    27   9.1  

>03_02_0783 + 11151007-11151343,11153375-11153530,11153898-11153992
          Length = 195

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 304 ILDLDVLKLGHVTEHRHPALLEGFFKTV 221
           +++ D L   HV +HR  AL E FFKT+
Sbjct: 127 VIEDDTLIPKHVPQHRPVALPEEFFKTL 154


>12_01_1063 +
           10974522-10974776,10975094-10975599,10976243-10976321,
           10976337-10976633,10976712-10976976,10977055-10977425
          Length = 590

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 203 QLHAWGDSLKEAFEQCGMAMFGYMTELEYVQIKDVHTIEA 322
           QL  WG     AFE+    M G   +LE +   DVH ++A
Sbjct: 533 QLVKWGRRSSVAFERATSVMKGLRNQLEEIP-ADVHGLDA 571


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,252,086
Number of Sequences: 37544
Number of extensions: 221364
Number of successful extensions: 463
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)