Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312E07f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3620|AAF56330.3| 1954|Drosophila melanogaster CG6875-PA...    58   7e-09
U95171-1|AAB51540.1| 1861|Drosophila melanogaster microtubule as...    31   0.72 
BT024362-1|ABC86424.1|   81|Drosophila melanogaster IP07966p pro...    31   0.95 
AY119516-1|AAM50170.1|  551|Drosophila melanogaster GH14470p pro...    31   1.3  
AE014297-1458|AAF54756.1|  551|Drosophila melanogaster CG4810-PA...    31   1.3  
AY118686-1|AAM50546.1|  551|Drosophila melanogaster AT15038p pro...    29   5.1  
AJ289882-1|CAB96574.2|  959|Drosophila melanogaster dumbfounded ...    29   5.1  
AF196553-1|AAF86308.1|  959|Drosophila melanogaster KIRRE protein.     29   5.1  
AE014298-492|AAN09598.1|  956|Drosophila melanogaster CG3653-PB,...    29   5.1  
AE014298-491|AAF45847.2|  956|Drosophila melanogaster CG3653-PA,...    29   5.1  
M55533-1|AAA28305.1|  564|Drosophila melanogaster 5HT-dro seroto...    28   6.7  
AY118491-1|AAM49860.1|  564|Drosophila melanogaster LD04507p pro...    28   6.7  
AY095074-1|AAM11402.1|  397|Drosophila melanogaster RE21802p pro...    28   6.7  
AE014298-1368|AAN09614.1|  397|Drosophila melanogaster CG1354-PD...    28   6.7  
AE014298-1367|AAN09613.1|  397|Drosophila melanogaster CG1354-PC...    28   6.7  
AE014298-1366|AAF46520.2|  397|Drosophila melanogaster CG1354-PA...    28   6.7  
AE014297-4690|AAF57104.1|  564|Drosophila melanogaster CG12073-P...    28   6.7  

>AE014297-3620|AAF56330.3| 1954|Drosophila melanogaster CG6875-PA
           protein.
          Length = 1954

 Score = 58.0 bits (134), Expect = 7e-09
 Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
 Frame = -2

Query: 511 FEIETTPEHVKRARRTACKSEESPKEECPRLVLAPFSRPPQVVFDNVIIGTTCERNLEVI 332
           FEI  TP  +K+ +R   +       E   +V+APFS    V F++V I  T  R + V+
Sbjct: 4   FEITVTPSRLKQKKRAEGR-------EPAVVVMAPFSAKAIVQFEDVPITKTARRQVRVL 56

Query: 331 NPTKQPQHITLGKALPPGLIVHIPGEWLE-VEPESCNI-LTMVWTPNQPTAVRETLNFTN 158
           NP+     + + KA+     + +  EW+E   P    + + +VW+P    A +ETL   +
Sbjct: 57  NPSDDDIEVKVMKAIREEHNLSL--EWMEHTVPARDEVSMELVWSPVLEVACKETLQLID 114

Query: 157 ENHRRHDVIVLLKSVVN 107
             + R +V+++LKS  N
Sbjct: 115 NRNFRKEVMIILKSKSN 131


>U95171-1|AAB51540.1| 1861|Drosophila melanogaster microtubule
           associated protein protein.
          Length = 1861

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -2

Query: 220 LTMVWTPNQPTAVRETLNFTNENHRRHDVIVLLKSVVN 107
           + +VW+P    A +ETL   +  + R +V+++LKS  N
Sbjct: 1   MELVWSPVLEVACKETLQLIDNRNFRKEVMIILKSKSN 38


>BT024362-1|ABC86424.1|   81|Drosophila melanogaster IP07966p
           protein.
          Length = 81

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -2

Query: 157 ENHRRHDVIVLLKSVVNVKGKTNQSKGFKISPGKMKRKSSKK 32
           E ++RH VI + K +  V+GK  + K  K    K K+K  KK
Sbjct: 40  ERNKRHHVIKISKILKCVRGKKKKKKKKKKKKKKKKKKKKKK 81


>AY119516-1|AAM50170.1|  551|Drosophila melanogaster GH14470p
           protein.
          Length = 551

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 455 IRRITQRRMSPFGVSSVLQTSTSCVRQCYHWYNL*EKLGS 336
           IRR+++   + F    +L T   C R  Y W  + EKLG+
Sbjct: 240 IRRLSRTMGNVFATDEILSTIMCCTRSNYSWDVVVEKLGT 279


>AE014297-1458|AAF54756.1|  551|Drosophila melanogaster CG4810-PA
           protein.
          Length = 551

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 455 IRRITQRRMSPFGVSSVLQTSTSCVRQCYHWYNL*EKLGS 336
           IRR+++   + F    +L T   C R  Y W  + EKLG+
Sbjct: 240 IRRLSRTMGNVFATDEILSTIMCCTRSNYSWDVVVEKLGT 279


>AY118686-1|AAM50546.1|  551|Drosophila melanogaster AT15038p
           protein.
          Length = 551

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -2

Query: 160 NENHRRHDVIVLLKSVVNVKGKTNQSKGFKISPGKMKRK 44
           N + + HD IV  + VVN  GK+ QSK   IS G + R+
Sbjct: 349 NVSRQYHDAIVKCE-VVNAVGKSEQSKKLDISFGPVFRQ 386


>AJ289882-1|CAB96574.2|  959|Drosophila melanogaster dumbfounded
           protein.
          Length = 959

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -2

Query: 160 NENHRRHDVIVLLKSVVNVKGKTNQSKGFKISPGKMKRK 44
           N + + HD IV  + VVN  GK+ QSK   IS G + R+
Sbjct: 352 NVSRQYHDAIVKCE-VVNAVGKSEQSKKLDISFGPVFRQ 389


>AF196553-1|AAF86308.1|  959|Drosophila melanogaster KIRRE protein.
          Length = 959

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -2

Query: 160 NENHRRHDVIVLLKSVVNVKGKTNQSKGFKISPGKMKRK 44
           N + + HD IV  + VVN  GK+ QSK   IS G + R+
Sbjct: 352 NVSRQYHDAIVKCE-VVNAVGKSEQSKKLDISFGPVFRQ 389


>AE014298-492|AAN09598.1|  956|Drosophila melanogaster CG3653-PB,
           isoform B protein.
          Length = 956

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -2

Query: 160 NENHRRHDVIVLLKSVVNVKGKTNQSKGFKISPGKMKRK 44
           N + + HD IV  + VVN  GK+ QSK   IS G + R+
Sbjct: 349 NVSRQYHDAIVKCE-VVNAVGKSEQSKKLDISFGPVFRQ 386


>AE014298-491|AAF45847.2|  956|Drosophila melanogaster CG3653-PA,
           isoform A protein.
          Length = 956

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -2

Query: 160 NENHRRHDVIVLLKSVVNVKGKTNQSKGFKISPGKMKRK 44
           N + + HD IV  + VVN  GK+ QSK   IS G + R+
Sbjct: 349 NVSRQYHDAIVKCE-VVNAVGKSEQSKKLDISFGPVFRQ 386


>M55533-1|AAA28305.1|  564|Drosophila melanogaster 5HT-dro serotonin
           receptor protein.
          Length = 564

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 372 TLSNTTCGGLENGANTKRGHSSLGDSS 452
           +L+ +TCGGL +G     GH S G  S
Sbjct: 402 SLTYSTCGGLSSGGGALAGHGSGGGVS 428


>AY118491-1|AAM49860.1|  564|Drosophila melanogaster LD04507p
           protein.
          Length = 564

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 372 TLSNTTCGGLENGANTKRGHSSLGDSS 452
           +L+ +TCGGL +G     GH S G  S
Sbjct: 402 SLTYSTCGGLSSGGGALAGHGSGGGVS 428


>AY095074-1|AAM11402.1|  397|Drosophila melanogaster RE21802p
           protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 168 LRVSLTAVGWLGVHTIVNILHDSGSTSNHSPGICTISPGGRALP 299
           LR+ +  V  +G  T  N+L  S + + + P  CTI P    +P
Sbjct: 22  LRIGIVGVPNVGKSTFFNVLTQSAAPAENFP-FCTIKPNESRVP 64


>AE014298-1368|AAN09614.1|  397|Drosophila melanogaster CG1354-PD,
           isoform D protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 168 LRVSLTAVGWLGVHTIVNILHDSGSTSNHSPGICTISPGGRALP 299
           LR+ +  V  +G  T  N+L  S + + + P  CTI P    +P
Sbjct: 22  LRIGIVGVPNVGKSTFFNVLTQSAAPAENFP-FCTIKPNESRVP 64


>AE014298-1367|AAN09613.1|  397|Drosophila melanogaster CG1354-PC,
           isoform C protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 168 LRVSLTAVGWLGVHTIVNILHDSGSTSNHSPGICTISPGGRALP 299
           LR+ +  V  +G  T  N+L  S + + + P  CTI P    +P
Sbjct: 22  LRIGIVGVPNVGKSTFFNVLTQSAAPAENFP-FCTIKPNESRVP 64


>AE014298-1366|AAF46520.2|  397|Drosophila melanogaster CG1354-PA,
           isoform A protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 168 LRVSLTAVGWLGVHTIVNILHDSGSTSNHSPGICTISPGGRALP 299
           LR+ +  V  +G  T  N+L  S + + + P  CTI P    +P
Sbjct: 22  LRIGIVGVPNVGKSTFFNVLTQSAAPAENFP-FCTIKPNESRVP 64


>AE014297-4690|AAF57104.1|  564|Drosophila melanogaster CG12073-PA
           protein.
          Length = 564

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 372 TLSNTTCGGLENGANTKRGHSSLGDSS 452
           +L+ +TCGGL +G     GH S G  S
Sbjct: 402 SLTYSTCGGLSSGGGALAGHGSGGGVS 428


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,567,975
Number of Sequences: 53049
Number of extensions: 604085
Number of successful extensions: 1853
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1839
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)