Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312F07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 113 7e-26
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 81 4e-16
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 81 4e-16
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 81 6e-16
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 81 6e-16
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 81 6e-16
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 53 1e-07
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 32 0.29
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 32 0.29
AF074395-1|AAC26791.1| 365|Caenorhabditis elegans CET-1 protein. 31 0.50
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 30 1.2
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 30 1.2
U64856-2|AAB04986.2| 365|Caenorhabditis elegans Dpp/bmp-like pr... 29 2.7
AF004395-1|AAC27729.1| 365|Caenorhabditis elegans decapentapleg... 29 2.7
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 28 3.5
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 28 4.7
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z72509-2|CAA96646.1| 520|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 113 bits (272), Expect = 7e-26
Identities = 57/76 (75%), Positives = 60/76 (78%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
MLIKVKTLTGKEIE+DIEP D EGIPP QQRLIF+GKQMND+KTA DYK
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 138 VQGGSVLHLVLALRGG 91
V GGSVLHLVLALRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 81.4 bits (192), Expect = 4e-16
Identities = 41/77 (53%), Positives = 49/77 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 138 VQGGSVLHLVLALRGGE 88
+Q S LHLVL LRGG+
Sbjct: 821 IQKESTLHLVLRLRGGD 837
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 78.2 bits (184), Expect = 3e-15
Identities = 40/76 (52%), Positives = 47/76 (61%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTL GK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 81.4 bits (192), Expect = 4e-16
Identities = 41/77 (53%), Positives = 49/77 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 138 VQGGSVLHLVLALRGGE 88
+Q S LHLVL LRGG+
Sbjct: 821 IQKQSTLHLVLRLRGGD 837
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 78.2 bits (184), Expect = 3e-15
Identities = 40/76 (52%), Positives = 47/76 (61%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTL GK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSG 178
M I VKTLTGK I +++E D EGIPP QQRLIF+G
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 80.6 bits (190), Expect = 6e-16
Identities = 41/76 (53%), Positives = 48/76 (63%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYK 139
M I VKTLTGK I +++E D EGIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 138 VQGGSVLHLVLALRGG 91
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 52.8 bits (121), Expect = 1e-07
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = -3
Query: 321 KMLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDY 142
K+ + VKTL GK I I I+ D G+PP QQRLIF Q+ +++ Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 141 KVQGGSVLHLV 109
++ ++HLV
Sbjct: 220 NIRDEDIIHLV 230
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 31.9 bits (69), Expect = 0.29
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -3
Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.29
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -3
Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 31.9 bits (69), Expect = 0.29
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -3
Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.29
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -3
Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.29
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -3
Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 31.9 bits (69), Expect = 0.29
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -3
Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.29
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -3
Query: 204 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 106
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>AF074395-1|AAC26791.1| 365|Caenorhabditis elegans CET-1 protein.
Length = 365
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -2
Query: 274 RYRTXRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 170
R + RQ+G ++RK+R+KGR H S++ R+T+
Sbjct: 233 RRKRSRQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -3
Query: 216 GIPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 91
GIP ++QRL ++G+Q+ D D + + +++ L L GG
Sbjct: 33 GIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -3
Query: 216 GIPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 91
GIP ++QRL ++G+Q+ D D + + +++ L L GG
Sbjct: 33 GIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>U64856-2|AAB04986.2| 365|Caenorhabditis elegans Dpp/bmp-like
protein 1 protein.
Length = 365
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -2
Query: 274 RYRTXRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 170
R + Q+G ++RK+R+KGR H S++ R+T+
Sbjct: 233 RRKRSAQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268
>AF004395-1|AAC27729.1| 365|Caenorhabditis elegans decapentaplegic
protein homolog protein.
Length = 365
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -2
Query: 274 RYRTXRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 170
R + Q+G ++RK+R+KGR H S++ R+T+
Sbjct: 233 RRKRSAQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -3
Query: 318 MLIKVKTLTGKEIEIDIEPXDXXXXXXXXXXXXEGIP 208
M I VKTLTGK I +++E D EGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/60 (21%), Positives = 29/60 (48%)
Frame = -3
Query: 297 LTGKEIEIDIEPXDXXXXXXXXXXXXEGIPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVL 118
L G I ++++ D G+ +QRL+ + K++ +T ++ ++ GSV+
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 213 IPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVL 118
IP L FSGK++ D + DY +Q S +
Sbjct: 188 IPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTI 219
>Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical
protein R05H10.5 protein.
Length = 163
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 360 SPCYITINNYNSFKMLIKVKTLTGKEI 280
S C +T +NYN FK L+ V G E+
Sbjct: 34 SQCGLTNSNYNQFKELLDVYKKDGLEV 60
>Z72509-2|CAA96646.1| 520|Caenorhabditis elegans Hypothetical
protein F32G8.2 protein.
Length = 520
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 106 QNKMKY*TSLNFVILSCLLIIHL 174
+N++K SL F ILSCLLII +
Sbjct: 6 KNQVKIFPSLIFAILSCLLIIFI 28
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = -2
Query: 511 FEILNIFSMKIKSKTKT-ILLELPRA--EFGTRKVVENKKVI 395
++ + +FSM +K KTKT L+E+ A EFG + + VI
Sbjct: 1825 YQTIELFSMSLKEKTKTRALIEIISASSEFGNVPMRHKEDVI 1866
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,048,774
Number of Sequences: 27780
Number of extensions: 176718
Number of successful extensions: 652
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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