Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312F10f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098499-2|AAC67396.1|  155|Caenorhabditis elegans Hypothetical ...    93   1e-19
AF125463-4|AAD12862.1|  243|Caenorhabditis elegans Hypothetical ...    30   1.2  
Z67756-2|CAA91763.1|  295|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...    28   3.5  
U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF022982-5|AAB69936.2|  799|Caenorhabditis elegans Hypothetical ...    27   8.1  

>AF098499-2|AAC67396.1|  155|Caenorhabditis elegans Hypothetical
           protein C43H8.1 protein.
          Length = 155

 Score = 93.1 bits (221), Expect = 1e-19
 Identities = 46/125 (36%), Positives = 70/125 (56%)
 Frame = +2

Query: 143 EEYYDIPPVKYEYLDHTADVQLHAWGDSLKEAFEQCGMAMFGYMTELEYVQIKDVHTIEA 322
           E+  +I   ++EYLDH AD+QLH+WG +++EAFE C ++MFGYMT+L  V        +A
Sbjct: 8   EDRSEIERRRFEYLDHPADIQLHSWGSTMEEAFEACLVSMFGYMTDLAKVDEMYEFYWKA 67

Query: 323 SADDLMGXXXXXXXXXXXXXSYEPFLICKKLVITEFNTQEFKIVCRCYGEEFVIGKHPXG 502
           S D L G               EP  + K++ I  F+ ++F+I  R +GE F   KH   
Sbjct: 68  SGDSLDGLLFQFLDEALNSFHAEPCFVAKRVEILRFDKKKFEIEFRGWGESFDTSKHETE 127

Query: 503 TEVKA 517
            ++K+
Sbjct: 128 ADIKS 132


>AF125463-4|AAD12862.1|  243|Caenorhabditis elegans Hypothetical
           protein Y49F6C.5 protein.
          Length = 243

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = +3

Query: 168 LNMNIWTILLMFNYTH--GATVLKKPSSSAGWRCSVT*PSLSTSRSRMFTPSKRALTISW 341
           +NM IW I  +F YTH   AT+++       W+ SV   +       M TPS + +T + 
Sbjct: 1   MNMIIWKIKTVFTYTHQCAATMIQ----MLNWKLSVHGKAAPYGLFNMKTPSGKRVTFNT 56

Query: 342 DYFTTSSTN 368
            +    STN
Sbjct: 57  SH-CFESTN 64


>Z67756-2|CAA91763.1|  295|Caenorhabditis elegans Hypothetical
           protein R07A4.3 protein.
          Length = 295

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
 Frame = -2

Query: 82  IYVFTYKYSYF---TTFIDNTILSLHKFLV 2
           I  F +K SYF   T FI+NT+L +  FL+
Sbjct: 246 IMAFQFKMSYFSLFTIFIENTLLIIFAFLI 275


>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical
           protein T05E11.3 protein.
          Length = 760

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +2

Query: 386 YEPFLICKKLVITEFNTQEFKIVCRCYGEEFVIGKHPXGTEVK 514
           Y  FL+  ++V+T  N  + + +       F I K P G  +K
Sbjct: 188 YAAFLVADRVVVTTKNNDDDQYIWESDSASFTISKDPRGNTLK 230


>U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical
           protein F11D5.1c protein.
          Length = 769

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 198 MFNYTHGATVLKKPSSSAGWRCSVT*PSLSTSRS 299
           +F Y + +  +K P SS  W+ ++  P++ST+ S
Sbjct: 384 VFKYDNLSPAVKSPISSNLWKPTINSPTMSTTES 417


>U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical
           protein F11D5.1a protein.
          Length = 812

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 198 MFNYTHGATVLKKPSSSAGWRCSVT*PSLSTSRS 299
           +F Y + +  +K P SS  W+ ++  P++ST+ S
Sbjct: 427 VFKYDNLSPAVKSPISSNLWKPTINSPTMSTTES 460


>AF022982-5|AAB69936.2|  799|Caenorhabditis elegans Hypothetical
           protein T23B12.4 protein.
          Length = 799

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -2

Query: 517 SFDFCAXGMFANYELLAVTPTHYLEL-LRVKLRYD*LLAYQKWFVGE*KQQFVEEVVK*S 341
           ++ + +   F  + LLA+   HY EL  R+ L       Y  WF+G  +  ++   ++ S
Sbjct: 547 NYSYHSVATFVFHNLLAII-NHYFELGFRMDLYVPYEFPYIYWFIGSVQAHWMRTTLERS 605

Query: 340 HEI 332
            EI
Sbjct: 606 QEI 608


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,833,546
Number of Sequences: 27780
Number of extensions: 201782
Number of successful extensions: 499
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)