Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312F04f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97065-1|CAA65775.1|  767|Homo sapiens Sec23 protein protein.          30   4.3  
X97064-1|CAA65774.1|  765|Homo sapiens Sec23 protein protein.          30   4.3  
BC095404-1|AAH95404.1|  767|Homo sapiens Sec23 homolog B (S. cer...    30   4.3  
BC036649-1|AAH36649.1|  765|Homo sapiens Sec23 homolog A (S. cer...    30   4.3  
BC005404-1|AAH05404.1|  767|Homo sapiens SEC23B protein protein.       30   4.3  
BC005032-1|AAH05032.1|  767|Homo sapiens Sec23 homolog B (S. cer...    30   4.3  
AL121900-4|CAH73150.1|  246|Homo sapiens Sec23 homolog B (S. cer...    30   4.3  
AL121900-3|CAH73149.1|  767|Homo sapiens Sec23 homolog B (S. cer...    30   4.3  
AL121893-10|CAI12514.1|  246|Homo sapiens Sec23 homolog B (S. ce...    30   4.3  
AL121893-8|CAI12512.1|  767|Homo sapiens Sec23 homolog B (S. cer...    30   4.3  
AL049686-1|CAB41257.1|  474|Homo sapiens hypothetical protein pr...    29   7.5  
AL023753-2|CAI19425.1|  474|Homo sapiens PRAME family member 1 p...    29   7.5  
AL022101-2|CAI22990.1|  474|Homo sapiens PRAME family member 1 p...    29   7.5  

>X97065-1|CAA65775.1|  767|Homo sapiens Sec23 protein protein.
          Length = 767

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 5   GAPVLTDDVSLKLFPILIKRYKVDN 79
           GAP+LTDDVSL++F   +K+  V +
Sbjct: 741 GAPILTDDVSLQVFMDHLKKLAVSS 765


>X97064-1|CAA65774.1|  765|Homo sapiens Sec23 protein protein.
          Length = 765

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 5   GAPVLTDDVSLKLFPILIKRYKVDN 79
           GAP+LTDDVSL++F   +K+  V +
Sbjct: 739 GAPILTDDVSLQVFMDHLKKLAVSS 763


>BC095404-1|AAH95404.1|  767|Homo sapiens Sec23 homolog B (S.
           cerevisiae) protein.
          Length = 767

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 5   GAPVLTDDVSLKLFPILIKRYKVDN 79
           GAP+LTDDVSL++F   +K+  V +
Sbjct: 741 GAPILTDDVSLQVFMDHLKKLAVSS 765


>BC036649-1|AAH36649.1|  765|Homo sapiens Sec23 homolog A (S.
           cerevisiae) protein.
          Length = 765

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 5   GAPVLTDDVSLKLFPILIKRYKVDN 79
           GAP+LTDDVSL++F   +K+  V +
Sbjct: 739 GAPILTDDVSLQVFMDHLKKLAVSS 763


>BC005404-1|AAH05404.1|  767|Homo sapiens SEC23B protein protein.
          Length = 767

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 5   GAPVLTDDVSLKLFPILIKRYKVDN 79
           GAP+LTDDVSL++F   +K+  V +
Sbjct: 741 GAPILTDDVSLQVFMDHLKKLAVSS 765


>BC005032-1|AAH05032.1|  767|Homo sapiens Sec23 homolog B (S.
           cerevisiae) protein.
          Length = 767

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 5   GAPVLTDDVSLKLFPILIKRYKVDN 79
           GAP+LTDDVSL++F   +K+  V +
Sbjct: 741 GAPILTDDVSLQVFMDHLKKLAVSS 765


>AL121900-4|CAH73150.1|  246|Homo sapiens Sec23 homolog B (S.
           cerevisiae) protein.
          Length = 246

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 5   GAPVLTDDVSLKLFPILIKRYKVDN 79
           GAP+LTDDVSL++F   +K+  V +
Sbjct: 220 GAPILTDDVSLQVFMDHLKKLAVSS 244


>AL121900-3|CAH73149.1|  767|Homo sapiens Sec23 homolog B (S.
           cerevisiae) protein.
          Length = 767

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 5   GAPVLTDDVSLKLFPILIKRYKVDN 79
           GAP+LTDDVSL++F   +K+  V +
Sbjct: 741 GAPILTDDVSLQVFMDHLKKLAVSS 765


>AL121893-10|CAI12514.1|  246|Homo sapiens Sec23 homolog B (S.
           cerevisiae) protein.
          Length = 246

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 5   GAPVLTDDVSLKLFPILIKRYKVDN 79
           GAP+LTDDVSL++F   +K+  V +
Sbjct: 220 GAPILTDDVSLQVFMDHLKKLAVSS 244


>AL121893-8|CAI12512.1|  767|Homo sapiens Sec23 homolog B (S.
           cerevisiae) protein.
          Length = 767

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 5   GAPVLTDDVSLKLFPILIKRYKVDN 79
           GAP+LTDDVSL++F   +K+  V +
Sbjct: 741 GAPILTDDVSLQVFMDHLKKLAVSS 765


>AL049686-1|CAB41257.1|  474|Homo sapiens hypothetical protein
           protein.
          Length = 474

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +3

Query: 357 VTNTVDLTKWLFKRTFIISLDSISD*MLRAQM*SRDIRKFECYLNPIK 500
           + N +   K+L K   II L+SI +  +R     R IRK  CYL  +K
Sbjct: 185 LVNYLTPIKYLRKSLKIIYLNSIQELEIRNMSWPRLIRKLRCYLKEMK 232


>AL023753-2|CAI19425.1|  474|Homo sapiens PRAME family member 1
           protein.
          Length = 474

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +3

Query: 357 VTNTVDLTKWLFKRTFIISLDSISD*MLRAQM*SRDIRKFECYLNPIK 500
           + N +   K+L K   II L+SI +  +R     R IRK  CYL  +K
Sbjct: 185 LVNYLTPIKYLRKSLKIIYLNSIQELEIRNMSWPRLIRKLRCYLKEMK 232


>AL022101-2|CAI22990.1|  474|Homo sapiens PRAME family member 1
           protein.
          Length = 474

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +3

Query: 357 VTNTVDLTKWLFKRTFIISLDSISD*MLRAQM*SRDIRKFECYLNPIK 500
           + N +   K+L K   II L+SI +  +R     R IRK  CYL  +K
Sbjct: 185 LVNYLTPIKYLRKSLKIIYLNSIQELEIRNMSWPRLIRKLRCYLKEMK 232


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,028,332
Number of Sequences: 237096
Number of extensions: 1103470
Number of successful extensions: 1469
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1469
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)