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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312F07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78420-1|CAB01708.1|   77|Caenorhabditis elegans Hypothetical pr...   113   7e-26
U23172-1|AAC46525.1|  838|Caenorhabditis elegans Ubiquitin prote...    81   4e-16
M23433-1|AAA28154.1|  838|Caenorhabditis elegans polyubiquitin p...    81   4e-16
Z82083-1|CAB04967.1|  128|Caenorhabditis elegans Hypothetical pr...    81   6e-16
U23172-2|AAM22069.2|  538|Caenorhabditis elegans Ubiquitin prote...    81   6e-16
L31492-1|AAC37252.1|  128|Caenorhabditis elegans ubiquitin/ribos...    81   6e-16
AF040645-8|AAB94982.1|  292|Caenorhabditis elegans Hypothetical ...    53   1e-07
Z99266-1|CAB16464.1|  292|Caenorhabditis elegans F15C11.2 protein.     32   0.29 
Z98262-3|CAD44156.1|  454|Caenorhabditis elegans Hypothetical pr...    32   0.29 
Z98262-2|CAD44155.1|  484|Caenorhabditis elegans Hypothetical pr...    32   0.29 
Z98262-1|CAB10932.1|  502|Caenorhabditis elegans Hypothetical pr...    32   0.29 
Z71260-4|CAD44116.1|  454|Caenorhabditis elegans Hypothetical pr...    32   0.29 
Z71260-3|CAD44115.1|  484|Caenorhabditis elegans Hypothetical pr...    32   0.29 
Z71260-2|CAA95799.1|  502|Caenorhabditis elegans Hypothetical pr...    32   0.29 
AF074395-1|AAC26791.1|  365|Caenorhabditis elegans CET-1 protein.      31   0.50 
L16530-1|AAA28161.1|  163|Caenorhabditis elegans ubiquitin-like:...    30   1.2  
AC006651-4|AAF39865.1|  163|Caenorhabditis elegans Ubiquitin-lik...    30   1.2  
U64856-2|AAB04986.2|  365|Caenorhabditis elegans Dpp/bmp-like pr...    29   2.7  
AF004395-1|AAC27729.1|  365|Caenorhabditis elegans decapentapleg...    29   2.7  
M21321-1|AAA28153.1|   37|Caenorhabditis elegans protein ( C.ele...    28   3.5  
AF099917-6|AAC68780.1|  264|Caenorhabditis elegans Hypothetical ...    28   4.7  
U80452-4|AAB37860.1|  226|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z83119-3|CAB05581.1|  163|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z72509-2|CAA96646.1|  520|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z78420-1|CAB01708.1|   77|Caenorhabditis elegans Hypothetical
           protein F45H11.2 protein.
          Length = 77

 Score =  113 bits (272), Expect = 7e-26
 Identities = 57/76 (75%), Positives = 60/76 (78%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           MLIKVKTLTGKEIE+DIEP D            EGIPP QQRLIF+GKQMND+KTA DYK
Sbjct: 1   MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60

Query: 138 VQGGSVLHLVLALRGG 91
           V GGSVLHLVLALRGG
Sbjct: 61  VLGGSVLHLVLALRGG 76


>U23172-1|AAC46525.1|  838|Caenorhabditis elegans Ubiquitin protein
           1, isoform a protein.
          Length = 838

 Score = 81.4 bits (192), Expect = 4e-16
 Identities = 41/77 (53%), Positives = 49/77 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820

Query: 138 VQGGSVLHLVLALRGGE 88
           +Q  S LHLVL LRGG+
Sbjct: 821 IQKESTLHLVLRLRGGD 837



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 77  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760



 Score = 78.2 bits (184), Expect = 3e-15
 Identities = 40/76 (52%), Positives = 47/76 (61%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTL GK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456


>M23433-1|AAA28154.1|  838|Caenorhabditis elegans polyubiquitin
           protein.
          Length = 838

 Score = 81.4 bits (192), Expect = 4e-16
 Identities = 41/77 (53%), Positives = 49/77 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820

Query: 138 VQGGSVLHLVLALRGGE 88
           +Q  S LHLVL LRGG+
Sbjct: 821 IQKQSTLHLVLRLRGGD 837



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 77  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760


>Z82083-1|CAB04967.1|  128|Caenorhabditis elegans Hypothetical
           protein ZK1010.1 protein.
          Length = 128

 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>U23172-2|AAM22069.2|  538|Caenorhabditis elegans Ubiquitin protein
           1, isoform c protein.
          Length = 538

 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 77  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304



 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380



 Score = 78.2 bits (184), Expect = 3e-15
 Identities = 40/76 (52%), Positives = 47/76 (61%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTL GK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456



 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 24/47 (51%), Positives = 28/47 (59%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSG 178
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+G
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503


>L31492-1|AAC37252.1|  128|Caenorhabditis elegans
           ubiquitin/ribosomal fusion protein protein.
          Length = 128

 Score = 80.6 bits (190), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
           M I VKTLTGK I +++E  D            EGIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 138 VQGGSVLHLVLALRGG 91
           +Q  S LHLVL LRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>AF040645-8|AAB94982.1|  292|Caenorhabditis elegans Hypothetical
           protein F52C6.4 protein.
          Length = 292

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 25/71 (35%), Positives = 37/71 (52%)
 Frame = -3

Query: 321 KMLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDY 142
           K+ + VKTL GK I I I+  D             G+PP QQRLIF   Q+ +++    Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219

Query: 141 KVQGGSVLHLV 109
            ++   ++HLV
Sbjct: 220 NIRDEDIIHLV 230


>Z99266-1|CAB16464.1|  292|Caenorhabditis elegans F15C11.2 protein.
          Length = 292

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -3

Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106
           +Q  +I++GK + DE+T   +K+  G  +HLV+
Sbjct: 46  EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78


>Z98262-3|CAD44156.1|  454|Caenorhabditis elegans Hypothetical
           protein F15C11.2c protein.
          Length = 454

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -3

Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106
           +Q  +I++GK + DE+T   +K+  G  +HLV+
Sbjct: 46  EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78


>Z98262-2|CAD44155.1|  484|Caenorhabditis elegans Hypothetical
           protein F15C11.2b protein.
          Length = 484

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -3

Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106
           +Q  +I++GK + DE+T   +K+  G  +HLV+
Sbjct: 46  EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78


>Z98262-1|CAB10932.1|  502|Caenorhabditis elegans Hypothetical
           protein F15C11.2a protein.
          Length = 502

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -3

Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106
           +Q  +I++GK + DE+T   +K+  G  +HLV+
Sbjct: 46  EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78


>Z71260-4|CAD44116.1|  454|Caenorhabditis elegans Hypothetical
           protein F15C11.2c protein.
          Length = 454

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -3

Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106
           +Q  +I++GK + DE+T   +K+  G  +HLV+
Sbjct: 46  EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78


>Z71260-3|CAD44115.1|  484|Caenorhabditis elegans Hypothetical
           protein F15C11.2b protein.
          Length = 484

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -3

Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106
           +Q  +I++GK + DE+T   +K+  G  +HLV+
Sbjct: 46  EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78


>Z71260-2|CAA95799.1|  502|Caenorhabditis elegans Hypothetical
           protein F15C11.2a protein.
          Length = 502

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -3

Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106
           +Q  +I++GK + DE+T   +K+  G  +HLV+
Sbjct: 46  EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78


>AF074395-1|AAC26791.1|  365|Caenorhabditis elegans CET-1 protein.
          Length = 365

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -2

Query: 274 RYRTXRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 170
           R +  RQ+G ++RK+R+KGR H      S++ R+T+
Sbjct: 233 RRKRSRQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268


>L16530-1|AAA28161.1|  163|Caenorhabditis elegans
           ubiquitin-like:ribosomal proteinfusion protein protein.
          Length = 163

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -3

Query: 216 GIPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 91
           GIP ++QRL ++G+Q+ D     D  +   + +++ L L GG
Sbjct: 33  GIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70


>AC006651-4|AAF39865.1|  163|Caenorhabditis elegans Ubiquitin-like
           family protein 1,isoform a protein.
          Length = 163

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -3

Query: 216 GIPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 91
           GIP ++QRL ++G+Q+ D     D  +   + +++ L L GG
Sbjct: 33  GIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70


>U64856-2|AAB04986.2|  365|Caenorhabditis elegans Dpp/bmp-like
           protein 1 protein.
          Length = 365

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -2

Query: 274 RYRTXRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 170
           R +   Q+G ++RK+R+KGR H      S++ R+T+
Sbjct: 233 RRKRSAQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268


>AF004395-1|AAC27729.1|  365|Caenorhabditis elegans decapentaplegic
           protein homolog protein.
          Length = 365

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -2

Query: 274 RYRTXRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 170
           R +   Q+G ++RK+R+KGR H      S++ R+T+
Sbjct: 233 RRKRSAQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268


>M21321-1|AAA28153.1|   37|Caenorhabditis elegans protein (
           C.elegans ubiquitin A(UbiA) gene, 5' end. ).
          Length = 37

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -3

Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIP 208
           M I VKTLTGK I +++E  D            EGIP
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37


>AF099917-6|AAC68780.1|  264|Caenorhabditis elegans Hypothetical
           protein F54D10.7 protein.
          Length = 264

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/60 (21%), Positives = 29/60 (48%)
 Frame = -3

Query: 297 LTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVL 118
           L G  I ++++  D             G+   +QRL+ + K++   +T ++  ++ GSV+
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248


>U80452-4|AAB37860.1|  226|Caenorhabditis elegans Hypothetical
           protein C16C8.4 protein.
          Length = 226

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 213 IPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVL 118
           IP     L FSGK++ D  +  DY +Q  S +
Sbjct: 188 IPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTI 219


>Z83119-3|CAB05581.1|  163|Caenorhabditis elegans Hypothetical
           protein R05H10.5 protein.
          Length = 163

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 360 SPCYITINNYNSFKMLIKVKTLTGKEI 280
           S C +T +NYN FK L+ V    G E+
Sbjct: 34  SQCGLTNSNYNQFKELLDVYKKDGLEV 60


>Z72509-2|CAA96646.1|  520|Caenorhabditis elegans Hypothetical
           protein F32G8.2 protein.
          Length = 520

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 106 QNKMKY*TSLNFVILSCLLIIHL 174
           +N++K   SL F ILSCLLII +
Sbjct: 6   KNQVKIFPSLIFAILSCLLIIFI 28


>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
            protein Y46G5A.4 protein.
          Length = 2145

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
 Frame = -2

Query: 511  FEILNIFSMKIKSKTKT-ILLELPRA--EFGTRKVVENKKVI 395
            ++ + +FSM +K KTKT  L+E+  A  EFG   +   + VI
Sbjct: 1825 YQTIELFSMSLKEKTKTRALIEIISASSEFGNVPMRHKEDVI 1866


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,048,774
Number of Sequences: 27780
Number of extensions: 176718
Number of successful extensions: 652
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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