Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312F04f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001619-1|AAN71374.1|  773|Drosophila melanogaster RE35250p pro...    36   0.033
AJ276482-1|CAB81549.1|  769|Drosophila melanogaster putative Sec...    36   0.033
AE014297-319|AAF51979.2|  773|Drosophila melanogaster CG1250-PB,...    36   0.033
AE014297-318|AAF51978.2|  773|Drosophila melanogaster CG1250-PA,...    36   0.033
AE014134-1516|AAN10669.1| 1005|Drosophila melanogaster CG31897-P...    29   3.8  

>BT001619-1|AAN71374.1|  773|Drosophila melanogaster RE35250p
           protein.
          Length = 773

 Score = 35.9 bits (79), Expect = 0.033
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = +2

Query: 2   GGAPVLTDDVSLKLFPILIKRYKVDNT 82
           GGAPVLTDDVSL+LF   +K+  V  T
Sbjct: 746 GGAPVLTDDVSLQLFMEHLKKLAVSTT 772


>AJ276482-1|CAB81549.1|  769|Drosophila melanogaster putative Sec23
           protein protein.
          Length = 769

 Score = 35.9 bits (79), Expect = 0.033
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = +2

Query: 2   GGAPVLTDDVSLKLFPILIKRYKVDNT 82
           GGAPVLTDDVSL+LF   +K+  V  T
Sbjct: 742 GGAPVLTDDVSLQLFMEHLKKLAVSTT 768


>AE014297-319|AAF51979.2|  773|Drosophila melanogaster CG1250-PB,
           isoform B protein.
          Length = 773

 Score = 35.9 bits (79), Expect = 0.033
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = +2

Query: 2   GGAPVLTDDVSLKLFPILIKRYKVDNT 82
           GGAPVLTDDVSL+LF   +K+  V  T
Sbjct: 746 GGAPVLTDDVSLQLFMEHLKKLAVSTT 772


>AE014297-318|AAF51978.2|  773|Drosophila melanogaster CG1250-PA,
           isoform A protein.
          Length = 773

 Score = 35.9 bits (79), Expect = 0.033
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = +2

Query: 2   GGAPVLTDDVSLKLFPILIKRYKVDNT 82
           GGAPVLTDDVSL+LF   +K+  V  T
Sbjct: 746 GGAPVLTDDVSLQLFMEHLKKLAVSTT 772


>AE014134-1516|AAN10669.1| 1005|Drosophila melanogaster CG31897-PA
           protein.
          Length = 1005

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +2

Query: 5   GAPVLTDDVSLKLFPILIKRYKVDNTELRLMTSDRR-QR*QLTSDFLNTSCEVIARDFGV 181
           G P+ TD+   ++ PIL K ++  N +L +++ ++R Q  +  ++   T  EV+++  G 
Sbjct: 805 GKPI-TDEKYEEMLPILEKNFQFINEQLMILSREKRVQEMKFRNEIQRTEEEVMSKVSGE 863

Query: 182 PEHL 193
             H+
Sbjct: 864 SCHM 867


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,278,481
Number of Sequences: 53049
Number of extensions: 371473
Number of successful extensions: 681
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)