BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS312F07f (521 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein. 84 3e-18 >L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein. Length = 229 Score = 83.8 bits (198), Expect = 3e-18 Identities = 42/76 (55%), Positives = 49/76 (64%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++EP D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 61 IQKESTLHLVLRLRGG 76 Score = 83.8 bits (198), Expect = 3e-18 Identities = 42/76 (55%), Positives = 49/76 (64%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++EP D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 137 IQKESTLHLVLRLRGG 152 Score = 83.8 bits (198), Expect = 3e-18 Identities = 42/76 (55%), Positives = 49/76 (64%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++EP D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 213 IQKESTLHLVLRLRGG 228 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 439,164 Number of Sequences: 2352 Number of extensions: 7225 Number of successful extensions: 16 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16 length of database: 563,979 effective HSP length: 60 effective length of database: 422,859 effective search space used: 47783067 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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