BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS312F07f (521 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 113 7e-26 U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 81 4e-16 M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 81 4e-16 Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 81 6e-16 U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 81 6e-16 L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 81 6e-16 AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 53 1e-07 Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 32 0.29 Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 32 0.29 Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 32 0.29 Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 32 0.29 Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 32 0.29 Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 32 0.29 Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 32 0.29 AF074395-1|AAC26791.1| 365|Caenorhabditis elegans CET-1 protein. 31 0.50 L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 30 1.2 AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 30 1.2 U64856-2|AAB04986.2| 365|Caenorhabditis elegans Dpp/bmp-like pr... 29 2.7 AF004395-1|AAC27729.1| 365|Caenorhabditis elegans decapentapleg... 29 2.7 M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 28 3.5 AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 28 4.7 U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 27 6.2 Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical pr... 27 8.1 Z72509-2|CAA96646.1| 520|Caenorhabditis elegans Hypothetical pr... 27 8.1 AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 27 8.1 >Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical protein F45H11.2 protein. Length = 77 Score = 113 bits (272), Expect = 7e-26 Identities = 57/76 (75%), Positives = 60/76 (78%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 MLIKVKTLTGKEIE+DIEP D EGIPP QQRLIF+GKQMND+KTA DYK Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60 Query: 138 VQGGSVLHLVLALRGG 91 V GGSVLHLVLALRGG Sbjct: 61 VLGGSVLHLVLALRGG 76 >U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein 1, isoform a protein. Length = 838 Score = 81.4 bits (192), Expect = 4e-16 Identities = 41/77 (53%), Positives = 49/77 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820 Query: 138 VQGGSVLHLVLALRGGE 88 +Q S LHLVL LRGG+ Sbjct: 821 IQKESTLHLVLRLRGGD 837 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 61 IQKESTLHLVLRLRGG 76 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 137 IQKESTLHLVLRLRGG 152 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 213 IQKESTLHLVLRLRGG 228 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 289 IQKESTLHLVLRLRGG 304 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 365 IQKESTLHLVLRLRGG 380 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 517 IQKESTLHLVLRLRGG 532 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 593 IQKESTLHLVLRLRGG 608 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 669 IQKESTLHLVLRLRGG 684 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 745 IQKESTLHLVLRLRGG 760 Score = 78.2 bits (184), Expect = 3e-15 Identities = 40/76 (52%), Positives = 47/76 (61%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTL GK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 441 IQKESTLHLVLRLRGG 456 >M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin protein. Length = 838 Score = 81.4 bits (192), Expect = 4e-16 Identities = 41/77 (53%), Positives = 49/77 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820 Query: 138 VQGGSVLHLVLALRGGE 88 +Q S LHLVL LRGG+ Sbjct: 821 IQKQSTLHLVLRLRGGD 837 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 61 IQKESTLHLVLRLRGG 76 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 137 IQKESTLHLVLRLRGG 152 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 213 IQKESTLHLVLRLRGG 228 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 289 IQKESTLHLVLRLRGG 304 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 365 IQKESTLHLVLRLRGG 380 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 441 IQKESTLHLVLRLRGG 456 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 517 IQKESTLHLVLRLRGG 532 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 593 IQKESTLHLVLRLRGG 608 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 669 IQKESTLHLVLRLRGG 684 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 745 IQKESTLHLVLRLRGG 760 >Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical protein ZK1010.1 protein. Length = 128 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 61 IQKESTLHLVLRLRGG 76 >U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein 1, isoform c protein. Length = 538 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 61 IQKESTLHLVLRLRGG 76 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 137 IQKESTLHLVLRLRGG 152 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 213 IQKESTLHLVLRLRGG 228 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 289 IQKESTLHLVLRLRGG 304 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 365 IQKESTLHLVLRLRGG 380 Score = 78.2 bits (184), Expect = 3e-15 Identities = 40/76 (52%), Positives = 47/76 (61%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTL GK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 441 IQKESTLHLVLRLRGG 456 Score = 45.6 bits (103), Expect = 2e-05 Identities = 24/47 (51%), Positives = 28/47 (59%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSG 178 M I VKTLTGK I +++E D EGIPP QQRLIF+G Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503 >L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribosomal fusion protein protein. Length = 128 Score = 80.6 bits (190), Expect = 6e-16 Identities = 41/76 (53%), Positives = 48/76 (63%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139 M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 138 VQGGSVLHLVLALRGG 91 +Q S LHLVL LRGG Sbjct: 61 IQKESTLHLVLRLRGG 76 >AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical protein F52C6.4 protein. Length = 292 Score = 52.8 bits (121), Expect = 1e-07 Identities = 25/71 (35%), Positives = 37/71 (52%) Frame = -3 Query: 321 KMLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDY 142 K+ + VKTL GK I I I+ D G+PP QQRLIF Q+ +++ Y Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219 Query: 141 KVQGGSVLHLV 109 ++ ++HLV Sbjct: 220 NIRDEDIIHLV 230 >Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. Length = 292 Score = 31.9 bits (69), Expect = 0.29 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = -3 Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106 +Q +I++GK + DE+T +K+ G +HLV+ Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78 >Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical protein F15C11.2c protein. Length = 454 Score = 31.9 bits (69), Expect = 0.29 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = -3 Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106 +Q +I++GK + DE+T +K+ G +HLV+ Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78 >Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical protein F15C11.2b protein. Length = 484 Score = 31.9 bits (69), Expect = 0.29 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = -3 Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106 +Q +I++GK + DE+T +K+ G +HLV+ Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78 >Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical protein F15C11.2a protein. Length = 502 Score = 31.9 bits (69), Expect = 0.29 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = -3 Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106 +Q +I++GK + DE+T +K+ G +HLV+ Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78 >Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical protein F15C11.2c protein. Length = 454 Score = 31.9 bits (69), Expect = 0.29 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = -3 Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106 +Q +I++GK + DE+T +K+ G +HLV+ Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78 >Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical protein F15C11.2b protein. Length = 484 Score = 31.9 bits (69), Expect = 0.29 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = -3 Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106 +Q +I++GK + DE+T +K+ G +HLV+ Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78 >Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical protein F15C11.2a protein. Length = 502 Score = 31.9 bits (69), Expect = 0.29 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = -3 Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106 +Q +I++GK + DE+T +K+ G +HLV+ Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78 >AF074395-1|AAC26791.1| 365|Caenorhabditis elegans CET-1 protein. Length = 365 Score = 31.1 bits (67), Expect = 0.50 Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%) Frame = -2 Query: 274 RYRTXRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 170 R + RQ+G ++RK+R+KGR H S++ R+T+ Sbjct: 233 RRKRSRQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268 >L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:ribosomal proteinfusion protein protein. Length = 163 Score = 29.9 bits (64), Expect = 1.2 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = -3 Query: 216 GIPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 91 GIP ++QRL ++G+Q+ D D + + +++ L L GG Sbjct: 33 GIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70 >AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like family protein 1,isoform a protein. Length = 163 Score = 29.9 bits (64), Expect = 1.2 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = -3 Query: 216 GIPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 91 GIP ++QRL ++G+Q+ D D + + +++ L L GG Sbjct: 33 GIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70 >U64856-2|AAB04986.2| 365|Caenorhabditis elegans Dpp/bmp-like protein 1 protein. Length = 365 Score = 28.7 bits (61), Expect = 2.7 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = -2 Query: 274 RYRTXRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 170 R + Q+G ++RK+R+KGR H S++ R+T+ Sbjct: 233 RRKRSAQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268 >AF004395-1|AAC27729.1| 365|Caenorhabditis elegans decapentaplegic protein homolog protein. Length = 365 Score = 28.7 bits (61), Expect = 2.7 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = -2 Query: 274 RYRTXRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 170 R + Q+G ++RK+R+KGR H S++ R+T+ Sbjct: 233 RRKRSAQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268 >M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.elegans ubiquitin A(UbiA) gene, 5' end. ). Length = 37 Score = 28.3 bits (60), Expect = 3.5 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = -3 Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIP 208 M I VKTLTGK I +++E D EGIP Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37 >AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical protein F54D10.7 protein. Length = 264 Score = 27.9 bits (59), Expect = 4.7 Identities = 13/60 (21%), Positives = 29/60 (48%) Frame = -3 Query: 297 LTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVL 118 L G I ++++ D G+ +QRL+ + K++ +T ++ ++ GSV+ Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248 >U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical protein C16C8.4 protein. Length = 226 Score = 27.5 bits (58), Expect = 6.2 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -3 Query: 213 IPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVL 118 IP L FSGK++ D + DY +Q S + Sbjct: 188 IPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTI 219 >Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical protein R05H10.5 protein. Length = 163 Score = 27.1 bits (57), Expect = 8.1 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -3 Query: 360 SPCYITINNYNSFKMLIKVKTLTGKEI 280 S C +T +NYN FK L+ V G E+ Sbjct: 34 SQCGLTNSNYNQFKELLDVYKKDGLEV 60 >Z72509-2|CAA96646.1| 520|Caenorhabditis elegans Hypothetical protein F32G8.2 protein. Length = 520 Score = 27.1 bits (57), Expect = 8.1 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 106 QNKMKY*TSLNFVILSCLLIIHL 174 +N++K SL F ILSCLLII + Sbjct: 6 KNQVKIFPSLIFAILSCLLIIFI 28 >AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical protein Y46G5A.4 protein. Length = 2145 Score = 27.1 bits (57), Expect = 8.1 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%) Frame = -2 Query: 511 FEILNIFSMKIKSKTKT-ILLELPRA--EFGTRKVVENKKVI 395 ++ + +FSM +K KTKT L+E+ A EFG + + VI Sbjct: 1825 YQTIELFSMSLKEKTKTRALIEIISASSEFGNVPMRHKEDVI 1866 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,048,774 Number of Sequences: 27780 Number of extensions: 176718 Number of successful extensions: 652 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 615 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 652 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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