Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312F01f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      61   3e-11
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        24   3.6  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   6.2  

>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 60.9 bits (141), Expect = 3e-11
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -3

Query: 519 NLCAIHAKRVTIMPKDIQLARRIRGERA 436
           NLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 109 NLCAIHAKRVTIMPKDIQLARRIRGERA 136


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -3

Query: 519 NLCAIHAKR 493
           NLCAIHAKR
Sbjct: 107 NLCAIHAKR 115


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = +2

Query: 29  IYLTPNTQLHIMNQFKHRLLTR----MCGLEILPNN 124
           IY+ P T  H + + KH L  R    +   +I+PNN
Sbjct: 286 IYVIPITTRHFIYEIKHPLRLRGDILVRCYQIIPNN 321


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,425
Number of Sequences: 2352
Number of extensions: 7624
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)