Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312F03f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF010315-1|AAC39533.1|  177|Homo sapiens Pig11 protein.                32   1.1  
AY358192-1|AAQ88559.1|  118|Homo sapiens GLSH6409 protein.             31   2.4  

>AF010315-1|AAC39533.1|  177|Homo sapiens Pig11 protein.
          Length = 177

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = -1

Query: 125 PAPHSTPTCCSALRSPRRISGNHRR*VHCLLL 30
           P P   P CC AL  PR  + +HR   HCL L
Sbjct: 127 PLPKELPPCCRALVWPRATTASHRH--HCLPL 156


>AY358192-1|AAQ88559.1|  118|Homo sapiens GLSH6409 protein.
          Length = 118

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +1

Query: 142 LLFSLFPHTCTLQRILLPLHNTFYLSLVSSVTYR 243
           L F +FP +C L  + LP H+ F +SL+ S++ R
Sbjct: 50  LTFPIFPISCDLFLLSLPPHHPFLVSLLLSLSLR 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,449,352
Number of Sequences: 237096
Number of extensions: 1003616
Number of successful extensions: 1997
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1997
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)